Os12g0580400

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0580400| Description = Amino acid/polyamine transporter I family protein| Version = NM_001073661.1 GI:115489283 GeneID:4352634| Length = 19...")
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Gene Name

Os12g0580400

Description

Amino acid/polyamine transporter I family protein

Version

NM_001073661.1 GI:115489283 GeneID:4352634

Length

1963 bp

Definition

Oryza sativa Japonica Group Os12g0580400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24241339..24243301

Sequence Coding Region

24241499..24242842

Expression

GEO Profiles:Os12g0580400

Genome Context

<gbrowseImage1> name=NC_008405:24241339..24243301 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24241339..24243301 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccggagcctgcgaggcggcgccggcgcggcggcgggggctgacggtgctccccctcgtcgcgctcatcttctacgacgtgtcggggggccccttcggcatcgaggactcggtccgcgccggcggcggcgcgctcctcccgatcctggggttcctcgtcctccccgtgctctggtccctccccgaggcgctcgtcaccgccgagctcgcctccgcgttccccaccaacgccggctacgtcgcctgggtctccgccgcgttcggccccgccgcggcgttcctcgtcgggttctccaagtgggcgtcggggacgctcgacaacgcgctctacccggtgctcttcctcgactacctccgctccggcggggggctcgtgctctccccgccggcccgctccctcgccgtgctcgcgctcaccgccgcgctcacctacctcaacttccgggggctccacctcgtcggcctctccgcgctggcgctcaccgcgttctcgctctccccgttcgtcgcgctcgccgtgctcgccgcccccaagatccgcccgtcgcggtggctcgccgtgaacgtggccgccgttgagccgcgcgcctacttcaactccatgttctggaacctcaactactgggacaaggcgagcacgcttgccggcgaggtggaggagccgaggaagacgttcccgaaggcggtgttcggcgcggtggggctcgtcgtgggcgcgtacctcatcccgctcctcgccgggacgggcgcgctgccgtcggagacggcgggggagtggacggacgggttcttctccgtggtcggcgaccggatcggcgggccggtggctgcgcgtgtggatccaggccgccgcggccatgtccaacatggggctcttcgaggccgagatgagcggcgactcgttccagctcctcggcatggcggagatgggcatgatcccggcgatcttcgcgcgcaggtcgcgccacggcacgccgacgtacagcatcctctgctcggccaccggcgtcgtcatcctctccttcatgagcttccaggagatcgtcgagttcctcaacttcctctacggcctcgggatgctcgccgtgttcgccgccttcgtcaagctccgcgtcaaggaccccgacctcccccgcccgtaccggatccccgtcggcgccgcgggcgccgccgccatgtgcgtcccgcccgtcgtcctcatcaccaccgtcatgtgcctcgcctccgccaggacgctcgtcgtcagcgccgccgtggccgtcgccggcgtcgccatgtactacggcgtcgagcacatgaaggccaccggctgcgtcgagttcttgacgccggtgccgcctga</cdnaseq>

Protein Sequence

<aaseq>MTGACEAAPARRRGLTVLPLVALIFYDVSGGPFGIEDSVRAGGG ALLPILGFLVLPVLWSLPEALVTAELASAFPTNAGYVAWVSAAFGPAAAFLVGFSKWA SGTLDNALYPVLFLDYLRSGGGLVLSPPARSLAVLALTAALTYLNFRGLHLVGLSALA LTAFSLSPFVALAVLAAPKIRPSRWLAVNVAAVEPRAYFNSMFWNLNYWDKASTLAGE VEEPRKTFPKAVFGAVGLVVGAYLIPLLAGTGALPSETAGEWTDGFFSVVGDRIGGPV AARVDPGRRGHVQHGALRGRDERRLVPAPRHGGDGHDPGDLRAQVAPRHADVQHPLLG HRRRHPLLHELPGDRRVPQLPLRPRDARRVRRLRQAPRQGPRPPPPVPDPRRRRGRRR HVRPARRPHHHRHVPRLRQDARRQRRRGRRRRRHVLRRRAHEGHRLRRVLDAGAA</aaseq>

Gene Sequence

<dnaseqindica>161..1504#acctgtcattcactcacccacccaccccccacaatatcttcccctcctcctcacccacgcccacgcgacctcgtcgaacaccttgtcgccgtcgccgtcgccgtcgcctcaccggcgccccaccaacccccaaccccccgcgcgggcggcggcggcgcctatgaccggagcctgcgaggcggcgccggcgcggcggcgggggctgacggtgctccccctcgtcgcgctcatcttctacgacgtgtcggggggccccttcggcatcgaggactcggtccgcgccggcggcggcgcgctcctcccgatcctggggttcctcgtcctccccgtgctctggtccctccccgaggcgctcgtcaccgccgagctcgcctccgcgttccccaccaacgccggctacgtcgcctgggtctccgccgcgttcggccccgccgcggcgttcctcgtcgggttctccaagtgggcgtcggggacgctcgacaacgcgctctacccggtgctcttcctcgactacctccgctccggcggggggctcgtgctctccccgccggcccgctccctcgccgtgctcgcgctcaccgccgcgctcacctacctcaacttccgggggctccacctcgtcggcctctccgcgctggcgctcaccgcgttctcgctctccccgttcgtcgcgctcgccgtgctcgccgcccccaagatccgcccgtcgcggtggctcgccgtgaacgtggccgccgttgagccgcgcgcctacttcaactccatgttctggaacctcaactactgggacaaggcgagcacgcttgccggcgaggtggaggagccgaggaagacgttcccgaaggcggtgttcggcgcggtggggctcgtcgtgggcgcgtacctcatcccgctcctcgccgggacgggcgcgctgccgtcggagacggcgggggagtggacggacgggttcttctccgtggtcggcgaccggatcggcgggccggtggctgcgcgtgtggatccaggccgccgcggccatgtccaacatggggctcttcgaggccgagatgagcggcgactcgttccagctcctcggcatggcggagatgggcatgatcccggcgatcttcgcgcgcaggtcgcgccacggcacgccgacgtacagcatcctctgctcggccaccggcgtcgtcatcctctccttcatgagcttccaggagatcgtcgagttcctcaacttcctctacggcctcgggatgctcgccgtgttcgccgccttcgtcaagctccgcgtcaaggaccccgacctcccccgcccgtaccggatccccgtcggcgccgcgggcgccgccgccatgtgcgtcccgcccgtcgtcctcatcaccaccgtcatgtgcctcgcctccgccaggacgctcgtcgtcagcgccgccgtggccgtcgccggcgtcgccatgtactacggcgtcgagcacatgaaggccaccggctgcgtcgagttcttgacgccggtgccgcctgacagcctccgtggatcatcatcatcatcatcctcatcggcagcgtccgacaacggcggcgacgacgacgtcgaggacgtctgcgccctcctcctcgccgccggcgagcacgccggagaaggcgtcagtgtcagcaaggagaattattagtgtacagtgattggaatttattacagtggcttctcttcagtttgagtaaatatctacagaaaatgcagaagaatacagtttagttttctgaactcctgatgagcttttgtcaggaaaaaaaactgttgtcttatgtgatctgaatcctgaaaacatgggagcaaatcttgcacatgtcaaagattaatttgcccccaaagtgataaatacagtttagtttattaagtacagagatattcctgtttgtgtgatgcagaattgcagagtagcagatcaatcagaaatgaattgagagacatgggttttgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0580400, RefSeq:Os12g0580400