BGIOSGA008160

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Revision as of 03:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008160| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008160, complete gene.| tag = OsI_071...")
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Gene Name

BGIOSGA008160

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008160, complete gene.

LocusTag

OsI_07118

Ensembl Transcript ID

BGIOSGA008160-TA

Ensembl Protein ID

BGIOSGA008160-PA

Length

5701

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16641716..16647416

Sequence Coding Region

16641716..16641970,16642180..16643128,16643231..16643346,16643453..16643559,16646465..16646542
,16647110..16647416

Genome Context

<gbrowseImage1> name=IndicaChromosome02:16641716..16647416 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:16641716..16647416 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGCCGGCGAGCTGGAGGGCTTCCGGCGCCTGTCCGGCCTCGCCTTCGACGAGCTCTCCCGGCGGGACCTCTCCTCCGCCTCCGGCCCGCCACCCGCCGACCTCCCCACGCTCCTCCGCCTCTGCCTCCTGTCGCTGCCTCTCTCCGCCGACGCGGAGCTGGCGTTACGCCGCTGCACCCGCCTGCTCGCCTCCCTCCGCGGCATCCTCTGCCGCGACCTCGACCCCTCACTGCTCCCCGCCCTCGAGGTGTTCCTGGACAATCTTGTATCTAGCAACCAACTGATGACTTGCTTTACTGCGGCCAATGCTGTTATGCCGAGACGCTCAAGAATCACCTCTCTGGGTTCGGTGTGCAGTGGTGGCAACCTTTTCGTCATGGAGCTCATGTCGCATCACTTCATTTCATCTGTGCAAGACGAGGAGGGGTTTTTGAGCGCACTATCATGGTCAGCGAAGGCTAAGTTGGAAGTTCCAGAAATTGGCCTTTCAGGAGCTCTTTCCCTGCTCCACAAGAGCTGCTTGCTCTCTATTCCGCCTGCTGTCCAGGCTCATTTCTTACTGCTGGCGTGCAGATGTGCTGACAATGGGGATCTGAACATGAATTTGCTGGCGTTCGAGCATGCCATGGATGTCTATTTGAGTTACTTACCTGCATTAGGTGTTTTCAGAAGAACTAGTGGTGTAAAAAGGCCGTTGGGTTGTTCCATGAAAAGAAGACCTTTGAGCTCTTGTTTACAGGCTGCAACTCATCAGAAGCTAGCCTGTGATATCAATAGGCTGGTTTTGTTTTGCAACTTGCACTCCAATGACGACTTGCCCATCAATGAGAGTGATATAGTCCGTTTCATTGAAGAGAACCAGCAAGTACTTCATGAACAATCTAGGCAGGACACTATTACTGCTGTGAAAAGCATAGTGTCAAATGTCCTTCTTTTGGCAAAGCAGGAAGAGATGGATAGATTATATCGTAATGTTTCAGAGGAGATTATCTGCCTTGCTGCAGCACTTAGGCTAATGGGCTCCTCTTTTATACGAATTATGCATTGCATTAGGCAAATGACAGTGGGAGATGGCAGCCAGACCACACATTGTTTAGAACCTTGCAAGGTGTTTAACATCGTATCAGAAACCATCAGCTTACTTGGGCACTATGAACCTAATGAGCTTCAGAGAAATGACTTATTTGATACCATTGGTTGCATTTTCATGATGATGATGGCCAATCTTTGTGCTACTGAAATGTATCATTTTCTTATTGATGGTTCAAAAGCATCTAAAGTTCGTTGTGCTGATCAAGATGGTAGTTTGAAGGCCTCTGTTCCGAGAAAATCTTCTACAGTGATAGCATTACGGTTTCAGAACACACAGCAAGTTTATATTCAAGATAAGCTTGGCCCTGGCTTTGGTGAGGTCTGCAGTCTAGTTTGCAAAATAGGATGGACGCTGTTGGTCGGGTATTCAGATGTAAATGAAGGGCAATTGAAGGGTATCCCGATGGCATTGCCTCGGAGGCAAGGTTGGTATCTGCTACGGCCGCAAGCCCGCAACGCCGATGACCTGCCGGCGCCGGACAAGGTGGTGCAGCTCATCCAGCAGCAGTCGCTCAAGTACGCGCGCATCTACGACACCAACATCGACGTCATCAAGGCCTTCGCCAACACCGGCGTCGAGCTCATGGTCGGCGTCCCCAACTCCGACCTCCTCCCCTTCGCGCCGTTTTCAATGAGAACAAGAAACCGGGAATTGAATCTGAGAGGAACTGGGGGCTGTTCTTCCCTGACCAAAGCTCTATATACAGTATAG</cdnaseq>

Protein Sequence

<aaseq>MADAGELEGFRRLSGLAFDELSRRDLSSASGPPPADLPTLLRLCLLSLPLSADAELALRRCTRLLASLRGILCRDLDPSLLPALEVFLDNLVSSNQLMTCFTAANAVMPRRSRITSLGSVCSGGNLFVMELMSHHFISSVQDEEGFLSALSWSAKAKLEVPEIGLSGALSLLHKSCLLSIPPAVQAHFLLLACRCADNGDLNMNLLAFEHAMDVYLSYLPALGVFRRTSGVKRPLGCSMKRRPLSSCLQAATHQKLACDINRLVLFCNLHSNDDLPINESDIVRFIEENQQVLHEQSRQDTITAVKSIVSNVLLLAKQEEMDRLYRNVSEEIICLAAALRLMGSSFIRIMHCIRQMTVGDGSQTTHCLEPCKVFNIVSETISLLGHYEPNELQRNDLFDTIGCIFMMMMANLCATEMYHFLIDGSKASKVRCADQDGSLKASVPRKSSTVIALRFQNTQQVYIQDKLGPGFGEVCSLVCKIGWTLLVGYSDVNEGQLKGIPMALPRRQGWYLLRPQARNADDLPAPDKVVQLIQQQSLKYARIYDTNIDVIKAFANTGVELMVGVPNSDLLPFAPFSMRTRNRELNLRGTGGCSSLTKALYTV</aaseq>

Gene Sequence

<dnaseqindica>1..255#465..1413#1516..1631#1738..1844#4750..4827#5395..5701#ATGGCCGACGCCGGCGAGCTGGAGGGCTTCCGGCGCCTGTCCGGCCTCGCCTTCGACGAGCTCTCCCGGCGGGACCTCTCCTCCGCCTCCGGCCCGCCACCCGCCGACCTCCCCACGCTCCTCCGCCTCTGCCTCCTGTCGCTGCCTCTCTCCGCCGACGCGGAGCTGGCGTTACGCCGCTGCACCCGCCTGCTCGCCTCCCTCCGCGGCATCCTCTGCCGCGACCTCGACCCCTCACTGCTCCCCGCCCTCGAGGTACGCGCTCCGTTCGCTTCGCCACCATTGGGTTGTTTTTTTTTGCTCTCAATTCCGGAATCAGAATGTGATGCTCAGGGGACAACTGAAAATTTCCCCTTACCGGCGTAAATAACTTTTTCCCCTATGAATAGTTAGGTGAGAGCTCATCCGTGACAACGGATAGAGAGGTATTTTTGTTAATTTCTTGTTTGGTTTATATGTTGTAGGTGTTCCTGGACAATCTTGTATCTAGCAACCAACTGATGACTTGCTTTACTGCGGCCAATGCTGTTATGCCGAGACGCTCAAGAATCACCTCTCTGGGTTCGGTGTGCAGTGGTGGCAACCTTTTCGTCATGGAGCTCATGTCGCATCACTTCATTTCATCTGTGCAAGACGAGGAGGGGTTTTTGAGCGCACTATCATGGTCAGCGAAGGCTAAGTTGGAAGTTCCAGAAATTGGCCTTTCAGGAGCTCTTTCCCTGCTCCACAAGAGCTGCTTGCTCTCTATTCCGCCTGCTGTCCAGGCTCATTTCTTACTGCTGGCGTGCAGATGTGCTGACAATGGGGATCTGAACATGAATTTGCTGGCGTTCGAGCATGCCATGGATGTCTATTTGAGTTACTTACCTGCATTAGGTGTTTTCAGAAGAACTAGTGGTGTAAAAAGGCCGTTGGGTTGTTCCATGAAAAGAAGACCTTTGAGCTCTTGTTTACAGGCTGCAACTCATCAGAAGCTAGCCTGTGATATCAATAGGCTGGTTTTGTTTTGCAACTTGCACTCCAATGACGACTTGCCCATCAATGAGAGTGATATAGTCCGTTTCATTGAAGAGAACCAGCAAGTACTTCATGAACAATCTAGGCAGGACACTATTACTGCTGTGAAAAGCATAGTGTCAAATGTCCTTCTTTTGGCAAAGCAGGAAGAGATGGATAGATTATATCGTAATGTTTCAGAGGAGATTATCTGCCTTGCTGCAGCACTTAGGCTAATGGGCTCCTCTTTTATACGAATTATGCATTGCATTAGGCAAATGACAGTGGGAGATGGCAGCCAGACCACACATTGTTTAGAACCTTGCAAGGTGTTTAACATCGTATCAGAAACCATCAGCTTACTTGGGCACTATGAACCTAATGAGCTTCAGAGAAATGACTTATTTGATACCATTGGTAAGCCTGGGGACGGACAACAGGGAGCAGTGCTAATGCTATCTCATTTTGCTACCTTATCAGTTCATTGTTTAAGAATGAGGTTTAACTTTATGTGGAAAGGTTGCATTTTCATGATGATGATGGCCAATCTTTGTGCTACTGAAATGTATCATTTTCTTATTGATGGTTCAAAAGCATCTAAAGTTCGTTGTGCTGATCAAGATGGTAGTTTGAAGGTAGTACTCTTTTGTACCGATTCGGATATTTTTTTTATCTCTGATTCTTGTTAGCATGTCTTTTATTTCTGTCATTTTATTTGATTCTAAGACCATATGCATGTAGGCCTCTGTTCCGAGAAAATCTTCTACAGTGATAGCATTACGGTTTCAGAACACACAGCAAGTTTATATTCAAGATAAGCTTGGCCCTGGCTTTGGTGAGGTCTGCAGGTAAGCTCCAAAAAGTTTAGGAGTAGCTCTTGGAGGTGTACAATGAAGAAGATAGTCTTAGTTGGTACTTTATATGGTAATGGTGAGGTTGATGTAGAGGAGCTTGATCTTAACAGTTCTTAGCATTTGTTGTTATTAAGTCTTAAAGTTTCTTCATACTTCTTTGAGCAGAAATTGACCTTTAGGGCAAGCATGGTTTTTCTTTTGTAGGTTGCATTGTTAATTGGTTTTTGTGTCATTGAAAATGGTACATATGCACATGAACACACTAAGGAGTGTAATTTGAAAGTACCATCTTGCTAATGCTCTAATGTACTGCTTTGTTTTTGTTAGGGATGTCTATTTTAAATCCCTGAACTTCCACAAAAGTCTAAAGTTTGTTTCTAAACTTTCAAACTGGATATTAATCACCCCTTAACTTATCAAACCATCTACTTTTGGGATTCTTCCTTCTCTTCCTCCTCATTCTTCCTGCTGAAGCAGTGAAGCAACAACTCTGGACGAATCACCGGCATGCCCCTGCCTGCGCTGGCATCGACCTCACCTGTCCTTGTGCCTCACCCACCATTGCTGCTGCCAACTCGCTTAGCTTCATCGCACATGCATTTGGCTAGGGCTTCTCTGAGGGCCGAGCTGCACACAGGAGGCTTCCTTCCGATCTGGTGGGTATCTCGTGCATGTGGAGCAAAGACCCATTTCTAAGCAGCATGAGTCAAACGATGCAATCAATTAATCAAGCTACGTGTTTAATTAATACCCATGGAATATTGCTAGTTGGCACCAGTGAGCTTGGGCAGATTTTGTGTCGCTGATGCTATTTGCTACTAGATCAATGCCTCACCCACAGCCGCCAGGCTGCGGCCTCTGCACTTGGTCAACTTTACTCGCTGCTACTTGACCACTGCCTGCCTGCCTCTGCTTCCTTGCTTGCCCTTGGCCAACATTTTTTTGTCGGGATGACCGAAGGAGGTCATCCAATGTCATTAAGATAGAGGAAAAAAAAGGTTACAAGAAGGTTTTTCATCGACAGCAAGCTATTGAGGAAGGATGTGCACAAAGCGCACGCCCCGACACCACATGCCAACTGCACAAACACAAGCTATAGAGAGGGGAGCCAAACACCGAACCGGCAACCGCTATGCGAGGCCGGTCACCGCTAGGCTTACAACAACACCACAGAACGGAAACTCAAAAAAGACAACGCCTTCATGAAGGTAGCGACATCAAAAGATGCCGTCGTTGTCCGTCCAAAAGACTGGACAAGGTTTTCAACTAGAGATCCTCGTTGAGGGAGGAGGGTACCTCGACAATGCCCCCAAGAAGGTTACCTCGCCCGAAGGCGTAGCCGCTGCCTGTAGGCTGTAGGCTGTAGGCTGTAGCTGAGGAAGAAGAGCAAAATGCAGGGATAGCGAATGACATGTAGAGTCCACTAATTTATTATTTTTCTTTGCTAACTGAGATGCCACATATTAAAACCAGTCTGGTTTTGGTTGAAATACGTAAACCAAACAGTTTGAAAAGTTCAGGGATGAAAGTGTCTGGTTTTGAAGTTGATGGACGATTTTTAGACTTGTGCAAAAATCCAGGGGTGTAAAAAAGACATTTCCCTTTTTCTTAATTTAGAAGCCCTTTTTTCCCTTCAGAAATACTAGTTTTCTGTTTTATTTTGTGTAGATCTGTTATTCTTGTCACTTTGAACTCATATTTGTTCGTCCAATATCTGAAAAGCTTATATTTAACCTATTGCAGTTCCGATAGTCTTCAGAGGTGTACATCTAGCTATGGAAGGGATAATGTTAGAACCATTCTCAAAGGACTTACAGGACGTGGGGAGGATTCTTCAGATCTATACGATTTTATTGAATGCAATCCAAGTTTGGATTATTCAAATTGGTGGACACAACGGAAGAAGTTTAAAAAGTTTAAGGACCACAAATGGATAAGAAGCAAGAGACATTCTATGAGTAGACTGAGAGCCTCAAAGGTATGGTTAAGATAAAAGTGCGCCAATGTACATCACCGCCCCTGATGTTACCCATTCAGTGGGTCTTTTGTATATAGTTCCAGTGGGTGGTTCAGCCGCTAGATCTCATGGGCGTTGGGCAGCCCAGTACCGGTGGAGGTAACATTATCCCTATCTTCCCCTCTTACTCAGTACTGTAGCTCAGTTGGTCAGAGTTTATTGGATAGGACTAGGATGGGTCCTTCCCTCTCTATATAAGGAGAGATTGTATTGTGGTTTGGATTAAGCAATGAAAATCGATTAGTCTAATCTCTACTCCCTCAATGTTCTTCTCCCTGTTCTAAATTTATATCCCTTCTCCAGTAGCTGACGCTGCCTGGATATCTTCTTGGCGGTGGTGTTTTGAATGAAGAAACATTAGATTGAAGGTGATAGTGAAACTTTGATAAGTCACAAGAATCTTATAGCATTAGAAATATCATAACTGAGATTGACTGGTTCCAGGAAGTCCACTCGAATGCGGGATATGTTAATGTTCTGTTTGTACGTGTGCATTATTTGTGTTACTTTATAATAGTAGAATCACTAGCATGTACTGTATCAAGTATCATGTCTGTTACTTTTGTATCTCGGCATATGTTCTCCAACACCCTTTGCTCCTTGAATTTTCATGTAACTTTTGTATCTTAACATATGTTCTCTAACACCCTTTACTCCTTGTTTAATTTGTTCGTACTTCCACCACCGACTATGTTTGGTCTCTCTTGTGAAACTTACATGTAGTCTGCTCGTTCTTTCTAATTTTGCGCTCAAACGTTCTGAACGTCGGCACTATTATGCTGATTTTTTTAAAAAAAAGAAAATGAATAGAAATCAAAGGTGGATACATGAAAACTGTCGAATATTTTTGTGTATATTTTATTATTTTGTAAATTTGTGTAGTCTAGTTTGCAAAATAGGATGGACGCTGTTGGTCGGGTATTCAGATGTAAATGAAGGGCAATTGAAGGGTATCCCGATGTATATCCAAAACTTTTGATAAGAAAATAGATGTATAAATAAATCGTATAATATAATATGTATGTATATATGAGAAAAGAAGAAATAAATAGGCCACATTAAACCCTAGAAACAAGAAGCCTATCGTTCTGGTCTCCTGGGCCTCACTCCCCGCTTCACTCCTCTGATGTGCTGGCCAGCCGCGTCAACCGATCAGCACAGGTACAGAGACCCGTCCCCAAGCCACGGCCGCCGCAACCACGCCACGCACCAGTCGGTGGTGGTTTGGATTGTCAGCTATACTAGTTGATACCTGTACCGGAAAAAGTATACTTTTACTCCCTCAACTATTATCCGAGTACTCTAAGTATCAAAACCAGTACAAACAATGTCCCTCGGTGGTTTTAGAGGTGGTTTTGGCCGACGTGACGCCTACGTGGCGGTCTTGACCAAGTCTTTGTTCTACGTGACGCTTACGTGGCATTAGAAAAAAAAACAAAAATAAAAGAATATGTAGGACCCATATATCATTCAAAAAAAATAATATTGTGGACCCATAACGCATGATTGCAAATGTGGCTTTTGCAGGGCATTGCCTCGGAGGCAAGGTTGGTATCTGCTACGGCCGCAAGCCCGCAACGCCGATGACCTGCCGGCGCCGGACAAGGTGGTGCAGCTCATCCAGCAGCAGTCGCTCAAGTACGCGCGCATCTACGACACCAACATCGACGTCATCAAGGCCTTCGCCAACACCGGCGTCGAGCTCATGGTCGGCGTCCCCAACTCCGACCTCCTCCCCTTCGCGCCGTTTTCAATGAGAACAAGAAACCGGGAATTGAATCTGAGAGGAACTGGGGGCTGTTCTTCCCTGACCAAAGCTCTATATACAGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008160