BGIOSGA008101

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Revision as of 03:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008101| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008101, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008101

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008101, complete gene.

LocusTag

OSJNBB0042G06.7

Ensembl Transcript ID

BGIOSGA008101-TA

Ensembl Protein ID

BGIOSGA008101-PA

Length

6644

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:14121020..14127663

Sequence Coding Region

14121020..14121141,14121851..14122368,14122473..14122587,14124209..14124374,14125568..14125738
,14126197..14126351,14127459..14127663

Genome Context

<gbrowseImage1> name=IndicaChromosome02:14121020..14127663 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:14121020..14127663 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCACACCACTTGCTTCCTCCAGCTTTCTCTGCCTTCTGCTGCTGCTAGCTAGGCGTGCGTACGACTGTTGCACAAAGCAGCTAGCGCCCTCTGCTGTAAAGCTGCAGGCTGGTACGTATCTAATGGCTGGGGTCATAAAATGGAAAATGATGTCATGTGAACAAAGTGGGAGGAGAAGTGCCGAAATTGCACGAGAATGCTTATCACTGACACCTAATAGATACAAGTGTCACAGCTACCAACATATTGGCTATTTGGGTGACTCTGCAGAGGGTTTCATTTGCCGTCCATTGAAGTCAAAACTAAGAAGCAAGGTTGGACTACATGTGGCTGCGAAGGTACACAATAAGGACGATGAAGGAAGCTGCAGCTCCAGAATTTCTGATGAGGACAACGGGACATTGTCTAATGCCTCGCGAAAAATGGAAGTAAACCATCTGGGGGCACTGAGATGCTATTTTTCTAAACTAAACACTGAGGACGCCCAGAAGCCATATTCTTTTCATCAGACGAACAAGCAGAGAACTGGCCCATTATCCACAAACATAGAAGAAGCAAACATGGCTACTGATTATGGAGATTTCAGGAATACGCTGGAATCATTCGAGATCAACTTCAACAGACGAAAAAAAGGTACAAAGGGTTATCTAAATACTGCCGTGGAGGACTACACAAATTATTTGATATTTGATGAGAAGAACTTCCTGGACATGCAGCAAGATGATCAAACATCCAGTTTCTGTTTGACAAATTTACTAGCTGCGATCAATATTGCAGTTATGTTGTTCGAAATAGCAAGTCCGGTGAGAAATTCTGATATTGAAAATCTCTCTCTCCCTTTGATGTATGGAGCCAAGATAAATGACCTAATACTATCGGGGGAATGGTGGAGACTACTAACACCAATGTGTTTGCACTCTGGGTTCTTGCACATAGCACTTGGATGTTGGGTATTACTTATCTTTGGACCTCGCGTGTCTAGAGCATATGGTCAAACGACATTTTTGCTGATGTACATACTTGGGGGAGTTTGCGGGAACTTGACAAGCTATCTTCACACGTCTGAGCTAACCGTCTGTGGCACAGGACCAGTATTTGCTTTAATTGGAGCATGGCTTGTCTATCAAAGCCAAAACAAGGATGCTATTGATAAGAACGTTTCAGAAACTATGTTCAGCCAGGCTGTTGTGGCAACAACTTTGAGCTTCTTATTGAGCAGTTTCGGGAGAATCGACAACTGGACACATCTTGGGGCAACAATTTGTGGACTACTTTTCGGCTATTTAACCTGCCCAAGTGTGCAGGTCGACAATGCTGCTAAGAAAGGTCAAAAGGCTGTGGTTCTTGTTAGGCGACAGGCCAGTCCATGGAAATCCATTGCCATCTTCGTCATAAGCATAATTGTGCTTGCTCTTTTCGCCTTTGCTTATGGAACACAAGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MATTPLASSSFLCLLLLLARRAYDCCTKQLAPSAVKLQAGTYLMAGVIKWKMMSCEQSGRRSAEIARECLSLTPNRYKCHSYQHIGYLGDSAEGFICRPLKSKLRSKVGLHVAAKVHNKDDEGSCSSRISDEDNGTLSNASRKMEVNHLGALRCYFSKLNTEDAQKPYSFHQTNKQRTGPLSTNIEEANMATDYGDFRNTLESFEINFNRRKKGTKGYLNTAVEDYTNYLIFDEKNFLDMQQDDQTSSFCLTNLLAAINIAVMLFEIASPVRNSDIENLSLPLMYGAKINDLILSGEWWRLLTPMCLHSGFLHIALGCWVLLIFGPRVSRAYGQTTFLLMYILGGVCGNLTSYLHTSELTVCGTGPVFALIGAWLVYQSQNKDAIDKNVSETMFSQAVVATTLSFLLSSFGRIDNWTHLGATICGLLFGYLTCPSVQVDNAAKKGQKAVVLVRRQASPWKSIAIFVISIIVLALFAFAYGTQA</aaseq>

Gene Sequence

<dnaseqindica>1..122#832..1349#1454..1568#3190..3355#4549..4719#5178..5332#6440..6644#ATGGCCACCACACCACTTGCTTCCTCCAGCTTTCTCTGCCTTCTGCTGCTGCTAGCTAGGCGTGCGTACGACTGTTGCACAAAGCAGCTAGCGCCCTCTGCTGTAAAGCTGCAGGCTGGTACGTAAGTGTTCCATGCAGGCTGGTACGTAAGTGTTCCGTGCATGAATTCGACCTTTGATTTTTCAGAGAACGACGATTGCGCATCGATCTGGCTTGTGTGCTTAATTGCTGCTTCCTGGTTTCTTCTCTCTCTCATCAATTAGTTGCGGCATGCGCATGTGATTTGTTTCTGCTTTGTTCTGACTTCTGAGGAGCATACGCTGGGTAGTTTATCGATCCTACTTCTGTATTTTATCGCATTAAACTCGATCGAATATTCAACTGCACCAGTGCATTGATGTATCCAATTATCAATTTTTGACCATTGACTCTACAAAGTTCTTTTTAACTATCAACCCCACAACTGAACGTGGTTTCAATAAATAAATTCATAGGTTGCAACAAGTTTCTGTTATGTTACTACTCATCCTTGCTCTAGATATTTGTGTGGTTGTAAATATATAGGCATCTCTATTATTTGAAAGCTTTTCATAGAAAAGTATTGCATCTTCCCTGACTTCCCATATGAACATACCCTGGTGGTAATTGGTACATACAAGTTTTAGATTTGAGATACTTGGTTATTTATTGTGTTCTTTAATTTGGACTTACAGCACATATATTCAATTGGGACCCGTTGCAACACACGGATACGATGCTAGTTAGCTCAAACAAATGAGTTGGTGTTGTGCTCTTGGTATACTAACACTCCAAACACTTGAACATTTCAGGTATCTAATGGCTGGGGTCATAAAATGGAAAATGATGTCATGTGAACAAAGTGGGAGGAGAAGTGCCGAAATTGCACGAGAATGCTTATCACTGACACCTAATAGATACAAGTGTCACAGCTACCAACATATTGGCTATTTGGGTGACTCTGCAGAGGGTTTCATTTGCCGTCCATTGAAGTCAAAACTAAGAAGCAAGGTTGGACTACATGTGGCTGCGAAGGTACACAATAAGGACGATGAAGGAAGCTGCAGCTCCAGAATTTCTGATGAGGACAACGGGACATTGTCTAATGCCTCGCGAAAAATGGAAGTAAACCATCTGGGGGCACTGAGATGCTATTTTTCTAAACTAAACACTGAGGACGCCCAGAAGCCATATTCTTTTCATCAGACGAACAAGCAGAGAACTGGCCCATTATCCACAAACATAGAAGAAGCAAACATGGCTACTGATTATGGAGATTTCAGGAATACGCTGGAATCATTCGAGATCAACTTCAACAGACGAAAAAAAGGTAACTTCAGTTTACTAAGAACAGAAGCATAGCGATCACAAACTTCACGGAAATTTTTCTTCGGGAACATAAGAAACTTCATGAAAACAGTAACGCTGATTTAGGTACAAAGGGTTATCTAAATACTGCCGTGGAGGACTACACAAATTATTTGATATTTGATGAGAAGAACTTCCTGGACATGCAGCAAGATGATCAAACATCCAGTTTCTGTTTGACGTAAGTACCGAAACGATCTTGTTTTTTTAGAGAAGGGTATTTTTACCCGGCCTCTACATCCAACCGGATATATACGTCCATTGAAATAGGGAACTTAGCCCCGCAAACAACCCAATTCGAGATCAACCGAATCGATCTTTTGTGGTTTAATTTTAATATTTTGTTCTCAACACAAATTGCACTATATACACAATATTTTGCGTCCTCCCACCGTTCCAAAATAAGTTGATTTCTATCATTGTACATACATTTGGTTCACAAATCAAGAAGTTTTATCCTTTCAATACCCTTTTACTACCCAAGTTACTAATACCACTCACATATTTTTTTCCCAATACTACTACGCAAGAGAGTTGTGTATCATTTCGTTAATAGAAGGAGAAGGTGTTAAAAAACATGACAAAACAACAAGTAAAAAACTCACTTGCACCACCAAAAGAAAAACCCCACAAGCTACCACCAGAACGATTACACGACCAAAAAAACAAAAGACAAGAAACCTAGCCGTGATCCAAAATAAGGAGAGCCAAATTCCATAGACGGGCTTCCTCTCTTGCTAGTACCAAAGAGGTTGATAGTCTAGGAGACACTCTTGAAGACACTATAGTCCAGTTCCAAGAATCACCAAGCTATTCAAGCCCTTCCTTCCTGATATTGCTGTCAACCAAACCATTGATTCCGGTCCAATATTTATCAAAATTCACATATGAGGGTTACGACGTAAGAACCCCAAGCACCACTTGCTCAAAGAGGGAAACCAAACCTGTCTAGCAAATAAATACACAAGAAACAAGAAAATTGGTCTTATCCTCTTGCTCACAAAGAGGGCATTTACTAGGATGCGAGAGGCGTCGATGTGCTTGGTGGTCCGCTGTCCAACACCAATTGTGTGCCACTAACTACATGAATAAATGACATTTTCCAGGGAATCAAGATTTTTAGATGTGTTCCCAAGGGCCAAAATAAATAGCCCCTTGAAAGAGAGCGTCATATGCAGATCTGGCCGAATAAACTCTACTTTTGTGTTAATAAGGGAGACTTCAATCCCCTTTTTTCCTAGTAATAACTTTTTCTTAGGATGCTAGGAATGGATTTATGTTACGACATAGGGAGTGTAGTTTTCTGCCAAGATACACTAACATATGCAATTTTTTTTTTTTTGGTGAAACAAAGGGTGCAAGTTGGGATTGCAAGACTACTCATAGTCTTCTGATGAAAGATACAAATTTCCTTGAGCTGCATGCAAGCATGCAATTCTCTTTCTTTTCTGGATACAAAATGTGATTTTGTGAAACTTTTTTACTTTAGTGCGTAGGGTTATGTGCCACATGCGAAAATCTCTGTAGTTTTGTGTAACTTGGATCATAATATTTTTCTAGATAACGGATTAAAACCCGGCCTCTACATCCAAACATATCCCATACAACTAACATTTATGTGTGGAAGTGCTTGAGTTGTTCTGTGCTTGGTGGTAGTGGTAGATGAAAGGAAGGATAGGGTGGGCAAAATGGACGAGACAAGAGTAATCACTTATATTTTTTCCATAGCTATGTTGTTATAACTAATTCCTTTGTTGGCATATTTTGGTCTCTTGACCCTTTGAACTTGTATATGAATGCAGAAATTTACTAGCTGCGATCAATATTGCAGTTATGTTGTTCGAAATAGCAAGTCCGGTGAGAAATTCTGATATTGAAAATCTCTCTCTCCCTTTGATGTATGGAGCCAAGATAAATGACCTAATACTATCGGGGGAATGGTGGAGACTACTAACACCAATGTGTTTGGTAAGACTGCTATTTTTATGCTAGATTATAGAATTTCAGGCTTATTTGTCCTTAACATAGAAATTTTCCTCTCTTTTTGTTCATATCTATTAGTTTTGGAAGAGAGAAGCTGTTAACATTCCAACAATATTGTTTTAAGCAGAATATGCATTTCAGATTTGCTTATACAAGGCAAGCTTCGTGTGCAATGCGCAAGAGCCCTGTGAGATATATAATTAGAGGGATTACGTGGAGGATTACAGACAAGACAAGAGCACAGGGGATCGCAGTATCCCAAAGAGTACACATAGATTTGCTAAAAGGATTAATAGCAAGAAGAACATGTTTGATGATTATTGGATGCAAATCTGTAGTTATTGAGGTGACATGTGGATAGTGGATTAGGTAAAGGATTGGGAAATATAAATGAATGGAGGATTAGGATGAAATGGTGAGAAAATGGATGGCTAAGATTAAAACTTGCTTTTTGGATGGTGAGGGTATAAATATATCATATCTTAAACTCATTTGCCAAATATGCCCTGAAAAGTACTCCATCCCTAAATATTTGACGCCATTGACTTTTTTAAACATGTTTGACTGTTCGTCTTATTTAAAAAATTTAAGTAATTATTAATTCTTTTTCTATCATTTGATTCATTGTTAAATATACTTTTAGGTAAAGATATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGATGAACGGTCAAACATGTTTAAAAAAGTCAATAACGTCAAATATTTAGGGATGGAGGGAGTATAATCTCATGCTCAGATTGCCCTTATAATATATAGGTGTTCAGGGAGTTGAGAGACATCAGATAGTAAAATGTAGGTTCAGAGAGGAAAATGAGACAATACTGCAATTTTTAGGACCCTCACTACATTTTTTGTATGTTAAGGTAACCTTGAAATACAAAATCTTCTACTTTGTAACCAAAACCGCTCAAAACTACAATGGTCGTGGATTAAGCTAGATGCTTAATCGCATGAAAAAAATTATAAAAACATGACGGGCCAACTGGATTTGAGTGTAAAAAACACTGCCACCTTAGTGAAAAAAATGGTGGTTTTATGTCGAATGGTGTATTTAGACGACTCTGCTAGTTTTGGGTTGTAAAGTAGACACATGTATGTTCAAGTAAGTATTTTTCTCTTCTGACTTATTCTTGTGATTTGAGTTTTGCAGCACTCTGGGTTCTTGCACATAGCACTTGGATGTTGGGTATTACTTATCTTTGGACCTCGCGTGTCTAGAGCATATGGTCAAACGACATTTTTGCTGATGTACATACTTGGGGGAGTTTGCGGGAACTTGACAAGCTATCTTCACACGTCTGAGCTAACCGTCTGTGGCACAGTAAGTGACTTGGTGACCTGTAATATTAATTGGAATTATCATTATTTCAATCTCAATTTCGTCTTTAAGAAATAAGCACGCTTTATTGGGATTTGCATCTCAGATTTGGTTATGTAATTGATAGCTAAGAAGAAATGATCATATATACATATAGCTGTGGCTGCCATCAAAATTGGTTTCATTATGAGACTGTCACGAACTACATGGCAAACTAGAATATATGAATGTAAATGCTAATAAATTCTATATGAAAGGAATTTGAATTGCAAATGTAGTGACCATCTTGCAACCTTCAGAGAAGAGTATATATAGCTTATGTATTGCAGATCCATCATAATGAAATGGATCCATCTTATTATGGTATTTCAAATTTGTCTTGTTAGAGAAAAGTCATTCTAGACGGCATGTTTGTATATAATGGTGTGTACATTAATGCTGCTTCCTAAAACTCAGAACAGGGACCAGTATTTGCTTTAATTGGAGCATGGCTTGTCTATCAAAGCCAAAACAAGGATGCTATTGATAAGAACGTTTCAGAAACTATGTTCAGCCAGGCTGTTGTGGCAACAACTTTGAGCTTCTTATTGAGCAGTTTCGGGAGAATCGACAACTGGTAAACTGATTATTTTTTTTACTAGAAAAGGATGCACCATAAGCATATCTCTAATGACTTCTGTACAAACTCAACTACGTAATATAAACTTTTGCTAATATGCGCCCTTTCTACTGTCATTTTTTTTGGAAGTTTAAGGATATTTTATTAATTTCAGCATCTTTGCTATTTATTTTCTGTAACAATCATGATTTTTTTAAGAAACTTTAAGAATAATTCTAACCAAACCTGTACTGGTAGATATGGCTGGGGAATAAAAAGCTGACAAGAAATCCAACGACCATAATTAAAATGCTATTGTATGAATTTGTTAAATTATCCATGGCAAGCACTGACTCATGATTTTAGTTGTATCGTGTTTGTTATTGCCATATGTACAAACAAGTAATAAGTAGGTGGTTGGGTTGAATTATGGAATATTTTTGTTCAAGCAAATGCACTTATAAGCTAAGGTTATGTATGAAAAATGTATGAAAGAAACATTTTTTTTATCATTCTGTCCGTCAGATTCCAAATTATGCTATAAGGATTACATCTTCAAGCAACCACCATGACAACTGATTTCTATGTGCTCCTGCACATCACAAAGAAAATTTTCAAGAATTTATTCATAGTGAATTATACCAATTTCATTTTTTTTTTGCATAATCATAGTCAAACATCTAAACGTTAGTAGCCAGCTTCTCAGAATCTGGAAAAACTGGTTCTCCAGCTTTTGGCTTCTAGTTCATTTTCTGGATTCTACAATTACAGCTTCTCAGAATCTGTATCAAAAGCTGGATTGTTTGGGGGAGCTTCTGATTCTGGGAGAAGCTGCAGCAGCTAGAAGCTCCCCCAAACAGGCCCATAGGCATACAAAAATATAGGCATGGATTCTGTGGAAACTTATATTTGCCATTGGACAGGGCATAAAAAAATCAGCGAAATCCTGATTAATCTCAAGTTTCAGCAATGCTAAAGTCAATGACAAGAAATTATAAAATATTACTTTTACTGCATAAATAAAGCAGAGCAATAAACTTTATAGAATATTTTACCTTTAGCATATTGCTGCTTTTATCAAGGATATATATATATACCCTCAAACTAATGTCTGTTAAACTGTAGGACACATCTTGGGGCAACAATTTGTGGACTACTTTTCGGCTATTTAACCTGCCCAAGTGTGCAGGTCGACAATGCTGCTAAGAAAGGTCAAAAGGCTGTGGTTCTTGTTAGGCGACAGGCCAGTCCATGGAAATCCATTGCCATCTTCGTCATAAGCATAATTGTGCTTGCTCTTTTCGCCTTTGCTTATGGAACACAAGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008101