BGIOSGA008053

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Revision as of 03:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008053| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008053, complete gene.| tag = OsJ_064...")
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Gene Name

BGIOSGA008053

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008053, complete gene.

LocusTag

OsJ_06435

Ensembl Transcript ID

BGIOSGA008053-TA

Ensembl Protein ID

BGIOSGA008053-PA

Length

5477

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13207478..13212954

Sequence Coding Region

13207478..13207621,13207712..13207797,13207930..13208013,13208098..13208236,13209255..13209326
,13209423..13209520,13209665..13209751,13209822..13209897,13210006..13210299
,13210794..13210933,13211019..13211207,13211296..13211386,13211474..13211600
,13212415..13212522,13212612..13212702,13212945..13212954

Genome Context

<gbrowseImage1> name=IndicaChromosome02:13207478..13212954 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:13207478..13212954 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTCAAGAGGAGAGATGAAGGAGCTGAAGAAAGCTTTGTCAAACCACTGCAACTTAAGGTGAAGGATTACCCTTTACTTGGAGTCCATGTCTCGGAATGCCAGATCTATGACCTAGAGAACCGCATGATCTGTTACCAGACAAGAAGAGATTTCACAATGATTAGCTCTCAGCACAAGAGGAGGCCATGTGAAAATAAATACTGTCGTGAGTACCTGGTGAACATATGCAACCAGAGTGCAGAAGGGGTGGCGCAGAAGGTCTGGAACTTCTCCAAATGCAGGGGCATGTGTAGTTACCGTTTATACAGAAAGAAGAATTGGGAGATGCTGGCAGAGATACTGGATCATGCTGTCAATACGTTGGGTTACACTTCCGTCCATAAATTGTTGAACAAGGGTTCATATGTGGTGGCTGTTGCAGAGATGTTGACATCAACCCCTCTAGAGATCTGGGATCTCCGTTTTGCCCAAGCACTTTCTTCCATGGAAATTGTGATGGCTGGCAAGGCTTGCCACCAGTGCCGTCAAATGAAACGAAACTTTGCAGTGGCATGCACGCAGGTTAAGAAGAAGGGGGTATGCCCAATAAAATACTGCCATAGGTGCCTTCTTAAGAGGTATGATGAGAATGACGAAGAAGTGGGACAGATGGAAGCCTGGATCTGCCCAAAATGTAGAGGCATCTGCAACTGCAGCTGCTGCAGAAGGAAGAAAGGACAACAACCCACAGGGAGATTGGTCCACACTGCCAAGAAAGGAGAACAAGGGGCTGCCGATGAGGAAAGCACAGGTAGATCCCTTCGGATAGAGAATTCTGTTGAAGAATTGCTGGTCGAGGGGGATCAAATAAAGCTGAAGGGCAACATTGTGGTGAATAAAAATTTTGATGGTGAAAGCTCCTTGGCTAAAGACAAAAATGGATCTATATTGGGCTATAATAGCGCAGTTTCTTCACCCAATAAAAAAGTGCTTCCAAGGGGTAGTCTGGTCACTAACATTCTAGGTGCAGATCTGGAGGTGAAAGATGTTGGACCAGCAATTCAGTTATACGAGTTCTGCAATTCATTTGGCGAGATTTTCCAGATAAGGAAGGGCCAACCTGAACAAATTCTACAAGACATAGAAAGAGATCAAGAGGTTGAAATAGTACCTGAGCTTATTGCTGACTTTCACAAAAACTTGCTATCGGTCATCAAAGAAGACAGAGGGGAGAAGAATTCAATCTACATAACAAATGGAGATGCATGGTTAAATGATTTAGGTGCATATATCAATGAATTGGCATTTATGTCAAAGGAATTGCATCTTGAATTTGTAAACAAGGGAACATTGGGATACAACAAGCTGAGTCCTTGTAAGCTGCACGTACTTAATTTACTTTGCGATGAGGCCCTCTCTACCGTAAAGTTAAGAAAATTGATTGAAGAACAAAATGGAAGGGCAGCTGAAAGAAGGAACGATGCCAAAGCAAAACTGCGGGCTGCAAAAGCAAAGGAAAAGGAACTAAGAGAAGGGTTAAAGAATGACATGAAAGAAGGAGCAACCCCTATTGAAGGAAACAGAAATCAGCTTATTTCTGATATAAAGAAGGCAAAGGAAGTCAAGCTGACAGCCATAAAAGAGAAGAAGCTGGGAACTGTCCTTAGGAGCAAGCCTTTGATGTTAGAGGACAGGGAGGCATACTGGAAGCTGGATGGCTATTCGAACAACAAGATGCTATTGCTGCAAGAATTTGATAATGAGAATTTCACTGGAAATGACATCTGGTTTGAGTTCACTGAAGATGAAGAAAAAACAATTGAAAATCATGCAGCCATAAGGGATCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MDLKRRDEGAEESFVKPLQLKVKDYPLLGVHVSECQIYDLENRMICYQTRRDFTMISSQHKRRPCENKYCREYLVNICNQSAEGVAQKVWNFSKCRGMCSYRLYRKKNWEMLAEILDHAVNTLGYTSVHKLLNKGSYVVAVAEMLTSTPLEIWDLRFAQALSSMEIVMAGKACHQCRQMKRNFAVACTQVKKKGVCPIKYCHRCLLKRYDENDEEVGQMEAWICPKCRGICNCSCCRRKKGQQPTGRLVHTAKKGEQGAADEESTGRSLRIENSVEELLVEGDQIKLKGNIVVNKNFDGESSLAKDKNGSILGYNSAVSSPNKKVLPRGSLVTNILGADLEVKDVGPAIQLYEFCNSFGEIFQIRKGQPEQILQDIERDQEVEIVPELIADFHKNLLSVIKEDRGEKNSIYITNGDAWLNDLGAYINELAFMSKELHLEFVNKGTLGYNKLSPCKLHVLNLLCDEALSTVKLRKLIEEQNGRAAERRNDAKAKLRAAKAKEKELREGLKNDMKEGATPIEGNRNQLISDIKKAKEVKLTAIKEKKLGTVLRSKPLMLEDREAYWKLDGYSNNKMLLLQEFDNENFTGNDIWFEFTEDEEKTIENHAAIRDP</aaseq>

Gene Sequence

<dnaseqindica>1..144#235..320#453..536#621..759#1778..1849#1946..2043#2188..2274#2345..2420#2529..2822#3317..3456#3542..3730#3819..3909#3997..4123#4938..5045#5135..5225#5468..5477#ATGGATCTCAAGAGGAGAGATGAAGGAGCTGAAGAAAGCTTTGTCAAACCACTGCAACTTAAGGTGAAGGATTACCCTTTACTTGGAGTCCATGTCTCGGAATGCCAGATCTATGACCTAGAGAACCGCATGATCTGTTACCAGGTGAGCAATCTCTTTAGCTTCTATGGTGCACTATGGATCTGTTTGGTGGTTTTTATTCCATTCAATATTTTCCCTACTGCTATACCTCAGACAAGAAGAGATTTCACAATGATTAGCTCTCAGCACAAGAGGAGGCCATGTGAAAATAAATACTGTCGTGAGTACCTGGTGAACATGTACGCAATTTATCCCCTTTTTTTATTGGTGTAATTTCTCTTATGTCTTTTTGGTAATTATCTGTGTGTTTCAACAACATAAGAATCTCTGAGCATCTTGCTCTGCTCTCCATTTGTTTTTTATCTGTTCAGATGCAACCAGAGTGCAGAAGGGGTGGCGCAGAAGGTCTGGAACTTCTCCAAATGCAGGGGCATGTGTAGTTACCGTTTATACAGGTAAGCCATGTGAAGAACATGCATGCCATGGTAGATTATAATTTTAAGGTTAGATACTTAGATTTGATCCTTTTAATTTTGTAGAAAGAAGAATTGGGAGATGCTGGCAGAGATACTGGATCATGCTGTCAATACGTTGGGTTACACTTCCGTCCATAAATTGTTGAACAAGGGTTCATATGTGGTGGCTGTTGCAGAGATGTTGACATCAACCCCTCTAGAGGTGAAGTCCAAATGATATTTTCTTCACAAGTAACACAACCTTCTGGATTGTATATTTATTTTTTTAGAACACGCAGGAGATCTGTGTATCATTTCATTAAGATAGAGGGAAAATGATTGCATATTTAAAGGCATTGCCAAGTCCAAAGAAACAAATCATAATATCTAGTTGGTGGGTTATTTGTCACTTCTACTAAATTAATTATAGATACATCCAATTTGTTAAAAGCAGTGTATCCTGTAGATATATATTTGTAGTCAAAAGATGCAACAAGCTCTCTTTCGCATGTTGTTTATTCATAAAGCCCATAGCATCGTTGCAAACTTGCATCGCCGCTTGCTTTTTTTATCATATATAGTCTATTAATCTTTCTCTTGGGAAGTATCAAAGGTGTAAACTTAAAATTTTACTTATTTTATTGTTTGCCCCAAAGAAGAAATAGAACCAATTAATTTATAAGCTATGCTAGGCATGAAAACATTACATTGTGTAGTTCTTTTCGAAAAAGAGCATCATCTTCTTTTAGAATGATTTAAGACCTGACCAATTAAGGAGATACAAAAATAGAAATCACATGTAGATTGGTTGCTGTCACATTTAATGATAGAAATAAGTTAGATAAATCCAGTTCTTTTGAAAGCACTTCAATCCTATAGATACAATAGAAATAATATAGAAGATTGCCTGGTCGCAGTACTCACACTTCTAAGCGTGTTAGATGATGGTTGAACCACTTCACCGTAAAATATATAGCCATGGCTCTAGGCCTTTCCACACTCCAAAACTGAAAAGAGATAGTTTAGGAGGGATTTACTAGTTACAAATTTTAGGAGGGATTTAAATCATTTACATCTGTTACAAGCAGCTTACCATTTATGCTTCCAGATTTGCACATTAAATGTATTTGACAAAAAAAGATTTGTACATTAAATGCCTTCCCTTTTCACACCTATGAAATTAAATATATACACATTCTTGGAACAAGTTGTGAACAAGTTCATTTGACTTTACATCACAGATCTGGGATCTCCGTTTTGCCCAAGCACTTTCTTCCATGGAAATTGTGATGGCTGGCAAGGCTTGCCACCAGGTAAATGACCTAAGTTGTCTTTCCTTTTGCTATTCTATTGTTGTTTGGGTCACATGGTGTATGTCTTAACGTTTGATTTCTCCGTTTGATCCACAGTGCCGTCAAATGAAACGAAACTTTGCAGTGGCATGCACGCAGGTTAAGAAGAAGGGGGTATGCCCAATAAAATACTGCCATAGGTGCCTTCTTAAGAGGTAAGAATTTTCTTCCCTCTATTTTCTTGGCAGGTGAGATTTTCCTTCATAGTTGAAGACACTCACCATCTCCACAGTGGAGGAAACTGATTTTCTAAGAATATATCAATCTACTTGGCTTTGGTTTGTGACTAATTCTTTTAGGTATGATGAGAATGACGAAGAAGTGGGACAGATGGAAGCCTGGATCTGCCCAAAATGTAGAGGCATCTGCAACTGCAGCTGCTGCAGGTAAGCCATCAGAAGCTGATATGGAATGGTAATCAATAGCTGCTGCAGCTTACTTTGTTTGGCATGGCAGAAGGAAGAAAGGACAACAACCCACAGGGAGATTGGTCCACACTGCCAAGAAAGGAGAACAAGGGGCTGCCGATGAGGTATTATATTTGTTTTTATTTGGCAATACATATTATATTTAACTGTTTGTCAATTCTTTGTTGTATGTTGCTGGTTCATTATGGTTAACAATTGTAATGAACAAGCAGGAAAGCACAGGTAGATCCCTTCGGATAGAGAATTCTGTTGAAGAATTGCTGGTCGAGGGGGATCAAATAAAGCTGAAGGGCAACATTGTGGTGAATAAAAATTTTGATGGTGAAAGCTCCTTGGCTAAAGACAAAAATGGATCTATATTGGGCTATAATAGCGCAGTTTCTTCACCCAATAAAAAAGTGCTTCCAAGGGGTAGTCTGGTCACTAACATTCTAGGTGCAGATCTGGAGGTGAAAGATGTTGGACCAGCAATTCAGTTATACGAGTTCTGCAATTCATTTGGCGAGGTAATTGAACCAACAACCTTATTAATAGCATGGCGACACATGTCTTATTATGACAACATCTTGCTAGCATACACAGACAGTTGAATTAATGTAATGTTTCTTAGTAAAAGAAATTTATGTGACTCCAACTAGACACATTTTTGCTTCTCACCTAATAGATAATATCATGGACTCCATATTTTTCACTTCACTATCCTAGTTATATAAAAATACAATACATCTTAAAGAATCGGATTTCTTATTTGTCCTAACTCTTTCTTTGTATGCGCAAATATCCAACAATTCCATGTATACTAATTCGAACCGGTTGGCTCAAGCCGAAATTCTGTTCATTGAATTAATGGCTGTCTGTCACCAATTGATTTGCAGTTACCAAAGTTATCTCCATAGAAAGTTTTCTTGTTTCTATTATATAATACTGTAAGCTCCTTTATCTTCTATAAATTATATTTTGTATTCTAAATGGAATGACATATAGGATGATTTTGATGCAGATTTTCCAGATAAGGAAGGGCCAACCTGAACAAATTCTACAAGACATAGAAAGAGATCAAGAGGTTGAAATAGTACCTGAGCTTATTGCTGACTTTCACAAAAACTTGCTATCGGTCATCAAAGAAGACAGAGGGGAGAAGTAAATACCATCCGAATCAAAATTTCCTTCATTTTGTTCAAATTTTTGGTAGTAAATCGATAAAAAAAGGTTATTTTGTTTCCAGGAATTCAATCTACATAACAAATGGAGATGCATGGTTAAATGATTTAGGTGCATATATCAATGAATTGGCATTTATGTCAAAGGAATTGCATCTTGAATTTGTAAACAAGGGAACATTGGGATACAACAAGCTGAGTCCTTGTAAGCTGCACGTACTTAATTTACTTTGCGATGAGGCCCTCTCTACCGTGTAAGTGCTTCTTTACCACATTTACTGGAATGATTCAATTTATTATAGTTTATATTGAATTGTTAACTGTGTCTTAACCTTTGAACAGAAAGTTAAGAAAATTGATTGAAGAACAAAATGGAAGGGCAGCTGAAAGAAGGAACGATGCCAAAGCAAAACTGCGGGCTGCAAAAGCAAAGGTCCTTAATGCTGTCAAGCTTATTACTGTTGTTTAATTACTCACTTGTATTTCTAGTAATAACCAACACGACTATGTCATTTCGCAGGAAAAGGAACTAAGAGAAGGGTTAAAGAATGACATGAAAGAAGGAGCAACCCCTATTGAAGGAAACAGAAATCAGCTTATTTCTGATATAAAGAAGGCAAAGGAAGTCAAGCTGACAGCCATAAAAGGTCTGAACCGTTTGAGAGGACATAGCTACATATCTTTGAACTTGATTTGTTTTAGCTTTATGCATTTTGCCCACAGATCGTAAGGATATTGTTCTGGTCATGCTCACGGACATTGTGCACACATGCAGAGTGCGTATAGCAGGCGGGAGAAAGTCAAGGGGATTAGTTGCTATCTTTTGAAAGAAGGATTTGTTTTCTTTTAATTAGAGATTATGTTAGGGGCGTCCTATAAGAGCATGTTCAATGATAGAGCCTAGTATGGTCATAACTAGTTCTGTCAAAAGGAGTGAAACGTGATAATGTTTTTGATAGATAATTAATAGAACTATATATTGTGTTTGGAAAATAAAGAATGCTCGAATACAAACCAAGAAGGATTCCTTATTATCTTTATATTGTTTTCTTAAATAGAAAATGCATCACATGTAGGAATAAACTACTGAAGCTTTCTGGTTGAGATATCAAAACCTTAGAATAGTCTCCATCATGACACACTGATCAAGTTTTAATTATTTACTTATTTCACCTTCTCTCGTTAAGACAACATTCTTTTACTTGCTGTTTTTATTTATCCTTTTTTTTTTCATATTTAGCTAGTTTGAAGAGTTGAGAGTATGTTTATCTTTCCTGACTATGAATTAACTGAATGGTTTGTCTTTTGTCCTTAGCATTTCAAATGAAACTGTTTTGAGAAGTCCCCTACTTTGATCTTATTGGTACTTCACATCATTCTTTAATGTGTAGTGAGAACTGAACTAAGTACATGTGCTTTACTAATTCTCTTGTTTCATTTCTCACACTGTGCCAACAACAGAGAAGAAGCTGGGAACTGTCCTTAGGAGCAAGCCTTTGATGTTAGAGGACAGGGAGGCATACTGGAAGCTGGATGGCTATTCGAACAACAAGATGCTATTGCTGCAAGGTTTGTTTGATTCTGATTATTGTACAAGAAAATTCAATTTATTCCATGACAAAAGAAAATTGTGATAAATAATGTTGCATTTGTATCAGAATTTGATAATGAGAATTTCACTGGAAATGACATCTGGTTTGAGTTCACTGAAGATGAAGAAAAAACAATTGAAAATCATGCAGCCATAAGGTAAGCAGTTACCATGCTTGTTTTCTTTATTTAAAGATATGCTATCTAATATTTAATTATGCATTGGATCCTGTAATTGTAGCGGAAATTTCATTTTTATCTTGTTTTGTCATGATTTGACAGCTAAGAGTGTAGTATACACCAAAGTTAATTGCTGCATATGTTAGTAGCTTGAACTTTAATGTTTTCTAATAATTAGATTAATGAATGACTATTTGTGTTTAACTTTTATGACTATTTAGGGATCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008053

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008053&oldid=61605"