BGIOSGA008072

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Revision as of 03:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008072| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008072, complete gene.| tag = OsI_069...")
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Gene Name

BGIOSGA008072

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008072, complete gene.

LocusTag

OsI_06971

Ensembl Transcript ID

BGIOSGA008072-TA

Ensembl Protein ID

BGIOSGA008072-PA

Length

4163

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13660399..13664561

Sequence Coding Region

13660399..13660517,13660644..13660788,13661921..13662011,13662488..13662685,13662812..13663047
,13663896..13663963,13664089..13664150,13664428..13664561

Genome Context

<gbrowseImage1> name=IndicaChromosome02:13660399..13664561 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:13660399..13664561 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGCTAGGTCCACCCCTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGATGTATTCCATGGCCGACACCATCCCACGATACATAAGGCTAAAACCAGGCATGGAGGCCCAGATTCCAGAGATTCAGAGCGAGCTGAAGTGCCATCTCGACAAGGTTTCGTGGCTGCCAGATTTCTACGCAATTCCGCCTCAAGTTCAGATTGCTAGCTCCAAAGCCTATCAGCAAGGAAAGATCTATGGAATTGATGCAGCTTCTGGAGCTGCTGTCTTAGCACTTGATGTTCAACCAGGAGAACATGTTCTCGACCTCTGTGCTGCCCCAGGTGCAAAGCTTTGCATGCTTGCAGATATGCTTGGCGGCAGAGGTTCTCTGACTGGTGTTGATGTTGCAAAGCACCGTCTTGCGGCCTGTCGTACGATGTTGCAGAAGTATTCTCTCGGAGATTGTTGTCGTCTCTTTGTTGCTGATGGGACTTCATTTTCTATATTACCTGTGAACTCTAGCTTGGGTAGTGGAGAAGGATCAACTTGTCTTAAGGACAATGGAAGTACATTGTCCGAATGGACTTCAAAGAGATCGTGGAAAGACCGACAAAAGTCTAAAAAGGCAAGAACGGCGGGTTCACCTCATCTAACATCAACTTCAGAACCTGAACTGATATACTATGGCAAACATTCAGGATTAGTTGGGTTACGCAAATGTGATGCTCTTCGTCCATCAGCTGATGATGAAGCCCAGACATCTGGCTATGACAAATTACGCCTTCTCACTAATGGTTTTAAATTATTGAAAACTGGCGGATCACTAGTATATAGTACTTGCAGCTTGACAGTCGCACAAAATGAGAATGTGGTTCAACAGTTTCTTTGCAAACACTCTTCAGCAGAGCTACAAAAGATCGATTCAGCTGACAGTTGGCCTTGCAGAAGTGGCAGCATCTTCAAAACCTTGCGATTTGATCCTGCAACTTCGCAAACGAGTGGCCTTTTTGTTGCCAAGTTCACTAAATTACAGATTTAG</cdnaseq>

Protein Sequence

<aaseq>MADARSTPESLPPAFLEFLQENGLDPMMYSMADTIPRYIRLKPGMEAQIPEIQSELKCHLDKVSWLPDFYAIPPQVQIASSKAYQQGKIYGIDAASGAAVLALDVQPGEHVLDLCAAPGAKLCMLADMLGGRGSLTGVDVAKHRLAACRTMLQKYSLGDCCRLFVADGTSFSILPVNSSLGSGEGSTCLKDNGSTLSEWTSKRSWKDRQKSKKARTAGSPHLTSTSEPELIYYGKHSGLVGLRKCDALRPSADDEAQTSGYDKLRLLTNGFKLLKTGGSLVYSTCSLTVAQNENVVQQFLCKHSSAELQKIDSADSWPCRSGSIFKTLRFDPATSQTSGLFVAKFTKLQI</aaseq>

Gene Sequence

<dnaseqindica>1..119#246..390#1523..1613#2090..2287#2414..2649#3498..3565#3691..3752#4030..4163#ATGGCCGACGCTAGGTCCACCCCTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGATGTATTCCATGGCCGACACCATCCCACGATACATAAGGTGAGGTAGCAGCCTGAGATTAATTCAGACCTACTTATGCTCTCATGAATCACCAGAAGGCTTTCATATTTGTTATTGTCAGTTTACTTGCCTTGCATTGCGTTGAGTTTGCTTTGTGATTCCAAGGCTAAAACCAGGCATGGAGGCCCAGATTCCAGAGATTCAGAGCGAGCTGAAGTGCCATCTCGACAAGGTTTCGTGGCTGCCAGATTTCTACGCAATTCCGCCTCAAGTTCAGATTGCTAGCTCCAAAGCCTATCAGCAAGGAAAGGTGAGAAGACACTAATATCTACTCCCTCCGTACTTATAAAGGAAGTCGTTTAGGACAATGTTTAAATCAAACCTTGGGAATATAAATCATGAATAACTCTCAAATTGTTGAGTTTGAAAATTTAAAAATTATATGAATAGATTTGTCTTGAAAAATACTTTCATAAAAGTATACATATATCACTTTTCAATAAATATTTTTATAGAAACAAGAAGTCAAAGTTGTATTTTGGAGACCGTGTCGCTGTCCAAAACGACTTCCTTTATGAGTACGGAGGGAGTACTTTTGAATCTTTTTTTTTTGGGGGAAGAGCAGAGATATATTACTCAACCAAAGTGTCAGAACAGACTAACTGAGAGATAAAACTGCACGTATCTCCTAACCAAAAATCAGAAACAAAATCTGAACGAGCCTTATTAGCTAGCACATGACTTGCATTGTTCTGGGAGTGGTGAATCTTCTGGATGATGATTTCCCTTTCCCCGGCGAGGAGGTGTTTAACTTCCTGAACAATGTGAGCTTGGACTGATAGATCCTTCTCTTTAGACTGAATGAGCTGGGAGGCCACCAAACAATCAGTCTCCACTACAATGGGCAGCAAAGTCCATTGGATTGCCAAGGTAATTCCCTCCACACAGGATAGGAGTTCAGCTTCTAGGGCATCACTGCATCGGTCCAGCACCCTGCAAGAGGAGAATATAACTTTCCCTGTATTATCTCTGAGAATCATACCAATACCTCCCCTTCCCTCCTGAGCATCAAAAGATCCATCCACATTCAGTTTCATCCACCCTCCCTTTGGCTTTTCCCACTGCATCTTTCTTTTTTTTACAGGCCAGCACAAACGCATTGGATTGTATACTAAGTTAATGGTATCCTAGATTAACCAAATGCTATCTGGTGTTTATGCAATTTTATTTTTATTCTATAAAGTGCTTGCTAGATAATTTATCCTAGGTAGAACTCTTCAAACATCTTACTTTTATGTGCAACAGAGAAAATGTCTCAAGTACTCCTTATAACACAACTTGTACTGTTACAGGATAAAGCTACTGTGCAATCATGTCCTATCATGTGTTCTTTTATTTGCTCCATTGCTTCCTGCTAAGACATTTTGAATACATTTTGCTAGATCTATGGAATTGATGCAGCTTCTGGAGCTGCTGTCTTAGCACTTGATGTTCAACCAGGAGAACATGTTCTCGACCTCTGTGCTGCCCCAGGTAATTAATTCAATATTGTTATATATTGCATCACACCAGTATTTTATCTGTGGCAGATGTCTACCATATATAATAATGGCCCTTTGCCAGACTTTTTTTTTTGCGCCACATGTATTCAGCAGTAATGGAAATACCTAGTTTTCTCCATAAACCACAAGAGTAATTATCTTTCCTGATTGGTTGATCTTTGGGGAAGTAACTGCTTTCTCTGCATCATTGAATTGAACCAAATCTGTTTAGCCCCAAACCTGTAGTTTTATGGATTGGCACAGTCTTAAGTTTGAAATATACGTTGAATTGTATTCTCAAATAGGTTTGATATAGCATTGTTATGTTACATATACATTGTAAAATTGGTGATGGTCAAACTTGAACACCATTTTTGCATGATTGTTTTGTCATGAGTCTGTAGTTTCTGTTAGATTATTTGTTAGTTGCAGAATTATTCTGAATGATGTGCTCACATCATGTGCAAGGTGCAAAGCTTTGCATGCTTGCAGATATGCTTGGCGGCAGAGGTTCTCTGACTGGTGTTGATGTTGCAAAGCACCGTCTTGCGGCCTGTCGTACGATGTTGCAGAAGTATTCTCTCGGAGATTGTTGTCGTCTCTTTGTTGCTGATGGGACTTCATTTTCTATATTACCTGTGAACTCTAGCTTGGGTAGTGGAGAAGGTAATAGTTTGCCTCTTCAAACAGAGTAAAATCCTTGCTTTCTGTCTTATTGCTCGTGGAGCACATGAAAGGGTGTAGTTTCTGTTGACTGTTGAGTAGATGCATCTGGTTGCTTATCTATCACAGGATCAACTTGTCTTAAGGACAATGGAAGTACATTGTCCGAATGGACTTCAAAGAGATCGTGGAAAGACCGACAAAAGTCTAAAAAGGCAAGAACGGCGGGTTCACCTCATCTAACATCAACTTCAGAACCTGAACTGATATACTATGGCAAACATTCAGGATTAGTTGGGTTACGCAAATGTGATGCTCTTCGTCCATCAGCTGATGATGAAGCCCAGACATCTGGCTATGACAAAGTATTCCACAGAAACCTTAAAAGATACTGTCCTTTCTTTCTTCAGTACAATGCTGTTATTTTAGTGTTACTGACTACAAACTAATGCTATTTTAGTTTTTTATCTGTGCACTCTGAACATTTTAGGAAGGAAATGTCTTGTGATTTAGTGTGCTATCTTGAAAAGTTTGAAGACTTAGCCATTCCAAATGTTGCACGCTTCAATCATGACATAAATCTACTGTCTTGTTTAGTCATCAATCACTCAATACATCTTATTCAGAACTACCATATTCCCTTATCCAATAAAGTATTCATGGTTATAACTTTGTGTATATAACATTTTGACTCTTGATAGTTTCCTTTCTATAATTAAGCAGTGCTTCTGTGTCCACCAGAAAAATAACTTGCATGCTCACTAGAGAATCAGCTTGCACAAATATTTAAAGAAGTATATTTAGTAGTGGAGTTTCATGTAGATGCAAATCAGGCCCTTGAACTTCTCTTATTATTGTGTTGTCACTTTGTGAGAGAAATGAAACACTCTTCTTATGCAACATACTTTTCCAGTAGGAATATCCTTTTGCAGTTTATTTCACAGCTTAGATAATATTTTAGTTTGTTATGTTTCAAATGCACACAGGTCCTAGTTGATGCAGAATGTACTCATGATGGATCCATAAAGCACTTTCAGTCTTGATGCAGAAAGAACTGATGACCTGCATCATCTTCAGGTAGTACTTTCAGTCTTGATGCTTGCTTGAAGGGCTGGAAGATGGCACCCAATCAAGCTATGTACATTTTAGATATAATTACTTAATTTCGTTAGCATGTGAGTGCACAATTTCATGAGTTTCATTCGCTGTGCAGTTACGCCTTCTCACTAATGGTTTTAAATTATTGAAAACTGGCGGATCACTAGTATATAGTACTTGCAGGTGAGTAATCTCTTCACATGCAATTCCAATATTTGGTTCCTCCTCAATCGCTTCCCAGCAGTGTAGTCACCTTTTCCTATTGCATTTCGTGTGTCTTAACTACCGATGGCTTTGCGTTGAAATAGCTTGACAGTCGCACAAAATGAGAATGTGGTTCAACAGTTTCTTTGCAAACACTCTTCAGCAGGTACAAAATAGCCGTTCCTCATTTCAGTATTATGTATATCCCTTATATTTTTACTTTGAAGTTGAAGATTGATATTTTTCTCAAATGGACTGATTAAATTGATTGTGGTACTTCTAGTCAGGAAATCTTTAGTAGTGTACTTGTTCTCACTTCTTAGTGTGGTTAAGTGAACCTTACGTATAACAAGATTATTTAGTTTGTCTTAGTTTGTTGAAGTTGTCAAAGTTCAACAGATCTGCCCTGATGATCTTCTGGGATTTCTTTTGCAAACATGCAGAGCTACAAAAGATCGATTCAGCTGACAGTTGGCCTTGCAGAAGTGGCAGCATCTTCAAAACCTTGCGATTTGATCCTGCAACTTCGCAAACGAGTGGCCTTTTTGTTGCCAAGTTCACTAAATTACAGATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008072