Os12g0578500

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0578500| Description = Glycosyl transferase, family 8 protein| Version = NM_001073655.1 GI:115489271 GeneID:4352627| Length = 5271 bp| Def...")
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Gene Name

Os12g0578500

Description

Glycosyl transferase, family 8 protein

Version

NM_001073655.1 GI:115489271 GeneID:4352627

Length

5271 bp

Definition

Oryza sativa Japonica Group Os12g0578500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24139838..24145108

Sequence Coding Region

24140225..24140515,24140896..24141198,24141572..24142159,24142688..24142843,24142934..24142992
,24144376..24144643

Expression

GEO Profiles:Os12g0578500

Genome Context

<gbrowseImage1> name=NC_008405:24139838..24145108 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24139838..24145108 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatccggctgtcgccgagcatgaggagcatcaccatctccagtagcggcatcggcatcggcggcggcaatggcggcggcggaggcggcggcggcggcgtggggagcgggctgctagacctcatgaagctcaaggccgccgcccgccacttctcctaccgcaccgtcttccacaccgtcctcatcctcgccttcctcctccccttcgtcttcatcctcaccgccctcgtcaccctcgagggcttcaacaagtgctcctccctagattgtctaggcagacggttaggtccacggcttcttggtaggggcaacgatggctccatgagggtcatgagggatttgtataggatgcttgacgaaataaattctgaagaagtacctgttgatttgaaggtcccagactcttttgatgaattcatctgggacatgaagaataatgattatgatttaaggtcatttgcttttaggctgaaggcaacaatggagagcatggacagggaattgagaacatcaaggttatcagagcagttaaacaaacactacgcagcaattgctattcccaaaggccttcattgcctttccttgcgtctaactgatgaatactcatccaatgctcttgcaaggaaacaactccctccacctgagttgatccctcgtctttctgacaattcctatctccattttgttttagcatcagataacatccttgcagcctcagttgtggtcagttcaactattaggtcatcattaaaacctggcaggatagttttccatgtcatcactgacaagaagacctatcctgctatgcactcatggtttgctttgaatactctttctcctgccattgttgaggtgaaaggtgttcaccaatttgattggttaacaagagaaaacgtgccagttcttgaagctatagaaactcagcacactgtcagaagtcgtttccatggaaatcaccttgcaagaaatagtgcaggtgatagcccaagggtttttgctgccaagctgcaggcagggagtccaacatatacttcagtgctcaatcatattcgaatatacttgcctgagttgttcccaaacctcaacaaagttgtatttcttgatgatgacgttgttgtccagcgggacttgtcatcactttgggatattgatctaggtgggaaggtaaatggagctgttgagacctgcagaggtggagatacttgggtgatgtccaagaggttcagaaattatttcaatttctcccatcccctcattgccaataacttcgacccttcggagtgtgcatgggcatatggcatgaatatatttgacctgagtgcatggagaaagacatccattaaagataaataccaccattgggtcagggagaatctgagctcaaacttcacactttggaggcttggaacattaccacctggccttatagcatttagaggtcatgttcatcctattgatccatcatggcatcttttaggcttggggtatcaggaaaagacagatatccccagtgttcagaaagcagcagtcatacattacaatgggcaaagtaaaccatggctggatattggttttaagcatctccagccattttggacaagacatgtgaactactcgaatgagttcataagaaactgtcatataatggagccccagttatag</cdnaseq>

Protein Sequence

<aaseq>MQIRLSPSMRSITISSSGIGIGGGNGGGGGGGGGVGSGLLDLMK LKAAARHFSYRTVFHTVLILAFLLPFVFILTALVTLEGFNKCSSLDCLGRRLGPRLLG RGNDGSMRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWDMKNNDYDLRSFAFRLKA TMESMDRELRTSRLSEQLNKHYAAIAIPKGLHCLSLRLTDEYSSNALARKQLPPPELI PRLSDNSYLHFVLASDNILAASVVVSSTIRSSLKPGRIVFHVITDKKTYPAMHSWFAL NTLSPAIVEVKGVHQFDWLTRENVPVLEAIETQHTVRSRFHGNHLARNSAGDSPRVFA AKLQAGSPTYTSVLNHIRIYLPELFPNLNKVVFLDDDVVVQRDLSSLWDIDLGGKVNG AVETCRGGDTWVMSKRFRNYFNFSHPLIANNFDPSECAWAYGMNIFDLSAWRKTSIKD KYHHWVRENLSSNFTLWRLGTLPPGLIAFRGHVHPIDPSWHLLGLGYQEKTDIPSVQK AAVIHYNGQSKPWLDIGFKHLQPFWTRHVNYSNEFIRNCHIMEPQL</aaseq>

Gene Sequence

<dnaseqindica>4594..4884#3911..4213#2950..3537#2266..2421#2117..2175#466..733#tcttcttcttcgtctccgtctccgtctccgtctcgtcgccgcctaatcccccaccacctcgaaacccagatcaaaccctccctccccttccacccccgcacgatccacctaccccctccccccttcttctccctcgcgcgcgcacgcagctagctagctaccgcgaggaaccgaatccaatcgagctcaggacgaggcggaggaggagaaaccaccccggattctcttgatccggagtccaagaaaccacggggtagtgccgtagtggaagcaatcaatcagcagcagcaggatcgacccccccccccttcttgattgctggtttggccggcggcaatgccggatccggccgggctgccatggctgcggcgtctgtgagccgcgtcgtcggcgcgtgtgaatgctcgtcgggtctagacggtttgaggaggaggagtggggagagggaggggggcggcggcgacgatgcagatccggctgtcgccgagcatgaggagcatcaccatctccagtagcggcatcggcatcggcggcggcaatggcggcggcggaggcggcggcggcggcgtggggagcgggctgctagacctcatgaagctcaaggccgccgcccgccacttctcctaccgcaccgtcttccacaccgtcctcatcctcgccttcctcctccccttcgtcttcatcctcaccgccctcgtcaccctcgagggcttcaacaagtgctcctccctaggtaccttgccgccctcttcatgaaatgctcttcaaatggtcttgaaatggtgttactgtgcccctgcacagctagttcttcaggagtagtttatgtagcttactggtggtataccagaccagggatgtgcaatgtgcatgccgcggcggcgtgaattacacgtttcggtagataacaaccgctgggatgctcataattttcttgtgttttaaccgaaactcatgaaatgtactacacgcctgctttggtgctatgatcacttgccgtcactagattataggggcttatttgggcatgataatgatagtggcattgttttttttttgttgcatactatttgcttagttggctgctttaattgctttcttggttcacctgatgttccaaaactgctcgttttggcctcctatagaaagggttagtacaaatggggttgctttgcttaccacttatgtggcaacttaatggctgcttctatcactcttagatgttaaggtgttcatgataatgatatcttgatggttcattgagaaattaggcacatcacattgacacggtagaccaacacttccgtaagtaaactatgaatgtgaaatatatgtaacatcacttgttttctactccgtatgttagaaaatgaaacaacttttctccattgttacttccgatacttcatacttggtgagttggagctactatgaaggctcatactgaaccagccagaataccaaagtgtgcccctcgaatgcttttattttgttcgaataagtcattactttagcctaaactatcctcagacaaattccaatccataagttacgttactaatcataatgtacacatttataaacaaggcccatttccctatcatctaatccacttaatttgctattacatcatgatcctgctaaataatctgttacatgcaccccccttggttgtttttctgtacatggacctgaaatcttgccctatgttcatatgttggattcaaggttgcagcagactatgtttgtctttgatcataaaaatgtaaatagtggtaattcccctgtctggagaaaagagactgctgatcttatcagttctaaatgtgtaacagcatttagtagaagctttagttttatttttctcaaatggaatcttaggggttaagcagacattgttctaaagctcaggggggttatctggactttcgccttaactctactttagttggtgcctatgttgttatcctatcttttgtcgatgatactttatgtacttatctttctctttgttgtgctgcctgatccatcataatttatacatgttcaaatttgttcatagttgaaatttgtgtggtcaatgacttgctactaattcatgagttgttactatcagattgtctaggcagacggttaggtccacggcttcttggtaggggcaacgatggctccatggtactcacatctcctctgatattacccttctcctttcaattttgtggatttgcttagttccttatttaatttctatattctaatgcgcagagggtcatgagggatttgtataggatgcttgacgaaataaattctgaagaagtacctgttgatttgaaggtcccagactcttttgatgaattcatctgggacatgaagaataatgattatgatttaaggtcatttgcttttaggctgaaggcaacagtaagtttctttccctgttttgaagtactgtccatattttctatttctgtccaagcatgtgaattgcaaagtttctcagtaggttatgttggtggtgacttgtgcttgagaatgaacgtcatgattcctttgagtgtgtttttactttggaatccactgtaaagcttgtgtcacttcttgggtaatattattttatagcagttatgttattgtgttggatggtgatggacaagctatcttgtacataaaactgttattttcttgccattatttacaagcgttacatgctaaactggtagcttctacatagctaaactctaaatatcaaggctcactatagtagtgatgaaaataaataaatatcttgtttacaccacatgtatacaacaggtagtatttaatgattctcatccttctaaagttgccaagcagaacactaatggacttgaaggtccctaacatcatgctaatatgcttctattgttcagcaagcactaatattttcattgcctgcataacattacgcagatggagagcatggacagggaattgagaacatcaaggttatcagagcagttaaacaaacactacgcagcaattgctattcccaaaggccttcattgcctttccttgcgtctaactgatgaatactcatccaatgctcttgcaaggaaacaactccctccacctgagttgatccctcgtctttctgacaattcctatctccattttgttttagcatcagataacatccttgcagcctcagttgtggtcagttcaactattaggtcatcattaaaacctggcaggatagttttccatgtcatcactgacaagaagacctatcctgctatgcactcatggtttgctttgaatactctttctcctgccattgttgaggtgaaaggtgttcaccaatttgattggttaacaagagaaaacgtgccagttcttgaagctatagaaactcagcacactgtcagaagtcgtttccatggaaatcaccttgcaagaaatagtgcaggtgatagcccaagggtttttgctgccaagctgcaggcagggagtccaacatatacttcagtgctcaatcatattcgaatatacttgcctgaggtacaataattttttctaacttattttcagtacagtttcatcagctttggcataattgataaacaattaagcatgtgttgtcatatgtaatagaaacctgagtttaagcaatcgaaatacaacagatttgaagtttctttccttgttttaaatgtaaataatatatatgtatatactctgcataattttttttcttgcagaaatctgtattgtgcaacaatttataatgttctgtagttagttggactttcccatctgtagttgtgcaaatatattctaactgcatcatttattttttcaatctacctcatttttttcctgaaagatttgtagttgtgcaaatttattctaacttgcactttgtgaaatgcagttgttcccaaacctcaacaaagttgtatttcttgatgatgacgttgttgtccagcgggacttgtcatcactttgggatattgatctaggtgggaaggtaaatggagctgttgagacctgcagaggtggagatacttgggtgatgtccaagaggttcagaaattatttcaatttctcccatcccctcattgccaataacttcgacccttcggagtgtgcatgggcatatggcatgaatatatttgacctgagtgcatggagaaagacatccattaaagataaataccaccattgggtcagggaggtaaaacatcgatgccactaccttttcatctgcacacccccagttgtgttctacacatttttttccattttatagtaactaagtgaatattttctgatattggaatttggaagtctaacaggctccttgtttaaacataacgctctttttgtttgtggcaacgttctaaaagcaactatataaaattaatgcagagctgctgatatgttaaaaactagggaatttctcttgatcacttcaaaaggcatatggaaatatgctggacactatttttaatgatcatatatttgaccaatgcttggtccaaattttaacgttctaaataagctctgatgagtttgagctacctaccttactcatgctaccttctttccctgcagaatctgagctcaaacttcacactttggaggcttggaacattaccacctggccttatagcatttagaggtcatgttcatcctattgatccatcatggcatcttttaggcttggggtatcaggaaaagacagatatccccagtgttcagaaagcagcagtcatacattacaatgggcaaagtaaaccatggctggatattggttttaagcatctccagccattttggacaagacatgtgaactactcgaatgagttcataagaaactgtcatataatggagccccagttatagattggctagataaaccattctataaatattggcgtaaattatggaattaaattcattattttggagaccaataccagatagtccagaaggatacccacgaaatgctctctgaacagtaacccggagctggtacacgagcggatggagaatatttaatgaacacaaaggaaatattttcttcctatacactaggatctctttccctttatttattccatttgtatcatagctcatgaaattacagtattgtttaggatggttcttttgtatttattggagcaatataaattgcctgatttggcgggattgatggtaggcccatcgttattgtaattgttgggtatccagttcaccacatgaacaacatgggccagattttgattttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0578500, RefSeq:Os12g0578500