Os12g0578300

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0578300| Description = Calmodulin-binding, plant family protein| Version = NM_001190097.1 GI:297729324 GeneID:9267431| Length = 2998 bp| D...")
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Gene Name

Os12g0578300

Description

Calmodulin-binding, plant family protein

Version

NM_001190097.1 GI:297729324 GeneID:9267431

Length

2998 bp

Definition

Oryza sativa Japonica Group Os12g0578300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24129404..24132401

Sequence Coding Region

24130167..24131634,24131879..24132267

Expression

GEO Profiles:Os12g0578300

Genome Context

<gbrowseImage1> name=NC_008405:24129404..24132401 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24129404..24132401 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacagaggaagtggtcaaagaggttatcatagtctcaactcccgaatcatctaaatcgacaagcggcgatttcccggtgaattctcttgaaaatgtggatgtcagcagtgtgccatctgacctgaagaggaaggagaagtcagtgccacattacctgagagcatccactggttcttgccatgacagctgcaaatttggggcacatcattcccctgaacccaagaagtactggcctgttcgtcgcaggcgacatcaggaccgtgccaatgccgggtgcggaaagcaaggccaggatgaaatccagacacaaaaaggcagatccagaaacaaggacctggagctgaagatttgtcttgtgaaagatggtaatgttcatgacaagcctgaattcatcgaggtgaagaagccgcctattgaaatggcatctgacaactctgaaacctcaccatgcgtgcaagatcagttgtcatcagctgaagaatccaaacgtgttgaggatggagctgatctgccatgtggtgatgataaattcttgatccctgatggcaatgctgcatgttttgtggatggagaatcatcagagggagctgtaagcattgagctggagatgccgttggccatccaggacagtgacgcgtctgacgatcatatcgcagatgccatttcgcctcctgaatgtgtgtacaaagctggtgaacagttacttgtggatgacatgtgtgatgatggatcaggaaatgagtgtgcaggttcagagaagaagagcactcagattgtgatggcctccgagaagcgtgaaaaatctgggcatggaactaaatcgaagagtttgtataatgtttcagtaaaaccgaaggtgaaagagacatcgactgcaacgcgaagcaatgcgtcaagccagaaaattgtaagaacattggatcggaaagcttcaggtacaacaattgaaagctccaatggatcaaaggtagtgagagccaccaagttcaatagggacaagaaattcagatctaccgtcgcatcgaatgtaccaaaagtgaaggagatcaaagttacatcaccagctactgtgatggatcaatcttccaaacctactaggcaatcaaagctgaagtccttggttgcaaatgatgctccatctccatcagttaattcagagaaacaaactgacagaaagatgacagtgatgaatgttgccaagaatgctcgtgtttggcaaaagaaggaagaagagaaaataagtccagtgaaactgtctcgttctataaacttgtcatccaagtcccttttgagcataaagatgagagcagtcaagaaagaaaaacctgcttccctagtgaagagcaacaagaaggtgtatggagcagaaaatgctgttgctgacgttaaggagaaaaacctgaagtcagcttcaccaaaagtgagaaaagtagaagttagcaagaaagaaagccgttctcagaaagaaaattctgccactccaagaactgaaaacacaaggcagccaaagtcctcaaccatcccagcgcagtcgcctcgcaagctaactttccgacgaggaaaggtactgaacctacagagcaattcagagtcgagcagcacgccgagacggctccggttcaggcctgcaaagactgtagaagacagcaacaggagcaaagaatccaccagagggagaaggaagagtgacagtgcagcctcttccgggtcaaaagattcaggctcttcgaaacctgaagttgtcatcctgaggcatcaggatgtcagggacaagaagaagaacgagcagggattgttgaacaatgtgatcgaggagacagcgagcaagcttgtgagacgaggaagagcaaggtga</cdnaseq>

Protein Sequence

<aaseq>MTEEVVKEVIIVSTPESSKSTSGDFPVNSLENVDVSSVPSDLKR KEKSVPHYLRASTGSCHDSCKFGAHHSPEPKKYWPVRRRRHQDRANAGCGKQGQDEIQ TQKGRSRNKDLELKICLVKDGNVHDKPEFIEVKKPPIEMASDNSETSPCVQDQLSSAE ESKRVEDGADLPCGDDKFLIPDGNAACFVDGESSEGAVSIELEMPLAIQDSDASDDHI ADAISPPECVYKAGEQLLVDDMCDDGSGNECAGSEKKSTQIVMASEKREKSGHGTKSK SLYNVSVKPKVKETSTATRSNASSQKIVRTLDRKASGTTIESSNGSKVVRATKFNRDK KFRSTVASNVPKVKEIKVTSPATVMDQSSKPTRQSKLKSLVANDAPSPSVNSEKQTDR KMTVMNVAKNARVWQKKEEEKISPVKLSRSINLSSKSLLSIKMRAVKKEKPASLVKSN KKVYGAENAVADVKEKNLKSASPKVRKVEVSKKESRSQKENSATPRTENTRQPKSSTI PAQSPRKLTFRRGKVLNLQSNSESSSTPRRLRFRPAKTVEDSNRSKESTRGRRKSDSA ASSGSKDSGSSKPEVVILRHQDVRDKKKNEQGLLNNVIEETASKLVRRGRAR</aaseq>

Gene Sequence

<dnaseqindica>764..2231#2476..2864#gcatcgctactccaactcatcatcagcagcagcaaaagccagccagcgacctctccattctctccaaatctctctcgctttccatctccattttcctcgcaatcattccgttcagttatatctgctcgttgctcgttgattcgctcgctttctgtccctgcgatctgtcgccgccgtcgttttgccggcgagaacggcggctagggaggcggcggcggtgagtctttgggtttcttgcccgctgtgtgtgtgttgttcttgtgttcatcaagtactcaaagtttcgggggttatttttttctttttactgatgagatggtgttgatatgatagcactgtttgatcacgatttgattgaatcaattagtaattgattattagttatcactatgttttatgtatcctggaatcttggaatggatcgcttcgttttattgattactgagcgagatttattatgttttgaggactggatttatcatgccattcactcattaattatctgattaacttgcatgtcctgctgatgaattatgtggctcctattgtcatcaagtaggcaacccaaacctactgtagtgttgcatatgcagcaatacaatataaatagaagattaaagttctgtatttatcatgctatgtatgttctgcgatctccacattttacattgttgtgtgcttgtgtcggatgtaagtatgctagttcttcatgtgctcacatgtgtgtctgcattgtgaaaaattgcagcatctgtgctcctaaatgacagaggaagtggtcaaagaggttatcatagtctcaactcccgaatcatctaaatcgacaagcggcgatttcccggtgaattctcttgaaaatgtggatgtcagcagtgtgccatctgacctgaagaggaaggagaagtcagtgccacattacctgagagcatccactggttcttgccatgacagctgcaaatttggggcacatcattcccctgaacccaagaagtactggcctgttcgtcgcaggcgacatcaggaccgtgccaatgccgggtgcggaaagcaaggccaggatgaaatccagacacaaaaaggcagatccagaaacaaggacctggagctgaagatttgtcttgtgaaagatggtaatgttcatgacaagcctgaattcatcgaggtgaagaagccgcctattgaaatggcatctgacaactctgaaacctcaccatgcgtgcaagatcagttgtcatcagctgaagaatccaaacgtgttgaggatggagctgatctgccatgtggtgatgataaattcttgatccctgatggcaatgctgcatgttttgtggatggagaatcatcagagggagctgtaagcattgagctggagatgccgttggccatccaggacagtgacgcgtctgacgatcatatcgcagatgccatttcgcctcctgaatgtgtgtacaaagctggtgaacagttacttgtggatgacatgtgtgatgatggatcaggaaatgagtgtgcaggttcagagaagaagagcactcagattgtgatggcctccgagaagcgtgaaaaatctgggcatggaactaaatcgaagagtttgtataatgtttcagtaaaaccgaaggtgaaagagacatcgactgcaacgcgaagcaatgcgtcaagccagaaaattgtaagaacattggatcggaaagcttcaggtacaacaattgaaagctccaatggatcaaaggtagtgagagccaccaagttcaatagggacaagaaattcagatctaccgtcgcatcgaatgtaccaaaagtgaaggagatcaaagttacatcaccagctactgtgatggatcaatcttccaaacctactaggcaatcaaagctgaagtccttggttgcaaatgatgctccatctccatcagttaattcagagaaacaaactgacagaaagatgacagtgatgaatgttgccaagaatgctcgtgtttggcaaaagaaggaagaagagaaaataagtccagtgaaactgtctcgttctataaacttgtcatccaagtcccttttgagcataaagatgagagcagtcaagaaagaaaaacctgcttccctagtgaagagcaacaagaaggtgtatggagcagaaaatgctgttgctgacgttaaggagaaaaacctgaagtcagcttcaccaaaagtgagaaaagtagaagttagcaagaaagaaagccgttctcagaaaggtactacattttgtttgcccccctgtcaacaccatgttcaaagatttgcttaatttacattcaacattactacagatttcacatgataatctgtctgtttatgtcatgattgacaataaggtttaccttcttttctccccatcctaattcagtaatcttgcatccaacattactacagacaatttatgcagaaaacacttgtttctcaagcaaacattgacatgtgctcattcaaatttagcagaaaattctgccactccaagaactgaaaacacaaggcagccaaagtcctcaaccatcccagcgcagtcgcctcgcaagctaactttccgacgaggaaaggtactgaacctacagagcaattcagagtcgagcagcacgccgagacggctccggttcaggcctgcaaagactgtagaagacagcaacaggagcaaagaatccaccagagggagaaggaagagtgacagtgcagcctcttccgggtcaaaagattcaggctcttcgaaacctgaagttgtcatcctgaggcatcaggatgtcagggacaagaagaagaacgagcagggattgttgaacaatgtgatcgaggagacagcgagcaagcttgtgagacgaggaagagcaaggtgaaggccctcgtcggcgccttcgagacagtgatctcgcttcaagaaagtaaggtggctccagttacagctgcagctctgagctgaatgatgtgtgttttcgttttggagcttgtgaacttcctgtaaattttggag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0578300, RefSeq:Os12g0578300