BGIOSGA008109

From RiceWiki
Revision as of 03:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008109| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008109, complete gene.| tag = OJ1116_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008109

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008109, complete gene.

LocusTag

OJ1116_E03.2

Ensembl Transcript ID

BGIOSGA008109-TA

Ensembl Protein ID

BGIOSGA008109-PA

Length

2439

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:14451380..14453818

Sequence Coding Region

14451380..14451524,14451633..14451788,14451878..14451964,14452119..14452250,14452373..14452438
,14452653..14453818

Genome Context

<gbrowseImage1> name=IndicaChromosome02:14451380..14453818 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:14451380..14453818 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCCGTCGAGCGCGCCAAGCTGGTGCGGAGCCTCCGGCAGGAGTCGCGGCGGCTGCGCCTGCTCGTCCTCGTCATCGGCTTCTTCCTCGTCACACTCACCTTCGTCGTCATCTCCAAGCCCGACGCCCTCCTCTTCAACCTGAACGGCCGGCTGTCGGTGGATCATGCGCCGCGCTCGCTCCTGATTCGCCAGCGGATCCACGCCGACTCCAGGAGATCCGCCGATACCTTCCCCGCCGCCGAGGATCCCAAGGTGGTGGACGAAGACGAAGGCGCCGAGGACGCCACCGCCAAAGGGACTAGTGAGGAGGAGAAGAGGCTACTCAGTAGTGAGCCCGAGCAAGGCAAGAACGAGGAGGCGGCCACTGCATCTGAGGTGTTAGGTGGTGGAGGCGAAGAGGATAATAAGAACGGCGAGGAAGAGGGGCACACACAGCATAGCAAGGTGACCCTCCCGACTGTTTCCAATTATACCATCCGTGATGCTGAAGACACTGACAATGGCAAGCAAGAAGATGGCAAACCGAATGAAAAATATGAATTTGAGATGGACGCGGACAAGGGAGACAATGTGGAACCAGAAACTGATAATGAGGAGTGGAACAAGAAACCACTATGTGATTTCTCAAACTTCAGAGCAAATGTCTGTGAGATGCGGGGCAACATTAGGATTCATCCCAATGCAAGTTCTGTCATGTACATGGAACCTGCCAGTTCAAAGAGAGAGGAGATATGGAAAGTTAAGCCTTACCCTCGTAAAGGTGACGAGCTCTGCCTCGGCCATATTACAGAGATAACCGTGAAATCAAGCAAAGTGGCACCTGAGTGTAGCAAGTATCACAATGTGCCTGCAGTGGTCTTTGCTCTGACTGGATACACTGGAAATCTATTCCATGACTTCACCGACGTGCTTGTCCCTCTTTTCACAACCGCAAGCGAATTCAATGGCGAAGTTCAATTCCTAATCACAGACATGGCTATTTGGTGGACAAGGAAGTATAAGGTGGTGTTTGATAAGCTATCCAAGTACCCCTTGATTGACTTCAACAATGACGATCAAGTGCATTGCTTCAAGCATGCAATTGTTGGCCTTCATGCTTACATGGAGTTCACAATTGACTCATCAAAAGCTCCACATAACTACTCAATGGTGGATTTTAATAGGTTCATGCGCAGGACCTACTCACTGCCTAGGGATTTTGTAACTGCGCTTGGTGAGATTCCCAAAGCCAAGCCAAGACTGCTCATTATATCCAGGCAGAGGACAAGAATGTTTCTCAATCTTAACGAGATAGTGGCGATGGCTGAGGAGATAGGTTACGAGGTGGTGGTTGAAGAGGCCAATGTGAGCTCTGATCTCTCCCATTTTGGCAAGGTTGTCAACTCTGTTGATGTGATGATGGGTGTCCATGGTGCTGGACTCACCAACTGTGTGTTCTTGCCACAAAACGCTACATTGATTCAGATTGTGCCATGGGGTGGACTAGACTGGATATCAAGAATTGATTTCGGCAACCCAGCGGAACAAATGGGCCTGCGTTACAAGCAGTATAGCATTGGTGTACATGAAAGCAGCCTTACTGATCAATATCCCCTAGATCATGAGATCTTCACAAATCCTCTTTCGTTCCACAAACATGGATTTGAATTCATCAGGCAGACCTTCATGGATAAGCAAAACGTCAAGCTTGATTGCAACCGATTCAAGCCTGTACTCTTGGAGGTTCTTGATCAATTGAATCAATAG</cdnaseq>

Protein Sequence

<aaseq>MKPVERAKLVRSLRQESRRLRLLVLVIGFFLVTLTFVVISKPDALLFNLNGRLSVDHAPRSLLIRQRIHADSRRSADTFPAAEDPKVVDEDEGAEDATAKGTSEEEKRLLSSEPEQGKNEEAATASEVLGGGGEEDNKNGEEEGHTQHSKVTLPTVSNYTIRDAEDTDNGKQEDGKPNEKYEFEMDADKGDNVEPETDNEEWNKKPLCDFSNFRANVCEMRGNIRIHPNASSVMYMEPASSKREEIWKVKPYPRKGDELCLGHITEITVKSSKVAPECSKYHNVPAVVFALTGYTGNLFHDFTDVLVPLFTTASEFNGEVQFLITDMAIWWTRKYKVVFDKLSKYPLIDFNNDDQVHCFKHAIVGLHAYMEFTIDSSKAPHNYSMVDFNRFMRRTYSLPRDFVTALGEIPKAKPRLLIISRQRTRMFLNLNEIVAMAEEIGYEVVVEEANVSSDLSHFGKVVNSVDVMMGVHGAGLTNCVFLPQNATLIQIVPWGGLDWISRIDFGNPAEQMGLRYKQYSIGVHESSLTDQYPLDHEIFTNPLSFHKHGFEFIRQTFMDKQNVKLDCNRFKPVLLEVLDQLNQ</aaseq>

Gene Sequence

<dnaseqindica>1..145#254..409#499..585#740..871#994..1059#1274..2439#ATGAAGCCCGTCGAGCGCGCCAAGCTGGTGCGGAGCCTCCGGCAGGAGTCGCGGCGGCTGCGCCTGCTCGTCCTCGTCATCGGCTTCTTCCTCGTCACACTCACCTTCGTCGTCATCTCCAAGCCCGACGCCCTCCTCTTCAACCGTACGCCATGCCGTCGCCGCTTCTTCATCATCTTCTTCTTCTTTTTCTTCTTGGATCCTTGGATCGATGGTAACACCAAGCGCCTCACTCGTTTCTTTGAGTTCGCAGTGAACGGCCGGCTGTCGGTGGATCATGCGCCGCGCTCGCTCCTGATTCGCCAGCGGATCCACGCCGACTCCAGGAGATCCGCCGATACCTTCCCCGCCGCCGAGGATCCCAAGGTGGTGGACGAAGACGAAGGCGCCGAGGACGCCACCGCCAAAGGTGAAAAGCTCCAGAGCTAATTGCCGCCTTGCTGCAGTCAGCAAATCTTGGGCCTAGCGTACTGACCTTTTCGTTATATATGATGATAGGGACTAGTGAGGAGGAGAAGAGGCTACTCAGTAGTGAGCCCGAGCAAGGCAAGAACGAGGAGGCGGCCACTGCATCTGAGGTGTTAGGTGAGCCGTCACCTTCCAATCCGTCAATAATTTCCTTGTCTAGCTCTGTCTCTGGATGCTTTGATTCACGGGGTCTTGAGAGGTCAAGAGAGATTTGGGCGCCATCAATTGATGCTTGCTTTATGTATGAGTACTTTGGTGGTGGGATGTGCAGGTGGTGGAGGCGAAGAGGATAATAAGAACGGCGAGGAAGAGGGGCACACACAGCATAGCAAGGTGACCCTCCCGACTGTTTCCAATTATACCATCCGTGATGCTGAAGACACTGACAATGGCAAGCAAGAAGGTAGTAGATGCTGTTTCTTCTTGTGTTTCTTGGACTTTACTTGTAGTACTAGCTGTTTTGGTACTTGTTAAGCTGGTGCTTACAAGTTCTTGGTGGGTATGATGGCCCTACTTTGTCTGCAGATGGCAAACCGAATGAAAAATATGAATTTGAGATGGACGCGGACAAGGGAGACAATGTGGAACCAGGTTAGGATTTTAGATTTCAATAAATGCCGACAGGAAAATGGACCATCTGAATTTAGTGATTTTGGCCATAGATGCAAAACCCTATTTTGGTATCCTAGACCAATGGCATCATACACTTCAGATTCCTAACTACTAGATTGAACCTTAAATTAGACTGATTATGCTTCATTCAGTCTTTTGTTTCTGCTCTTTCATTGATGATACTCTATTGCAGAAACTGATAATGAGGAGTGGAACAAGAAACCACTATGTGATTTCTCAAACTTCAGAGCAAATGTCTGTGAGATGCGGGGCAACATTAGGATTCATCCCAATGCAAGTTCTGTCATGTACATGGAACCTGCCAGTTCAAAGAGAGAGGAGATATGGAAAGTTAAGCCTTACCCTCGTAAAGGTGACGAGCTCTGCCTCGGCCATATTACAGAGATAACCGTGAAATCAAGCAAAGTGGCACCTGAGTGTAGCAAGTATCACAATGTGCCTGCAGTGGTCTTTGCTCTGACTGGATACACTGGAAATCTATTCCATGACTTCACCGACGTGCTTGTCCCTCTTTTCACAACCGCAAGCGAATTCAATGGCGAAGTTCAATTCCTAATCACAGACATGGCTATTTGGTGGACAAGGAAGTATAAGGTGGTGTTTGATAAGCTATCCAAGTACCCCTTGATTGACTTCAACAATGACGATCAAGTGCATTGCTTCAAGCATGCAATTGTTGGCCTTCATGCTTACATGGAGTTCACAATTGACTCATCAAAAGCTCCACATAACTACTCAATGGTGGATTTTAATAGGTTCATGCGCAGGACCTACTCACTGCCTAGGGATTTTGTAACTGCGCTTGGTGAGATTCCCAAAGCCAAGCCAAGACTGCTCATTATATCCAGGCAGAGGACAAGAATGTTTCTCAATCTTAACGAGATAGTGGCGATGGCTGAGGAGATAGGTTACGAGGTGGTGGTTGAAGAGGCCAATGTGAGCTCTGATCTCTCCCATTTTGGCAAGGTTGTCAACTCTGTTGATGTGATGATGGGTGTCCATGGTGCTGGACTCACCAACTGTGTGTTCTTGCCACAAAACGCTACATTGATTCAGATTGTGCCATGGGGTGGACTAGACTGGATATCAAGAATTGATTTCGGCAACCCAGCGGAACAAATGGGCCTGCGTTACAAGCAGTATAGCATTGGTGTACATGAAAGCAGCCTTACTGATCAATATCCCCTAGATCATGAGATCTTCACAAATCCTCTTTCGTTCCACAAACATGGATTTGAATTCATCAGGCAGACCTTCATGGATAAGCAAAACGTCAAGCTTGATTGCAACCGATTCAAGCCTGTACTCTTGGAGGTTCTTGATCAATTGAATCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008109