BGIOSGA008022

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Revision as of 03:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008022| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008022, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008022

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008022, complete gene.

LocusTag

OSJNBA0010K08.33

Ensembl Transcript ID

BGIOSGA008022-TA

Ensembl Protein ID

BGIOSGA008022-PA

Length

5501

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12495821..12501321

Sequence Coding Region

12495821..12495931,12497194..12497265,12497525..12497614,12497730..12497772,12498014..12498120
,12500112..12500207,12500637..12500827,12500926..12500995,12501214..12501321

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12495821..12501321 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12495821..12501321 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAACTATCCAGGTTCCTAACCCTACCGACCCCGAACTTGCTCAACGGCTTGTTCTTGATCTGCTAGATCCAGATCTCAGAGGGCATGCTCTTGCTGAACTACGCAAGAAAAGGGAGATGTTTCCAGATTTGGCTCCACTATTGTGGCACTCTTTTGGCACAATTATTGTGCTGCTACAGGAGATTATAGTAGTCTACCCTGTCCTTTCACCCCCAACATTATCATTACTTGCTTCAAGTCGAGTCTGCAATGCGCTTGCACTTCTTCAGTGTGTTGCATCCCATCCCGAGACTAGGAGCCATTTCTTAAAAGCTCATATTCCATTGTACCTATGTTCATTTTTGGAAAATACCAGCAAGACCAGACCTTTTGAATACTTGCGGCTGACCAGCTTGGGTGTCATTGGTGCTCTTGTGAAGGCTGAAGGTACAGAAGTCATCAATTTTCTACTGCAATATGAATTTGTTCCTCTCTGCCTGCATGCCATGGCGGTAGGCAGTGAGCTTTCAAAAACTGTGGCAACTTTTATTATTGAAAAGATTGTCTTGGATGACGCTGGGCTTGGTTACATTTGCGCTACTGCTGATCGGTTCTTCGCTGTGGGGACTGCCTTAGCAGGCATGGTGACCTCAATGGATGACAAGCCCTCCCCAAGGTTGTTGAAGCACATTATCCACTGTTACCTTAGGATCACAGACAATCCTAGGGGCTTGGAGGCACTGCAGACTTGCCTTCCTACCACACTTACAGATGGGACATTCAACAATCTTACTAAGGATGACCCTACAATGCAGCAATGGCTCCAAGAACTGTTGGTCAAAGTGAGGAGTGGAAAAATGGGAGGACTACCTCCTCCAGTTCATGGTCACATGCCGAGGGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MSTIQVPNPTDPELAQRLVLDLLDPDLRGHALAELRKKREMFPDLAPLLWHSFGTIIVLLQEIIVVYPVLSPPTLSLLASSRVCNALALLQCVASHPETRSHFLKAHIPLYLCSFLENTSKTRPFEYLRLTSLGVIGALVKAEGTEVINFLLQYEFVPLCLHAMAVGSELSKTVATFIIEKIVLDDAGLGYICATADRFFAVGTALAGMVTSMDDKPSPRLLKHIIHCYLRITDNPRGLEALQTCLPTTLTDGTFNNLTKDDPTMQQWLQELLVKVRSGKMGGLPPPVHGHMPRV</aaseq>

Gene Sequence

<dnaseqindica>1..111#1374..1445#1705..1794#1910..1952#2194..2300#4292..4387#4817..5007#5106..5175#5394..5501#ATGTCAACTATCCAGGTTCCTAACCCTACCGACCCCGAACTTGCTCAACGGCTTGTTCTTGATCTGCTAGATCCAGATCTCAGAGGGCATGCTCTTGCTGAACTACGCAAGGTAATGCATATTTTTCTTCATTATCTATTATAACTATTCTTTTTATTTGAGATTAAAGGGTTGTATTGTTCGTAATTTCATATTTACTCATATAATGAATACAACAGTAAGGTCCCCTTTCTTGGTTCAAGATTTTCAAAAGGCAAATATTTTGCTAAACATTATTGGAAGACATCGGCCTCTCTAGCAGTAGATAGATGCAAAAATCGAGGTTTGAAAGATGGATTGCCTAAAACACATGGAATATATATATATATATATATAGAGGGGGGGGAGGGGGTTGCTAGGAGATCACATGGGCCACGCTTCCACTAGTTGCTTGTGCCAAACCAATGAAACCATGGCAGTGTTGAAAATAGATAATGAAACCATGGCAGTGTTTATGGGATATGCACTCTAGTTTCTTGGCTGTGTTGATTTTGGAAAGAGCGAAAACCTTAATTGCTTTCTCTTCTTCCAGCATTAGAGGACCAACAATGGCTTTTGGAAAAGCCACCAAAAGGATGCCTGTTTTGTCGCAATGTCAAAGTAGACAGCCGAAACAAAATAGATCTAACTAGGAAACTTAAGTAGTATAAACTTATTGCAGCGTAGAAATCCAAAATCACAACAATACAAAATTTACTCACATTATAAACTTCCCTTTTTTTCTTAAATGGAAAGTCAACACATGACCAGAAACGTTGTGCATACTGCATACAAATTCTAAAAAGCTAAAATAACTGACAACATATATAATAAACAAACCAAATATCCTAATTAAGTAAATAGATATCCCCCATTAATAATAACAAACAAAGGAAACAAGAGTCTTTGAACAAAACACAAGAACTAAAACCAACACATAAAGAAGCATAACATTTATATAAAATGGAAATATTTCACTGTATTCCTTAGCAAAGCACTGCTTGAGATAGTGGTACTTGCATGATTTTTTTCATAACCCATGCAAAACACACAACAAATAGCTAGTAGCATCAGCAAAAAGCGGTGGCATGGGATATGTTCTACATCATGGTGGGCCAAAACCCTGGTTAATATGTAAGGTCACTTAACTCTGGGTCCCTGGTGATCTAAGATATTAATTGTTTCTATTATCAATAATATTTTCATAATAATTCACCGAAAAATATTTTTTTTATTTTTATGTTGATTGATTTTGTTGTGGTCCTTACATAAACAATATTCAGTTATTGTCCTATTACATTGTCATACAAAGAAAAATTATGCATTTGTAGTGATGTTGTTGTCTATATTTTTAGAAAAGGGAGATGTTTCCAGATTTGGCTCCACTATTGTGGCACTCTTTTGGCACAATTATTGTGCTGCTACAGGTAACATTCTTGAGTAGTAGTTTATCCATTGTGTTGTATGTCCATGATCAATCTTTTGTTGAGGAGCCCCTCAACACCCCCCCTTCCCCTCCAAAAAAAGAAGTGTTTTAGTCAACCATTCTCCACAATTCAGCAATTAAAACACAATTGAGTTCTATCATATCTCAATTATGGGTTAATGTAATTTATTAATGTTTGAGCTCACTTTTATTTGTGTTAATGGGTACTCATATGTTTTTATTCTTGCTATAATAAATAGGAGATTATAGTAGTCTACCCTGTCCTTTCACCCCCAACATTATCATTACTTGCTTCAAGTCGAGTCTGCAATGCGCTTGCACTTCTTCAGGTACACGCTAAGAAGAATACAACACCACTAGAAAATATTAAAGCTGCTATTTTCCATATATCATATCTTATGTCACCTTTCCTTTTTCTTTTTTACTTTCTTTTCTTTATTGCAGTGTGTTGCATCCCATCCCGAGACTAGGAGCCATTTCTTAAAAGGTAATGAGCACAACCCTTTGTATATCATATCTGAAACTTTTGATGTGTATTGTTAATTATTTTCCATCCTACCTAAATGTTGCGATTCATTATCATGTGGTACTAGATATTCCATAGGTCAGTGTAGGCCTTGCTACCAATCTAGATAGTTTATAGTATTTTTTTTTACTTTCATGGTACAAACCTTTTGAGCTTTGGATTGGTTTGTAACATTCACCCTTTCGATTCTTTTTATTTTCAGCTCATATTCCATTGTACCTATGTTCATTTTTGGAAAATACCAGCAAGACCAGACCTTTTGAATACTTGCGGCTGACCAGCTTGGGTGTCATTGGTGCTCTTGTGAAGGTAATACATACTGGAAACTTTGGCAATAAAAAAATCAGTTATTACTCTGAAAATTCTTTAGCAGGTAATGAAACCTTTTTTCTTTGCATTTAAGTTAAAAAAAAAGGAGGGATAGTTCACTACCTCCACTACAAATGGTAAATGTTTGATTATTCATGAGAAGTGCAATGAACAGTTCACAATTACTTGGTGTATAATAAGAAAATCCTTACTACAAAAAGTAGCGTTCACTGTAATGTTTCTTCTTACTGTCTAAAAGTTTTTGTCATGTATAGCAGGATTTGATGAATTCATATAGTTTATATCCAAAATAACTGGCAAATATATTATCAGCACATGAGACAATTATTAGCATCACTGAGGTTTAATAAATTCAACTGTTTGTTTCAATTCATACCAGTAAAACTAGTATAGATATCTCAATAACTTCTTTAAAATTATTCCCTCTATATTTAAACATATAAACATTATTAACCTTACCCCGTCAAAATTTGACCATCAGTAACCCTCAAAAATGGAATAAATCATATTTGGTATATTCTTCTTTAGAGTAAATTTCAGTGTGGTCCATATATTTTTACCCATGTTGCAGCTTGGATCATATCTTAGCCAAGGTTTTCACTTTGAACCACTTAAACTTACCATTTGTTGTCCAATCTGAAATTTACTCTTTTCGAGTAAATTTCAGTGTGGTCCATATATTTTTACCCATGTTGCAGCTTGGATCATATCTTAGCCAAGGTTTTCACTTTGAACCACTTAAACTTACCATTTGTTTCACTCTAGTCCATCTCTTGTCTTCTCCACGTCCGATGGGCCATCAGAGATGTGGCAACACCATTGCTCCCCCCCCCCCACTCTTTCTCTCTCTGCTATCTGCTGCATCGTGCCCAACTCCAGTGGTTTGATCTGTAGGGAGAAGGAGTAGTGCAGCAGTGCCCAACTCCTGTTGCCTACTTTAGAGGGAGGAGCTAGCGAAGCGTGGGGTCGAGCGCACAGCTGGCACACCAGAGGTGCTAGTGATGGACATTAATGGACTGATGGACCTCGAGCAAGGGAAAGGGTGGACATTGGACAGTTTTGAGCTCCTTAGCTCATCCGGCATCCGCACAAGCATAACTACATAAGCGGTGGCACTGCCGATCCTGATGCATTGCTTTGCTTTGATCTTCTCACGGCAGCTTGACTGCAACATAGCGCCAGCTACAGGCACACGAGTGGCAGAACAAGGCACGTAAGCATCAAAGTTGGTTTCTATTTGAGTCAATTGCCTGGCCATGCGAATCGTCTTGCCAGTTGCCACTGGCCTCTCAACACATAGCACATAGGAGCCATCATTGGTTTGATCTAATCCAGCATGATATATGCCGTTTATCCCCTTATGATCAGTGCTCACCTCATCCTTCACCCTGGGTGAAATAGCCATGGTAGCAGCTCAAGGCAGTACCCCACTACACCTAGTCCAAACTGGTATGTTTTGGCAAGGTTAGATGGTGCTAAGTGAAAAGTGTTGATAGACCCTTGCCCATTGTGCAACTATGGTAATGAAAAGGGGTCCAATCTGAAATTTACTCTTTTCTTTATAAGTACTTTTTATAATTATAATTTTGTTAGATATTATTGCTATATTCTTATATAGAAATAGTGGTCATAGTTGCACACCAAAAATTAAATAAATTCAAGAATGTCGTATATTTAGATACAGAGCTAGTATGAACTTTATGGTTCAGTGATGTATAGTTTGCAGTTGAAGCCAAATTAATTTGTATCTATGGCTAAAATGGCAAAGCCTTGAAAAAGGACCTATAATTTTCTTTATGTACATGCAACATAAGAAACCTTTCTTTCTTTCTTGGGGTGTTCCACAAACATGCCTATGAAAAATGAAAATGAAGCTTCTTTTGCTTTTTTTTAGATAATGGATTAAACCGGCCTCCACATCGAAACGGATGTACATAGCCATAAGCTTCTTTTACTTGTGATACATGCAGGCTGAAGGTACAGAAGTCATCAATTTTCTACTGCAATATGAATTTGTTCCTCTCTGCCTGCATGCCATGGCGGTAGGCAGTGAGCTTTCAAAAACTGTAAGTAACCAGCCATATCAATCCTCTCCTAAAATAACATCACCTTTAATTAATTGTCTTTTAGTATTCTTTCCTATGTAAAGTTTGATAGGAGCACATTTTTATTTTCAGCTAGCATCAGCTCAAAGTATAATTTGTAGCAATTCATTTATTGATATATAGTGATTCTTTGTATACTTTGGGTCTTGCTGTTTTGGAATACTTTGTAGCAATTCATTGATTGATATAATTGTACCAATCTAACAATCTAGATATTGCCATTTTCTTTTTGTTACCTATGTATTAATCATGTATATATCTATGCTAAGTATATCATATATATATTTGCATTTTTATATGTGTGTTTTCAGTGACATACACTTTGATTTCATTCTGGTAAACTTATTAGAAATTGCATCCATTCACTGATTTACTCACCTATATATGCAGGTGGCAACTTTTATTATTGAAAAGATTGTCTTGGATGACGCTGGGCTTGGTTACATTTGCGCTACTGCTGATCGGTTCTTCGCTGTGGGGACTGCCTTAGCAGGCATGGTGACCTCAATGGATGACAAGCCCTCCCCAAGGTTGTTGAAGCACATTATCCACTGTTACCTTAGGATCACAGACAATCCTAGGTTTGTTTCCTCACTTTCATTTTGCAGAATTATCTTCATTTTTCAAACTTCTAAAGCCAGCGATGCCATTTCGATCTACCTCCTCTGCAATGTTCCAGGGGCTTGGAGGCACTGCAGACTTGCCTTCCTACCACACTTACAGATGGGACATTCAACAATCTTACTAAGGTGAGTTGTGTATTGTAGATATACATTTTCACTAAAAATTACTACTACTTCCATCCCCAAATTATAATAATTTTTAGCTATGTACCTGGATGGACAAGATATACAACCAGAATTTATTATATTTTGAGGTAGTATGTATCATCCAACTGAAGTACTATTAGACTAGGCTGATAATTGCAATCAACTCTGAATATAAATTTGTTTTACTACAAATGCAGGATGACCCTACAATGCAGCAATGGCTCCAAGAACTGTTGGTCAAAGTGAGGAGTGGAAAAATGGGAGGACTACCTCCTCCAGTTCATGGTCACATGCCGAGGGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008022

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