BGIOSGA008093

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Revision as of 03:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008093| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008093, complete gene.| tag = OsI_070...")
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Gene Name

BGIOSGA008093

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008093, complete gene.

LocusTag

OsI_07001

Ensembl Transcript ID

BGIOSGA008093-TA

Ensembl Protein ID

BGIOSGA008093-PA

Length

3499

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:14037955..14041453

Sequence Coding Region

14037955..14038185,14038810..14038977,14039957..14040050,14040472..14040570,14040819..14040974
,14041203..14041453

Genome Context

<gbrowseImage1> name=IndicaChromosome02:14037955..14041453 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:14037955..14041453 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGGGTTGTCGCCGCTTCGGCTGATGCCACCAGGGACGAGATTAAGATTATGAATGTGTACATATGGGACATGGATGAAACCCTCATTCTGCTCAAGTCGCTGCTGGATGGCTCGTATGCTGGTGCCTTTGATGGCCTCAAGGACCATGATAAGAGTGTTGATATAGGGAAGAGGTGGGAGAATCTCATTCTGGAACTCTGTGACGAGCATTTCTTCTATGAGGAGATTGAGAATTACAATGAACCCTTTCTCAGTGCTGTCAAAGAATATGATGATGGGAAAGACTTGACAACATATGATTTTGAAGCTGACTGCTTTAGTTCGCCTTATGATGATCTGAATAAAAGGAAGCTTGCTTACAGGCACCGTGCTATTGGAGAGAAGTATACAAAGGGTTTGGAAAAAATTCTGGACCACCACATGATCAAAGTCTGGAATGATCTGTATAGCGCGACCGACAAATACACCGATGGTTGGCTTTCTTCAGCACTTATGTGGCATAATCAGATGCTTATGTGGTATAATCGGGTGCTTATGCGGCTTAAGCTGTACAAGGTTGGGGCATCCGTTCCTTGTATGCGGCCTTCTCATAAGTTGTTGGAAGAAGCAATGGGTAAATCAACAGCTGAGTCCACTGCCAAACATTCAAGCATCAATTGCATAGTTACATCAGGGTCCCTGATTCCAAGTCTTGCCAAATGTTTGCTCTATCGTCTGGATGATGTGGTTGCATTCGAGAATGTTTACAGCTCCTGGGAAGTCGGGAAACTGCAGTGCTTCAAATGGATCAAGGAGCGCTATGATGGCCCAAACGTCCGTTTCTGTGCAATCGGAGACGGACACGAAGAATGCACCGCTGCGCAGATAATGAAGTGGCCATTTGTCAAGATCGAGTTCCACCCTGATGCCCCTCATAGGTTCCCTGGCCTGAACCTTCCAACCATTCATCGCATCATGGATACCGTTTATGATTCATCGAGCAACGATGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MDGVVAASADATRDEIKIMNVYIWDMDETLILLKSLLDGSYAGAFDGLKDHDKSVDIGKRWENLILELCDEHFFYEEIENYNEPFLSAVKEYDDGKDLTTYDFEADCFSSPYDDLNKRKLAYRHRAIGEKYTKGLEKILDHHMIKVWNDLYSATDKYTDGWLSSALMWHNQMLMWYNRVLMRLKLYKVGASVPCMRPSHKLLEEAMGKSTAESTAKHSSINCIVTSGSLIPSLAKCLLYRLDDVVAFENVYSSWEVGKLQCFKWIKERYDGPNVRFCAIGDGHEECTAAQIMKWPFVKIEFHPDAPHRFPGLNLPTIHRIMDTVYDSSSNDG</aaseq>

Gene Sequence

<dnaseqindica>1..231#856..1023#2003..2096#2518..2616#2865..3020#3249..3499#ATGGATGGGGTTGTCGCCGCTTCGGCTGATGCCACCAGGGACGAGATTAAGATTATGAATGTGTACATATGGGACATGGATGAAACCCTCATTCTGCTCAAGTCGCTGCTGGATGGCTCGTATGCTGGTGCCTTTGATGGCCTCAAGGACCATGATAAGAGTGTTGATATAGGGAAGAGGTGGGAGAATCTCATTCTGGAACTCTGTGACGAGCATTTCTTCTATGAGGAGGTCAGCTCCACTCCACTACTATCTGCTGGCTACTTGCCATGTTACTATATATTTGTAGGCACATTCTTGGGTAGATGTGATTGATTTCCTTTTTAGTAATAGAAACAAGTTGAAATTCCCGCGCAAAGTTGCGCGGGTCTACTTGAAATAGAATCGTATCTGTTAAATGTTTGTAGCCATTAATCTAGGCCGTTATAATTTGGTCCCACCATGATGGACGGTGGAGATCTTTCTCTTTTCCGCCGGCCAACGTGGTGCTTTATATGCCTTTAGAGCAAACGTGGTAGCTCCTTTGCCTTTAGAGCAAACGTGGTAGCTCCTTTTAGTGAGCTCTCAATAATATAACGGATAGATAGATACGACAACTGTACCAGAAATAGATAGAACGTATGATAAAGTGTTTCTACAAATTGGACTGTCCATGCCAGTATCTTCTTTTTGTCACTGTACTTGTCGTGTAGTTATCTTTTTGGAATCCATTTGTACGTGAAATCTTGCTTCATATAATTCATCTAGCTGGGCTCTGCACTTAAGTGTCTGATGTTTCATTTAATGCATGGGTAAACCACTCTTTTTTATGTCATATTTGTTAACTGATCATTTTTGTTCTCACACAAAATGCAGATTGAGAATTACAATGAACCCTTTCTCAGTGCTGTCAAAGAATATGATGATGGGAAAGACTTGACAACATATGATTTTGAAGCTGACTGCTTTAGTTCGCCTTATGATGATCTGAATAAAAGGAAGCTTGCTTACAGGCACCGTGCTATTGGAGAGAAGTATACAAAGGTATCACAGGAATTACCTTCTCTTACATCCACCCCATATTGCTTTCTCTAGGCCTTTTTTCAGGGGCTAGGATGGTGAGGGTTCCTGGCCATCCACCTGATTAGAATAACTTTCATTCACTTCCATATTGGCCCATCCAAACAGGCCCTAAGGTTCATGCCCTCTGTCAGGCATATTTTGAATGTACCTTTTAAGAATGAACCTTCTAAATATGGATGTGGTGCAGTGCTCAGGTCACTTCTCTAGTGAAACTGTGATGCTTCATTCCATTTAGTAAGAATATTGTTACTGTTCAAAATTTGATACCATGGAGTGTCTGTGTCTGGTATGGATCAGCACACTTTTCTGGTGTTTGATCAATCATTGTTAGTTGCTATAATGCTTGGACTTTATATTAAGAAATAGAATAGATTCTTTATGACGTCTAGGAATAAATCGTAGCAGGGTGCTAACTGAAGTATGTTGCTTTTATCTTCTTCTTTTTTTTGCGGGATGTTCCATTGTGAGCTTTACGCTGAGCACTGGTCTGTACTTGTAATAGAGTTGCCACACACAGCAAGAAAGAGGTTTGTTCTTGGGAAGTATGTAGGTTAATTTGTATCAAGGCGACAGGGGTGGGGAGTTATGTGGGGATTATAGTGGATATTCAGTTCTTTGAAATGACTTGTCCTCCTCAGTGATTCTCTGGGACTTCATGTTTTGGTTCAGGCTATTTTGTTCAGAGGTTTTGATCTTAGCGAAACTTTATTTAGGAACAATAATAAGAAATAGGGCCTTAGAAGTCATAAGTGCCGTGCTGGGACTTTATATAGAGCATCATCATTAGATATTCACTTTTCAGCTATCTATTTTGTAGAGCTCTTCTGTTTTCATTTCGTTGTTATTATTTAGAACTTTTTCATGCCAGTACTAATTTCTAATATTTTGTCAATTTCATGTTTGTAATGAGTAATTGAACTTCTTTGGTGTTTCTTCTCAGGGTTTGGAAAAAATTCTGGACCACCACATGATCAAAGTCTGGAATGATCTGTATAGCGCGACCGACAAATACACCGATGGTTGGCTTTCTTCAGGTATTCTAACTCGTACTTATTTTCCTTTAATATTTAGAAAAAAAGGACTAGTTTTCTGATTTTTGTTGGCAGAAAAAAATACTTTGGCCTTCAGTTCTGTTGATGAACTAAGTATGACAACAAAGTTGTAAGGGTTTTACAACCACAAAGAATCTTCTAGAGCCTTATGTTGCATAATTGATGGTACTCCAAATTGTCAATGCCGAAAGAACATGCTTCTGATATTTCTACTTTCAACCAGTGGGATTAAATTTGGGCTGGCATTTTTGTTTATGGACTATATAATTGTTATCACCAAAGCTATAAGAGTTTACAACTAAGAGGACCTGCAACAACTTAACAATGCATGTACCAAAATAATGTCCCTTCTGCTTGATACAATGTTTCAAAAAGCGATATGTGGTTTTGTGTGGTTTTGTAGCACTTATGTGGCATAATCAGATGCTTATGTGGTATAATCGGGTGCTTATGCGGCTTAAGCTGTACAAGGTTGGGGCATCCGTTCCTTGTATGCGGCCTTGTACGTGGCCTTGTAGACCTTTTTTTCAAAACACTGGCTTGATGTATGCTTTTAATCACTGTAGGTTGCCACCTCAGAATACATGTCCACTGAAAGAAAAGTCAGGAGTTTTTAAGTTTTTCTCTGTGTACTATGCGTTAGAACTTTTGAGAACAAGATTATATTGTCTTAACTGTTCTTTCTTTAGCCAAATTCAACAATCAGTTTTGTTGCTTCAGTGCTCAATTGCCTTTTCTCTTGTTATGCAGCTCATAAGTTGTTGGAAGAAGCAATGGGTAAATCAACAGCTGAGTCCACTGCCAAACATTCAAGCATCAATTGCATAGTTACATCAGGGTCCCTGATTCCAAGTCTTGCCAAATGTTTGCTCTATCGTCTGGATGATGTGGTTGCATTCGAGAATGGTATGTCTAAAAGTTCCTTTGAGCATTTTGTTTCTGTTGTGTGTTTATGGAAAATATGCAATGGGATAATTGGCCGTGCTGATAGTTCTTGAATGATTGATGGCCTTTGTATACCATGTCCAGAAAATCCCGTAGCAGTTGGCTACTGTTGTCATACTAGGAAGTAGATGAATTCTACGCATAAACAAATGTAGATTAATTTACTTAAAATCTGCTTCTGCTTTGCAGTTTACAGCTCCTGGGAAGTCGGGAAACTGCAGTGCTTCAAATGGATCAAGGAGCGCTATGATGGCCCAAACGTCCGTTTCTGTGCAATCGGAGACGGACACGAAGAATGCACCGCTGCGCAGATAATGAAGTGGCCATTTGTCAAGATCGAGTTCCACCCTGATGCCCCTCATAGGTTCCCTGGCCTGAACCTTCCAACCATTCATCGCATCATGGATACCGTTTATGATTCATCGAGCAACGATGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008093