BGIOSGA008100

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Revision as of 03:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008100| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008100, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008100

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008100, complete gene.

LocusTag

OSJNBB0042G06.4

Ensembl Transcript ID

BGIOSGA008100-TA

Ensembl Protein ID

BGIOSGA008100-PA

Length

4517

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:14109464..14113980

Sequence Coding Region

14109464..14110105,14110432..14113980

Genome Context

<gbrowseImage1> name=IndicaChromosome02:14109464..14113980 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:14109464..14113980 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTGCGTGCTGGCGTCGGAGGTCGCCACGGTGCTCGCCATCATGCGCCGCAACGTCCGCTGGGCCGGCGTCCGCTACGGCGGCGACGACGGCGCGGACGACGAGCACCTCGACCACCCGCTCATCGCGGGGCTCAAGTCCCTGCGCCGCCGCGCCGCCTCGTGGGACACGCGCCAGTGGCGGGACGTCGAGCCGCTCCTCTACCTCCGCCCCTTCCTCGACGTCGTCCGCTCCGACGAGACCGGCGCGCCTATCACGGGCGCCGCGCTCTCGTCCTTGCACAAGATACTCACGCTCGACCTCGTCGGCCTTGACGCGCCCAACGACGCCGAGGCCATGGGCGCCGTCGTGGAGGCCGTCACGGGGTGCCGCTTCGAGGTCACTGACCCGGCGTCCGAGGAGACGGTGCTGGCTCGGGTCCTCCAAGTGCTTCTCGCGTGCGTGCGTGGCCGCGCTGCGCCAGCTCTGGCCAACCGCCATGTCTGCAACATCGTCAGCACTTGCTTCCGCGTCGTGCAGCAAGCCGGCACTAAGGGGGAGCTGCTGCAGCGCGTCTCCCGCCAGACCATGCAGGAGGTTATCCGCTGTGTCTTCGCTCGCCTGCCTGATGTTGATGCCACCGTGGTTGCCGACGGGCAGACTGCTTGTAGCAAGAACCAAGGTTTGAGTGATGGAGAGATAGGGAACGGGAAGAGTGATTTTGTGTGCTTGAATAGCTCTGGAGATGAGGTGGGAGGTGGATTTGGTGTTGTTCAAGACCAGGCTATGAGTGAGCTGTTTGGGGTTCCTTGCATGGTAGAGATATTGCAATTCTTGTGCTCCCTTTTGAACATAGCAGAAGACATTGAGGTGAATCCAAGGATTAATCCAATTGACTTTGATGAGGATGTGCCACTATTTGCCCTCGGGTTGATTAGTTCTGCTATTGAGTTGTCAGCTTCATCCATAAACAAACACCCCAAATTGCTGGCATTTGTACAAGATGAACTGTTCCGCAATCTAATGCAATTTGGCTTGTCAATGAGCCCTTTGATTCTGTCAACCGTGTGCAGCATTGTTTTTACTCTCTTCTACCATTTGCGTCAGGAACTTAAGCTACAACTTGAGGCTTTCTTCTCATGTGTTATCATAAGACTTGGGCAGAGTAGATATGGTGCTAGTTATCAGCAACAGGAAGTTGCTCTGGAGGCTCTAGTGGATTTCTGTCGGCAGAAAGAGTTTATGGCGGAGATGTATGCGAATATGGATTGTGATTTACAGTCCAGTAATATTTTTGAAGACCTTGCTAACCTTCTGTCTAAAAGTGCATTTCCTGTGAAAAGTCCTTTGTCCACCCTGAATGTGCTTGCTCTAGATGGTTTGGTTTTGGTCATTCAGGCAATAGCAGAGAGGACTGATAATGCACCTCAGCATCATGAACAAACAGTGCCTGAAATAAGTGAATATTTTCCTTTTTGGCAGTTGAAATGTGAGAACACTAATGATCCTGATCAATGGGTTAGATTTGTTCACCAGCAAAAGAGCATCAAGAGAAAGCTAATGGTTGGTGTTGAACATTTCAACAGGGACAAAAAGAAGGGCTTTGAGTACCTGCAAGGGGCTCATCTCCTGCCTGAAAGACTTGATCCACGCAGTGTGGCGTTGTTTTTCCGGTACACACCTGGGTTAGATAAGAATCTTCTTGGGGACTACCTGGGAAATCATGATGAGTTTTCCATTCTGGTCCTTCATGAGTTTGCTAAAACCTTTGACTTCAAGGAGATGAATTTGGATGCTGCCTTAAGGCTCTTCTTGGAAACTTTTCGGCTGCCTGGTGAGTCACAGAAGATACAAAGGATTCTTGAGGCCTTTTCTGAGAGATATTATGAACAATCACCACAAATGTTTGTTAACCGGGATGCTGCTCTGGTGTTGTCATATTCAGTAATCATGCTCAACACAGATCAGCACAATATAAGGGTTAAGAAGAAGATGACGGAAGAAGACTTTATTAAGAACAATCGCCGTATCAATGGTGGGAACGATCTTCCAAGGGAATTCTTGTCGGAATTGTATTATTCTATTTGTCGGAATGAAATCAGAACCATTCCGGAGCAAGGAGCTGGATGCTCTGAGATGTCTTTCAGCCGGTGGGTTGATCTGATGTGGAAGTCAAAGAGGACATCAGCATACATTGCTTGTGACTCCTTCCCTTTTCTTGATCATGACATGTTTACTATCATGGCTGGACCAACGGTTGCTGCTATCTCAGTGGTTTTTGATAATGTTGAGCATGAAGAGTTCCTTACAGGATGCATTAATGGTTTTCTATCAGTGGCGAAGTTGGCGGCATTCTATCATCTTGATGATGTGTTGAATGATCTTGTTGTGGCACTATGTAAGTTCACCACCTTGCTGAACACTTCCTATATTAATGATCCTGTAACAACTTTCGGTGAGGACACCAAGGCTAGAATGGCAACCGAGGCTGTTTTTACTATAGCAACTACTCATGGTGATCACATACGCAGTGGGTGGAGGAACATAGTAGATTGCATTTTAAGATTGCATAAAATAAGCCTACTTCCTGGTTGCCTCACCGGTGACACAGCTGATGATCAGGAGTCCTCATCAGATATGTTGCCTAGCAAGCTTGCCTCATCTCGAGCTGCACCTCAAGTTGTGCCAATCAGCACTCCTAAAAAATCATATGGGCTCATGGGGAGGTTTAGTCAGCTATTGTATTTAGATGCTGAAGAATCTAGGTTCCAGCCAACTGAGGAGCAACTTGCTGCTCAGAGGAATGCTTCAGAGACCATAAAGAAGTGCCAAATAGGTACCATCTTCACTGAGAGCAAATTCTTACAAGCTGACTCTCTCTTAAATCTGGCAAGAGCCCTCACCCAGGCGGCAGGTCGACCACAAAGGATCACCAGCTCACTTGATGATGAAAGCACATCAGTCTTTTGCTTAGAGCTTCTAATTACTGTCACTTTAAACAACAGAGACAGGATTGTCCTTTTGTGGCAGGGTGTTTTTGAGCACATAACTCATATTGTTCAGTCTACAGTGATGCCCTGTAATCTGGTGGAGAAGGCTGTTTTTGGGCTGCTGCACATCTGTCAGCGCTTGCTTCCTTATAAGGAGAATCTTGTGGATGATTTACTGAGGTCTCTTCAGTTAATTTTGAAGCTCGATGCTCGTGTGGCTGATGCTTATTGTGAGAACATTACCCAGGAGGTTACGCGCCTGGTTAAGGGCAATGCAACTCATATAAAGTCCCAGATGGGTTGGCGAACTATCATTTCATTACTCTGCATCACTGCTCGTCATCCAGATGCTTCTGATGTTGGTTTTGAAGCCCTAGTTTTTATCATGTCTGAGGGAGCACACCTCTCCCCTGCTAACTTTGTCCTTTCTGTGGAGGCCTCAAGGCAGTTTGCAGAGTCTCGGCTTGGCTCTGCAGAAAGATCTATCCATGCTTTGAACCTTATGGCAGAATCAGTGAATTGTCTTACACGCTGGTCACGTGAGGTTAAGGAAGCTGGTGGGGAGGCTGACAGGATATTGGAAGGAATTGCTGAGATGTGGCTGCGACTAGTGCAGGCACTACGGAAGGTGTGCACAGACCAGAGGGAGGAAGTAAGGAATCATGCGCTATTATCATTGCACAGATGCTTAGTAGTTGATGGGATATCAGTGCCATCTTCAGCATGGTTGATGTCATTTGATATTATTTTCCAGTTGCTTGATGAATTACTGGAGATTGCACAAAATTACTCACCGAAGGATTTCAGAAACATGGAGGTGTCCCTCTTGCATGCTGTAAAACTTCTATGCAAAGTGTTCTTGCAGTCACTTAATGACATTTCATCACAGAGCAGCTTCAGTAAGCTGTGGTTGGAAGTACTTGACATGATAGAGAAGCTTATGAAAGTCAAAGTGAGAGGGAGGAGGACTGAGAAGCTACAAGAGGTTATCCCAGAGCTACTGAAGAACATACTGCTGGTGCTAAAAGCAAATCGGGTTTTATCAAAGACAAGCACCAGTGAAGAGAACAGTTTGTGGGAAGCAACATGGCTTCAAGTTAACAAGATTGCACCTTCACTGCAGCCAGAAGTTTTTCCTGACAGTGAGGGTGATGTAGCAACACAAAGTGCAAAAAACAAGTCAGATAGTCCAGCACAATCTGAAGGCGTGAATGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MACVLASEVATVLAIMRRNVRWAGVRYGGDDGADDEHLDHPLIAGLKSLRRRAASWDTRQWRDVEPLLYLRPFLDVVRSDETGAPITGAALSSLHKILTLDLVGLDAPNDAEAMGAVVEAVTGCRFEVTDPASEETVLARVLQVLLACVRGRAAPALANRHVCNIVSTCFRVVQQAGTKGELLQRVSRQTMQEVIRCVFARLPDVDATVVADGQTACSKNQGLSDGEIGNGKSDFVCLNSSGDEVGGGFGVVQDQAMSELFGVPCMVEILQFLCSLLNIAEDIEVNPRINPIDFDEDVPLFALGLISSAIELSASSINKHPKLLAFVQDELFRNLMQFGLSMSPLILSTVCSIVFTLFYHLRQELKLQLEAFFSCVIIRLGQSRYGASYQQQEVALEALVDFCRQKEFMAEMYANMDCDLQSSNIFEDLANLLSKSAFPVKSPLSTLNVLALDGLVLVIQAIAERTDNAPQHHEQTVPEISEYFPFWQLKCENTNDPDQWVRFVHQQKSIKRKLMVGVEHFNRDKKKGFEYLQGAHLLPERLDPRSVALFFRYTPGLDKNLLGDYLGNHDEFSILVLHEFAKTFDFKEMNLDAALRLFLETFRLPGESQKIQRILEAFSERYYEQSPQMFVNRDAALVLSYSVIMLNTDQHNIRVKKKMTEEDFIKNNRRINGGNDLPREFLSELYYSICRNEIRTIPEQGAGCSEMSFSRWVDLMWKSKRTSAYIACDSFPFLDHDMFTIMAGPTVAAISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDPVTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQESSSDMLPSKLASSRAAPQVVPISTPKKSYGLMGRFSQLLYLDAEESRFQPTEEQLAAQRNASETIKKCQIGTIFTESKFLQADSLLNLARALTQAAGRPQRITSSLDDESTSVFCLELLITVTLNNRDRIVLLWQGVFEHITHIVQSTVMPCNLVEKAVFGLLHICQRLLPYKENLVDDLLRSLQLILKLDARVADAYCENITQEVTRLVKGNATHIKSQMGWRTIISLLCITARHPDASDVGFEALVFIMSEGAHLSPANFVLSVEASRQFAESRLGSAERSIHALNLMAESVNCLTRWSREVKEAGGEADRILEGIAEMWLRLVQALRKVCTDQREEVRNHALLSLHRCLVVDGISVPSSAWLMSFDIIFQLLDELLEIAQNYSPKDFRNMEVSLLHAVKLLCKVFLQSLNDISSQSSFSKLWLEVLDMIEKLMKVKVRGRRTEKLQEVIPELLKNILLVLKANRVLSKTSTSEENSLWEATWLQVNKIAPSLQPEVFPDSEGDVATQSAKNKSDSPAQSEGVNV</aaseq>

Gene Sequence

<dnaseqindica>1..642#969..4517#ATGGCGTGCGTGCTGGCGTCGGAGGTCGCCACGGTGCTCGCCATCATGCGCCGCAACGTCCGCTGGGCCGGCGTCCGCTACGGCGGCGACGACGGCGCGGACGACGAGCACCTCGACCACCCGCTCATCGCGGGGCTCAAGTCCCTGCGCCGCCGCGCCGCCTCGTGGGACACGCGCCAGTGGCGGGACGTCGAGCCGCTCCTCTACCTCCGCCCCTTCCTCGACGTCGTCCGCTCCGACGAGACCGGCGCGCCTATCACGGGCGCCGCGCTCTCGTCCTTGCACAAGATACTCACGCTCGACCTCGTCGGCCTTGACGCGCCCAACGACGCCGAGGCCATGGGCGCCGTCGTGGAGGCCGTCACGGGGTGCCGCTTCGAGGTCACTGACCCGGCGTCCGAGGAGACGGTGCTGGCTCGGGTCCTCCAAGTGCTTCTCGCGTGCGTGCGTGGCCGCGCTGCGCCAGCTCTGGCCAACCGCCATGTCTGCAACATCGTCAGCACTTGCTTCCGCGTCGTGCAGCAAGCCGGCACTAAGGGGGAGCTGCTGCAGCGCGTCTCCCGCCAGACCATGCAGGAGGTTATCCGCTGTGTCTTCGCTCGCCTGCCTGATGTTGATGCCACCGTGGTTGCCGACGGGCAGGTGTGATTCCTTCCTGTAAAGATTTCGAACCTTAGTTACTTGTGCGTTGGAAACATGATGAGAAATGCTGCGATTGTCTTCCACTAAACATGATAAATTTAACTTGCAATGCTCATCTAGGTGAGTTTAAAGAAATGTATATTATGTGAATTTTTTTTGTTAAAGATGTTCATGGTATATTGTCTCGCTAGTTCAAATAGCTGCCATTCTAAATTTAACTTGCATCACATTAGTTCTGGAAAGAGCATGTTGCAGTAAGAAGGCTCATTCATATATCCCTGTACTAAGTTAAATGCATTAATACTGGTGATAGCATTTTTCTGCAGACTGCTTGTAGCAAGAACCAAGGTTTGAGTGATGGAGAGATAGGGAACGGGAAGAGTGATTTTGTGTGCTTGAATAGCTCTGGAGATGAGGTGGGAGGTGGATTTGGTGTTGTTCAAGACCAGGCTATGAGTGAGCTGTTTGGGGTTCCTTGCATGGTAGAGATATTGCAATTCTTGTGCTCCCTTTTGAACATAGCAGAAGACATTGAGGTGAATCCAAGGATTAATCCAATTGACTTTGATGAGGATGTGCCACTATTTGCCCTCGGGTTGATTAGTTCTGCTATTGAGTTGTCAGCTTCATCCATAAACAAACACCCCAAATTGCTGGCATTTGTACAAGATGAACTGTTCCGCAATCTAATGCAATTTGGCTTGTCAATGAGCCCTTTGATTCTGTCAACCGTGTGCAGCATTGTTTTTACTCTCTTCTACCATTTGCGTCAGGAACTTAAGCTACAACTTGAGGCTTTCTTCTCATGTGTTATCATAAGACTTGGGCAGAGTAGATATGGTGCTAGTTATCAGCAACAGGAAGTTGCTCTGGAGGCTCTAGTGGATTTCTGTCGGCAGAAAGAGTTTATGGCGGAGATGTATGCGAATATGGATTGTGATTTACAGTCCAGTAATATTTTTGAAGACCTTGCTAACCTTCTGTCTAAAAGTGCATTTCCTGTGAAAAGTCCTTTGTCCACCCTGAATGTGCTTGCTCTAGATGGTTTGGTTTTGGTCATTCAGGCAATAGCAGAGAGGACTGATAATGCACCTCAGCATCATGAACAAACAGTGCCTGAAATAAGTGAATATTTTCCTTTTTGGCAGTTGAAATGTGAGAACACTAATGATCCTGATCAATGGGTTAGATTTGTTCACCAGCAAAAGAGCATCAAGAGAAAGCTAATGGTTGGTGTTGAACATTTCAACAGGGACAAAAAGAAGGGCTTTGAGTACCTGCAAGGGGCTCATCTCCTGCCTGAAAGACTTGATCCACGCAGTGTGGCGTTGTTTTTCCGGTACACACCTGGGTTAGATAAGAATCTTCTTGGGGACTACCTGGGAAATCATGATGAGTTTTCCATTCTGGTCCTTCATGAGTTTGCTAAAACCTTTGACTTCAAGGAGATGAATTTGGATGCTGCCTTAAGGCTCTTCTTGGAAACTTTTCGGCTGCCTGGTGAGTCACAGAAGATACAAAGGATTCTTGAGGCCTTTTCTGAGAGATATTATGAACAATCACCACAAATGTTTGTTAACCGGGATGCTGCTCTGGTGTTGTCATATTCAGTAATCATGCTCAACACAGATCAGCACAATATAAGGGTTAAGAAGAAGATGACGGAAGAAGACTTTATTAAGAACAATCGCCGTATCAATGGTGGGAACGATCTTCCAAGGGAATTCTTGTCGGAATTGTATTATTCTATTTGTCGGAATGAAATCAGAACCATTCCGGAGCAAGGAGCTGGATGCTCTGAGATGTCTTTCAGCCGGTGGGTTGATCTGATGTGGAAGTCAAAGAGGACATCAGCATACATTGCTTGTGACTCCTTCCCTTTTCTTGATCATGACATGTTTACTATCATGGCTGGACCAACGGTTGCTGCTATCTCAGTGGTTTTTGATAATGTTGAGCATGAAGAGTTCCTTACAGGATGCATTAATGGTTTTCTATCAGTGGCGAAGTTGGCGGCATTCTATCATCTTGATGATGTGTTGAATGATCTTGTTGTGGCACTATGTAAGTTCACCACCTTGCTGAACACTTCCTATATTAATGATCCTGTAACAACTTTCGGTGAGGACACCAAGGCTAGAATGGCAACCGAGGCTGTTTTTACTATAGCAACTACTCATGGTGATCACATACGCAGTGGGTGGAGGAACATAGTAGATTGCATTTTAAGATTGCATAAAATAAGCCTACTTCCTGGTTGCCTCACCGGTGACACAGCTGATGATCAGGAGTCCTCATCAGATATGTTGCCTAGCAAGCTTGCCTCATCTCGAGCTGCACCTCAAGTTGTGCCAATCAGCACTCCTAAAAAATCATATGGGCTCATGGGGAGGTTTAGTCAGCTATTGTATTTAGATGCTGAAGAATCTAGGTTCCAGCCAACTGAGGAGCAACTTGCTGCTCAGAGGAATGCTTCAGAGACCATAAAGAAGTGCCAAATAGGTACCATCTTCACTGAGAGCAAATTCTTACAAGCTGACTCTCTCTTAAATCTGGCAAGAGCCCTCACCCAGGCGGCAGGTCGACCACAAAGGATCACCAGCTCACTTGATGATGAAAGCACATCAGTCTTTTGCTTAGAGCTTCTAATTACTGTCACTTTAAACAACAGAGACAGGATTGTCCTTTTGTGGCAGGGTGTTTTTGAGCACATAACTCATATTGTTCAGTCTACAGTGATGCCCTGTAATCTGGTGGAGAAGGCTGTTTTTGGGCTGCTGCACATCTGTCAGCGCTTGCTTCCTTATAAGGAGAATCTTGTGGATGATTTACTGAGGTCTCTTCAGTTAATTTTGAAGCTCGATGCTCGTGTGGCTGATGCTTATTGTGAGAACATTACCCAGGAGGTTACGCGCCTGGTTAAGGGCAATGCAACTCATATAAAGTCCCAGATGGGTTGGCGAACTATCATTTCATTACTCTGCATCACTGCTCGTCATCCAGATGCTTCTGATGTTGGTTTTGAAGCCCTAGTTTTTATCATGTCTGAGGGAGCACACCTCTCCCCTGCTAACTTTGTCCTTTCTGTGGAGGCCTCAAGGCAGTTTGCAGAGTCTCGGCTTGGCTCTGCAGAAAGATCTATCCATGCTTTGAACCTTATGGCAGAATCAGTGAATTGTCTTACACGCTGGTCACGTGAGGTTAAGGAAGCTGGTGGGGAGGCTGACAGGATATTGGAAGGAATTGCTGAGATGTGGCTGCGACTAGTGCAGGCACTACGGAAGGTGTGCACAGACCAGAGGGAGGAAGTAAGGAATCATGCGCTATTATCATTGCACAGATGCTTAGTAGTTGATGGGATATCAGTGCCATCTTCAGCATGGTTGATGTCATTTGATATTATTTTCCAGTTGCTTGATGAATTACTGGAGATTGCACAAAATTACTCACCGAAGGATTTCAGAAACATGGAGGTGTCCCTCTTGCATGCTGTAAAACTTCTATGCAAAGTGTTCTTGCAGTCACTTAATGACATTTCATCACAGAGCAGCTTCAGTAAGCTGTGGTTGGAAGTACTTGACATGATAGAGAAGCTTATGAAAGTCAAAGTGAGAGGGAGGAGGACTGAGAAGCTACAAGAGGTTATCCCAGAGCTACTGAAGAACATACTGCTGGTGCTAAAAGCAAATCGGGTTTTATCAAAGACAAGCACCAGTGAAGAGAACAGTTTGTGGGAAGCAACATGGCTTCAAGTTAACAAGATTGCACCTTCACTGCAGCCAGAAGTTTTTCCTGACAGTGAGGGTGATGTAGCAACACAAAGTGCAAAAAACAAGTCAGATAGTCCAGCACAATCTGAAGGCGTGAATGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008100