Os12g0578800

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0578800| Description = Similar to ZPT2-11| Version = NM_001073658.1 GI:115489277 GeneID:4352630| Length = 3686 bp| Definition = Oryza sati...")
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Gene Name

Os12g0578800

Description

Similar to ZPT2-11

Version

NM_001073658.1 GI:115489277 GeneID:4352630

Length

3686 bp

Definition

Oryza sativa Japonica Group Os12g0578800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24156071..24159756

Sequence Coding Region

24156475..24157566

Expression

GEO Profiles:Os12g0578800

Genome Context

<gbrowseImage1> name=NC_008405:24156071..24159756 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24156071..24159756 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccaagaggaaagccttggaagcattgttgcaacaagtgcgacaagagcttccgttcagggaatgctcttggaggccacatgtcctgccacaggagtgttggtaatcagccaaagagcacgtcaagcccacccactgttgttgatctgcacatgccactgctgagttcctgtgatgataatcttttgcttttgcccccagaaacacaatgccagatgtgctcaaaggtgttctccacctccggatcgctgagggagcacatgatgatgcacggtggggagaaggtggtggtcaaggctgaggaagaagctgccgggctgattgaagcactgggcattgctgatagcatgcaagatgtaatggtgttttcttcagtgaagcgtaagcgatcattccgatcaaagaggcagacaccagcactcagtttggaggagatagaggctgcagatgctctcctactgctttcagggtgctttgacaagacttcagcttatgaggattgctatctgggagatatagaagacagtagcttgagatccattgtgctgacagaggttaacatgaatgccgtggatcgttgttcggttcgatctgttggctccaaggagccaataaatgataataactcaggttacaaggattgctatggacaaagtgacaaggaaaactgtttgatcgttcccaaggaggagatggatccaaatgattttgatcatgagctggttagagatgctgctctcaggaaaccaagaaccgacaattcagatgaggagatgaagtttggtgatcttccagctgctgctatgaaggacaacagccaccgttgcaatacctgcggaaagtcatttggatcagggcaggcactgggaggccacatgcgacgtcattatgttcggaagtgcaatcgtcaacggggggttgctgaccacgctggttctgttcttatgaaagtgcaaaagctgaagcttagattggaccccatcttgtttgatgtcacacttccagctctcactgatggagactgctgcatttctgtgggtgtgaagcctgaacctcagctgtggtgtgtcacgagcaatcttcagtga</cdnaseq>

Protein Sequence

<aaseq>MAPRGKPWKHCCNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSS PPTVVDLHMPLLSSCDDNLLLLPPETQCQMCSKVFSTSGSLREHMMMHGGEKVVVKAE EEAAGLIEALGIADSMQDVMVFSSVKRKRSFRSKRQTPALSLEEIEAADALLLLSGCF DKTSAYEDCYLGDIEDSSLRSIVLTEVNMNAVDRCSVRSVGSKEPINDNNSGYKDCYG QSDKENCLIVPKEEMDPNDFDHELVRDAALRKPRTDNSDEEMKFGDLPAAAMKDNSHR CNTCGKSFGSGQALGGHMRRHYVRKCNRQRGVADHAGSVLMKVQKLKLRLDPILFDVT LPALTDGDCCISVGVKPEPQLWCVTSNLQ</aaseq>

Gene Sequence

<dnaseqindica>2191..3282#aagcggcgcggcgagcagcagccggcgaggcaggatgaacctggcgcagtgtcgcgtccagattcataggccgcgccgacctataagtacactcgcggggcacgctctctctctctccgaggattgcggttgcaagcaggataaacggccaccggtaggcgtcggcggagaggagaggagcaagagagggtgggaaggagaggcacctccggattaattcctccgcgggagctggatattgtgagggaatcgaggtgggtttcttggggtggggattgcggggggttcttggtttttgatcgggcaatgcggtttttggttctttggtgttcgcgtctctgttcttggttggttggtttggtgctgttcgtggctaatttctcggtgttgcttccggtttcggttgagttttgcttcctctcgagtgaggatttgagtgttttggtgagtgttcttggatcatccgcgtcttgctttgagggctaattcgagttgttggttgtcgtttcagcgatcgagtcgtcgtcgtcttcccctgagcaatccggacgcacgcgccccccgcctgttctgcttccatcttctccacgcggatcggcgagacaagaatcaggaagcacccaggtaaagaacaccagactcacttcacttgttgttgcaaccattatggccccttctgtcgttcctggactatctgatcgaacgccatctgtgtgttcgcgcaaatgcttcaaaggagcaggaattagtggtttcagttcatgtgtgcttcatcttgcgtctcacaaacgttcttgccgaccttgcagttttctggaattccagctactataacacaagccatagccatttcacttgttgttgagttgttgctttttatgtttattattgtctttcctgaactactccttcaattgctaacttggtgattgcaaacatgcttcaaagaagcaacattagctgagttcatatttgcttttccaattttttttgccactgtagatagtgattctgcctttgttttatatacagcaagctgaagaaacaatagccgagttcatgtttgctttatcttacaatgttcatagaatatccagtttggccactgtagaaagtgattctgcttttccatacagcaagctgcagatcttttttttttcccttggtggtgaaggccatggttcttgatgcattacttggtttgcttccatggcagagcagttctgtagtttgttcagtcacttatcctatgtggttctgaattttacctctgggttgagaattggagcagtttaatgagctttcttgatcgcttgcacctgctttgagggctaattcacttcacgcattcttttttcagcgattgagtcgtcatctttccctgagcaacccggagtgccccacctattctgcttcctcttctccacacggatcgtcgagacaagaagcaagaagcatccaggtaaagaacgccatgctcacctcacttgctgttgcaaccattagggccctttctgttgtccctgtactatctgatgaaatgccatctctgtgttcacgcaaatgcttcaaaggagcaggaaattagtggtttaagttcatgcttgcttcatcttgtgtcacactgtgttcttgccatccagatatggctgaagccataacttcttcactggttgtaaggttgttgactcgttgctgtatgttattattgtacttcctgaaattttccttcaaatgctaacttagtggttgcaaacgtgcttcaaggaagcaacaatatctgagttcttgttgctttgttttacggtgttaaatacagtatccattttgcttacagtagatagtgattctgcggttttataaagaaaactgacgattgatttcccctgagtggtgaaggccatggttctggatacattgtttgtttccatggcagagcagttatgtagtttttcttttgtcactagtactatatgcgcctgtgatgctagttcttactaatattgtgttttgtgttgttaatataaatatatcttggtgaaaatttctgttttgacattcatattgtacatactcagtaagctttaaaattatctgacaataaaatgcgtatgatgcagcaattagtgaatccatgttttcttccttatgctatgttctaacttagtgtaactttccaatgatacagatatggcaccaagaggaaagccttggaagcattgttgcaacaagtgcgacaagagcttccgttcagggaatgctcttggaggccacatgtcctgccacaggagtgttggtaatcagccaaagagcacgtcaagcccacccactgttgttgatctgcacatgccactgctgagttcctgtgatgataatcttttgcttttgcccccagaaacacaatgccagatgtgctcaaaggtgttctccacctccggatcgctgagggagcacatgatgatgcacggtggggagaaggtggtggtcaaggctgaggaagaagctgccgggctgattgaagcactgggcattgctgatagcatgcaagatgtaatggtgttttcttcagtgaagcgtaagcgatcattccgatcaaagaggcagacaccagcactcagtttggaggagatagaggctgcagatgctctcctactgctttcagggtgctttgacaagacttcagcttatgaggattgctatctgggagatatagaagacagtagcttgagatccattgtgctgacagaggttaacatgaatgccgtggatcgttgttcggttcgatctgttggctccaaggagccaataaatgataataactcaggttacaaggattgctatggacaaagtgacaaggaaaactgtttgatcgttcccaaggaggagatggatccaaatgattttgatcatgagctggttagagatgctgctctcaggaaaccaagaaccgacaattcagatgaggagatgaagtttggtgatcttccagctgctgctatgaaggacaacagccaccgttgcaatacctgcggaaagtcatttggatcagggcaggcactgggaggccacatgcgacgtcattatgttcggaagtgcaatcgtcaacggggggttgctgaccacgctggttctgttcttatgaaagtgcaaaagctgaagcttagattggaccccatcttgtttgatgtcacacttccagctctcactgatggagactgctgcatttctgtgggtgtgaagcctgaacctcagctgtggtgtgtcacgagcaatcttcagtgaaccaatccggtgctcgatgtggtctgaaactctctgttcttttggtgaaatctggggtgttgtctgaaactggtacagttccttgagctgtctgtagactgtaggtagttcatcagccaggaagcaaaaaaaacccatgttgtcttccgatagatagtcacaagctcacaatactgataggagtagttctcttgactgacaaacttccatggatagcaaaggccaggatcttgagtgatagcttggttactgaacagtgaagctgatttccatgttgcatgcaatgcaatggacgagcttgtcattttttttttgtaccaacaatctgtaaaatcagttttgctttgctttctgtaaatgtctgtaccttgattcttgaaaggaatgctggtcagaatgaggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0578800, RefSeq:Os12g0578800