BGIOSGA008025

From RiceWiki
Revision as of 03:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008025| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008025, complete gene.| tag = OsI_068...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008025

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008025, complete gene.

LocusTag

OsI_06871

Ensembl Transcript ID

BGIOSGA008025-TA

Ensembl Protein ID

BGIOSGA008025-PA

Length

3810

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12540488..12544297

Sequence Coding Region

12540488..12540835,12540930..12541148,12542083..12542142,12542243..12542492,12542710..12542814
,12543877..12544003,12544165..12544297

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12540488..12544297 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12540488..12544297 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCAGCGCGGTGGCGGCGCACCTGTCGCGGGAGCTCCCCTACGCCGTCTCGCCGGCGGACGTGGTGCTCACCGCCGGCTGCAACCACGCCGTCGAGATCATGATGTCCGTGCTCGCGTCGCCGGGCGCCAACGTGCTGCTCCCGCGGCCCGGCTACCCGCTGTACGCGTCGCGCGCCGCCCTGAGCGGCCTCGAGTTCCGCCATTTCGACCTCCTCCCCGACAGCGAGTGGGAGGTCGACCTCGCCGGCGTCGAGGCCCTCGCCGACGCCAACACCGTCGCCATGGTCATCGTTAACCCCAACAACCCCTGCGGCTGCGTCTACTCCCGCGACCACCTCGCCAAGATCGCAGAGACGGCGAGGAAGCTGGGGATAATGGTGATCAGCGACGAGGTGTACGACCACTTCGCGTTCGGGAGCAAGCCGTTCGTGCCGATGGGGGTGTTCGGCGACGTGGCGCCGGTGATGACGCTGGGCGGCATCTCCAAGCGGTGGATGGTGCCCGGCTGGCGCCTCGGCTGGATCGCCGCCACCGATCCCAACGGAATCCTCAGGAACAAGAAGATCATCGACTCAGTCATTGACTACCGAGCCATCTCGGTAGATCCCGTAACATTTGTTCAGGGAGCATTGCCCGACATCCTCGCGAAGACGGACGATGCGTTCTTCACCAATGCCCTTGGGGTGGTGAAGAAGGCGGCGGAGATATGCTACGAGAAGCTCAAGGAGATCGACTGCATCACCTGCCCTCACAAGCCGGAGGGCTCCATGTTCGTCATGGCGAAGCTGGACCTGTCTTCCCTAGATGGCATAGAGGACGACGTCGACTTCTGCAGCAAGCTGGCCAAGGAGGAATCCGTGGTCATCTGCCCAGGGAGTGGATTAGGGATGAAGAATTGGCTCCGGATAACCTTCGCGGTTGATCCACAATTACTAGAGGATGGTCTAGAGAGAACCAAGTGTTTCTGCAAGAGGCATGGAAAGGCAAGAGACTTTGCCTTATGTATTAATAGAGGAGGGCATGGCCTCAAAGTTTATGTAAAAGGGTTGCTTAAAGAAAGTGACAGCCGGCAAAAAGGAAAGGGAGAAGGCTTACTCTCCCGAAGGGGCTTCTTCGGTATTCCAGGAATTGAAACGAATCCCTCCCACCTTTATGTACAAGGCTTGCTTAAAGAAAGTGATAGCGCGCAAAAAGGAAAGGGAAAAGGCTTACTCTCCCGACAGTACAAACTCAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MCSAVAAHLSRELPYAVSPADVVLTAGCNHAVEIMMSVLASPGANVLLPRPGYPLYASRAALSGLEFRHFDLLPDSEWEVDLAGVEALADANTVAMVIVNPNNPCGCVYSRDHLAKIAETARKLGIMVISDEVYDHFAFGSKPFVPMGVFGDVAPVMTLGGISKRWMVPGWRLGWIAATDPNGILRNKKIIDSVIDYRAISVDPVTFVQGALPDILAKTDDAFFTNALGVVKKAAEICYEKLKEIDCITCPHKPEGSMFVMAKLDLSSLDGIEDDVDFCSKLAKEESVVICPGSGLGMKNWLRITFAVDPQLLEDGLERTKCFCKRHGKARDFALCINRGGHGLKVYVKGLLKESDSRQKGKGEGLLSRRGFFGIPGIETNPSHLYVQGLLKESDSAQKGKGKGLLSRQYKLS</aaseq>

Gene Sequence

<dnaseqindica>1..348#443..661#1596..1655#1756..2005#2223..2327#3390..3516#3678..3810#ATGTGCAGCGCGGTGGCGGCGCACCTGTCGCGGGAGCTCCCCTACGCCGTCTCGCCGGCGGACGTGGTGCTCACCGCCGGCTGCAACCACGCCGTCGAGATCATGATGTCCGTGCTCGCGTCGCCGGGCGCCAACGTGCTGCTCCCGCGGCCCGGCTACCCGCTGTACGCGTCGCGCGCCGCCCTGAGCGGCCTCGAGTTCCGCCATTTCGACCTCCTCCCCGACAGCGAGTGGGAGGTCGACCTCGCCGGCGTCGAGGCCCTCGCCGACGCCAACACCGTCGCCATGGTCATCGTTAACCCCAACAACCCCTGCGGCTGCGTCTACTCCCGCGACCACCTCGCCAAGGTTTTGATTGATTAATACATCTGATCAAATCAATTCGGATCGGCGATGATGACAAATCGTAATACATAACCGGATTAATATCTGTACGTACTAGATCGCAGAGACGGCGAGGAAGCTGGGGATAATGGTGATCAGCGACGAGGTGTACGACCACTTCGCGTTCGGGAGCAAGCCGTTCGTGCCGATGGGGGTGTTCGGCGACGTGGCGCCGGTGATGACGCTGGGCGGCATCTCCAAGCGGTGGATGGTGCCCGGCTGGCGCCTCGGCTGGATCGCCGCCACCGATCCCAACGGAATCCTCAGGAACAAGAAGGTGCTTAATTTGCTTGCTGTCTAAATTTCTCAATTAGCCAGAATCATGGTTTTAAGGGCCTGTTAATTGGATGGTTGCCTCCTCTTGCCGCACTTCAAGTTAGGCGTGCCATAGATAGTTAGCCCACTGTTTGTTTGTTTATTGCACCTGAGGCTACCGCATAAAATTCAACGGCGATGAACTACTCTACCGCATGTTTCTTCACTGAATGTGTGGCGCTTAAATCGTCCGCCACACTTGTTAAGTTGAGGGCGCTTAAATAACCAACCAAACATGCCCTAAATCCCTGGTTATAACTGTTTGAGAAGGATCTACTCTCTTCGTTTCAGGTTATAAGATGATTTGACTTTGGTCAAAGTTAAACTACTTAAAGTTTGACTAAACTTATAGACAAATATAGTAATATTTATAATACCAAATTAGTTTCATTAAATCAATAATTGAATATATTTTCATAATAAATTTATCTTGGGCTAAAAATGTTATTATTTTTTTCTTCAAACTTAGTCACACTTAAAGCAGTTTGACTTTGACCAAAGTCAAAACGTCTTATAACCTGAAACGGAGGGAGTAGCTATTTACTCTCATATACAATTTAGCAACTATAGCCTCATTTAGTCCACTATTGTTTGGGAGAGCTTTTGGCAGCTACAGCTTCTCCTAAAATCTCTAGCTGCCAGAAGCTCCTAAAAAATACATATTTTTACTCAGATTCTGATCGAGAAGCTATAGTTAAAGAATCCAGAAGCTAGGAGCTTCTTCAGATTCTCACCAGTTGCTCCCCCCCCCCAACCCACAAATAGAACCTAGCTATAAATGCATGAGAAGTTCAACCACTAAATATCTTAGCCCGCTATTTAAAACACTAGCCAGAATGCAATTGATTTGAAAAACTTGATCAACTGCCTCATGGATCATTTCTCTGTCTCCACAGATCATCGACTCAGTCATTGACTACCGAGCCATCTCGGTAGATCCCGTAACATTTGTTCAGGTCAGTACACATCCAAATTCAGTTGTCGCGCATCTTCGCTTCTCTGAAGATCAATTAATTAGCTGTGACGATGACGCCATGGAAATGATCGATCGAGCAGGGAGCATTGCCCGACATCCTCGCGAAGACGGACGATGCGTTCTTCACCAATGCCCTTGGGGTGGTGAAGAAGGCGGCGGAGATATGCTACGAGAAGCTCAAGGAGATCGACTGCATCACCTGCCCTCACAAGCCGGAGGGCTCCATGTTCGTCATGGCGAAGCTGGACCTGTCTTCCCTAGATGGCATAGAGGACGACGTCGACTTCTGCAGCAAGCTGGCCAAGGAGGAATCCGTGGTCATCTGCCCAGGTAATTACAGTAATTAGAACATCAGTTTAATTTACTGGTTTTGGTAAATTATGGATATGTTTCTGTAGATCATCTGATGGTTGTGTTTCTGTCACTGAACGCATTTCAGTGTCAGGAATGACCTGACCATTTTACTCTGTCTGAATTTTGCCGCGACTAGTATGTATTTTCAGATAATGGAAGATGAATAAAACAGTGTAAATGTAATTCACTGCAGGGAGTGGATTAGGGATGAAGAATTGGCTCCGGATAACCTTCGCGGTTGATCCACAATTACTAGAGGATGGTCTAGAGAGAACCAAGTGTTTCTGCAAGAGGCATGGTAAAATCAAGGAAGCCAGCTAGCTCGTGAATAGTTTCAGGCTTTCAGCATCCGTACTCATGGATGTGTTGTACCGGCATCATGTGAGAATAAAAGTTGAATCAAGTTGGACACTTAAATCAGCACGCATTGTGTCGTCAAATTCGTCAATAGTTTCAGGCTTTCAGCATCCGTACTCATGGATGTGTTGTACCGGCATCATGTGAGAATAAAGTTGAATCAAGTTGGACACTTAAATCAGCACGCATTGTGTCGTCAAATTCCTCAATCGAGGAACTTGTGTATCTTATTAGTTATTATATATTCGAAATCAAATTTAAGTTCACGAGACATTGCATTTTTCATATGAATATGGCTCATGCATATATATATTTGTGATAAACTTTGTTGCCAGTTGATCAGTCCAGATAGTCAACATTTTTTTGGACACAGTGTTCAGCTTGGGGCACCAAATTTCTGATGATGATGACGCGTCCACCGTGCTGACCATCGGATCTCCGCCATCTCGCTTCCTCTCGGTGGGCCTTTGCATACGGAGGTAGCTTCTAGTGGGCCGACAACCCTGTGCAGGCCCAAATTTGGATACGGAGTTAGCGGTAAACATATTGTGGTCCCGGTATAATCTGATTTGTACCATATCGTTAGCATTGCAAGTTTATTACGTCGTTATAAGGTGCCCTCCACGGATACGGGGCACCACCTGATATGGGTGGTTAGCAAACAATCCTTATATTGTTATATGGTATATACAGGATAGTCTGCTTGGAAGGGCACATGACACATGTGCATGGCATTTTTTGCATTTATATTCTTTCTTTTCTAGTATTATTTTCGGGCTTATTTTTTTAAATGCTTTACGGCTACAATTTTTTTTTCAAGAAAAAGTTCTGGACTATAAAATCCAACACTGAAACTTCTTTGTGAACTTCAATGAAATTCATGGGAAAGTAAGTTTAATTAGTAAAGAAAAACCCAATCGTAATTAAAAAAAATGGACTTGCTGCACAACCGTCGGTTGTTTTATTTTGATTTGTCAACCAGATTTTTCTTTTTCTTCTGAAGGAAAGGCAAGAGACTTTGCCTTATGTATTAATAGAGGAGGGCATGGCCTCAAAGTTTATGTAAAAGGGTTGCTTAAAGAAAGTGACAGCCGGCAAAAAGGAAAGGGAGAAGGCTTACTCTCCCGAAGGTACAAACTCAGTCAGGCATCGAGCGCCTGCCCTATACGCAGCTCCATCTTTGATGGCCTGGATCAGAGCAGTGGGCGTTTGCGTCGTATTCCGGAAGATCCTTGCATTTCTTTCGTTCGATCTATAGTATCCATGAAACCATGATGATCAACGTTTTTAGGGGCTTCTTCGGTATTCCAGGAATTGAAACGAATCCCTCCCACCTTTATGTACAAGGCTTGCTTAAAGAAAGTGATAGCGCGCAAAAAGGAAAGGGAAAAGGCTTACTCTCCCGACAGTACAAACTCAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008025