BGIOSGA008176

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Revision as of 03:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008176| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008176, complete gene.| tag = OsI_071...")
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Gene Name

BGIOSGA008176

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008176, complete gene.

LocusTag

OsI_07152

Ensembl Transcript ID

BGIOSGA008176-TA

Ensembl Protein ID

BGIOSGA008176-PA

Length

6686

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16895901..16902586

Sequence Coding Region

16895901..16896097,16898235..16898346,16898597..16898737,16898837..16898968,16899043..16899126
,16899586..16899777,16900857..16901373,16901813..16901861,16902067..16902586

Genome Context

<gbrowseImage1> name=IndicaChromosome02:16895901..16902586 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:16895901..16902586 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTAGTGATTCACAAGTCCATTCTAGTCATTCTGATGAGTCCATCACTAGTGAGAATTTGGAAGAGATGATGTGGGAAGAAATTAATGATCCTACTGAAGCTCAGCTAGAAGCCCGGCTTGAAGCTCAACTTGAGATGAAATTGATGGCACGCCTAGTTGGGAACTCTAATCAGCGTGGAGGCTACACACGCAGTTCTTCTCTTCGGGCGGAGGCCATGACGACATTTCAGCTGGGTACCGGTTTCATCCCCAAAATACTCGCCGTCGTCAATATACATGGGAACTTCCAAGCAAAGTCCAGAACGGCACATCAATCAGCCAATTTCGATGCAATTATGACACAACTCATGCAGATTCAACAAGGTTGTCAGTTTCTGGACAACAAGATATCCACAAAACTAATCTCAATAGAGAATACTTGCATTCAAAATAGAAGAGATATTCAGGCAATAAAGTACAGGTTGGGTACAACTTCAAGGTCACGAACTTTCCGTAAATTTAAACCAGCAGCCAAACAAGAAGAGACAGTAATTGATTCCAGGGCAGATTGCCGACAAGACCTAGTTGATGATTCAAAGAACTACGATAGTCAACCAAATGGAACAGCTACTTCTCCACACATAATCGAAAGCGATGACAATAGCCAGCAAAATCCAACACAGGTCATAGATGCATACATACAAATCATCATAGACAAGCAATCCGACACTCCACGAGGACAGGGAATTGCACTCCTTGAAACTGCAACACAATGCCAGCTGTGGAAAATTAATGGTACAGACAAAGGTACATGCAACAAGAGATATCGTGATCAAAGATCCAAAGTTGCTGCCAGCTATTTAGAGCATGAAATGAAAGCAATCGAGTACGGCCTGGAACTCCTAAAGAAGGGGATTATCTGGAGAGTGGGAAATGGGGGTTCTATCCGGTTGTGGCGGGATCCCTGGATTCCCAGGAACATGTCTCGCCGGCCGATCACAATGAAAAGGAACAATAGATTAAAGTGGGTTTCTGACATCCTGAAACCGGATGGTTCTTGGGACGAGAACTTGGTTTCTGCAATCTTCCTCCCGGTGGATGTTGAAGAAATTCTAAAGATCAAGATATCCTCCCGCCAAGAGGAGGATTTTGTTGCTTGGTTTCCTGATCGGCTTGGTCGTTTTTCGGTAAGAAGTGCTTATCAGTTGGCAATGCAAATTGCTCGACTGGATGAATGCTCGTGCTCCTCGGACTACGCCATCAAGAAAGGGTGGAACCTGATCTGGTCCTGTAATGTGCCCCAAAAAGTGAAAATCTTTGGTTGGAGAGCAGCCACAAATAGCTTACCAACTATGGAAAACAAGAAGAAGAGGAATTTTGGAATTGTTGGACGCAATGTTAGGCAAGTGTGGCTTGCCACACTTTTTATGGCCTACAAATTATGGTCAAGACCAAAACCGGGATGGATGAAGCTTAATATTGATGGGTCGTATGGCCCTCAAGATGGGAGAGGAGGTATTGGTGCTGTCTTGAGAGAGAGTTTCGGAAGAGTAATCTTCTCCGCGTGTGGTTTCATTGGCAGATGCAATGGGGCCCTGGAATCAGAGCTGATTGCTTGCAGAGATGGCCTCAACCTGGCGTTGCAGTGGACCCTGCTTCCGATTGCCGTTGAATCTGATTGTCTGGAAATTATTCAGCTATTGAATTCAAAGGAGAAGCTGCTGTCAGCCGAAGGATTTATAGTCAGGGAGATTCGCTTTCTCATGACTGGAACAAAGGAAGTGTCTTTTGCCAAAGTGCATAGGAACCAAAATAGAGTTAGTCACTTTTTAGCAAATAAAGGCCGTTGTGAATCCATGATGGAATTCTGGCCAGACGATAATTGTAATATGATCTCGCACCTTGTGTGCGAGGACTCGTTTATTCGAGTAAATCCCTTGTTCCCCGCAAAAATAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MSSDSQVHSSHSDESITSENLEEMMWEEINDPTEAQLEARLEAQLEMKLMARLVGNSNQRGGYTRSSSLRAEAMTTFQLGTGFIPKILAVVNIHGNFQAKSRTAHQSANFDAIMTQLMQIQQGCQFLDNKISTKLISIENTCIQNRRDIQAIKYRLGTTSRSRTFRKFKPAAKQEETVIDSRADCRQDLVDDSKNYDSQPNGTATSPHIIESDDNSQQNPTQVIDAYIQIIIDKQSDTPRGQGIALLETATQCQLWKINGTDKGTCNKRYRDQRSKVAASYLEHEMKAIEYGLELLKKGIIWRVGNGGSIRLWRDPWIPRNMSRRPITMKRNNRLKWVSDILKPDGSWDENLVSAIFLPVDVEEILKIKISSRQEEDFVAWFPDRLGRFSVRSAYQLAMQIARLDECSCSSDYAIKKGWNLIWSCNVPQKVKIFGWRAATNSLPTMENKKKRNFGIVGRNVRQVWLATLFMAYKLWSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVIFSACGFIGRCNGALESELIACRDGLNLALQWTLLPIAVESDCLEIIQLLNSKEKLLSAEGFIVREIRFLMTGTKEVSFAKVHRNQNRVSHFLANKGRCESMMEFWPDDNCNMISHLVCEDSFIRVNPLFPAKIN</aaseq>

Gene Sequence

<dnaseqindica>1..197#2335..2446#2697..2837#2937..3068#3143..3226#3686..3877#4957..5473#5913..5961#6167..6686#ATGTCTAGTGATTCACAAGTCCATTCTAGTCATTCTGATGAGTCCATCACTAGTGAGAATTTGGAAGAGATGATGTGGGAAGAAATTAATGATCCTACTGAAGCTCAGCTAGAAGCCCGGCTTGAAGCTCAACTTGAGATGAAATTGATGGCACGCCTAGTTGGGAACTCTAATCAGCGTGGAGGCTACACACGCAGGTACATCAGTAGAGATCATGAAGACGATCACAACAGGTTATTTGCTAAATATTTTTCAGACAATCCTTTGTACACCGATGATCAATTCCGTAGGAGATTTCGCATGAGGAGGCATCTTTTTTTGCACATTGTACAAGCTCTTGGCGAGTGGTCTCCATATTTTTGTCTTAGGACAGATGCATTTGGAAAGGTGGGTCTTTCACCATTTCAAAAATGCACTGCTGCCATGCGAATGTTGGCATATGGTACTCCAGCTGATCTTATGGATGAGACTTTTGGGGTAGCTGAAAGCACAGCAATGGAGTGTATGATCAATTTTGTTCAAGGTGTGAGGCACATATTTGGTAAACAATATTTACGTAGGCCTACCGAAGAGGATATTCAACGCTTACTTCAGTTTGGAGAGGCACATGGATTTCCTGGCATGTTGGGTAGTGTTGATTGCATGCATTGGGAATGGCAAAATTGTCCGGTTGCATGGAAGGGGCAATTCACACGTGGTGATTATGGGGTACCCACTATCATGCTTGAAGCGGTTGCCTCAAAAGACTTATGGATTTGGCATGCTTTTTTTGGTGCCGCTGGTTCAAATAATGATATTAATGTGTTAGACCAATCCCCATTATTTACTGATGTCCTACGAGGAAGAGCACCTCCTGTTCAATATACTCTCAATGAGTTAGATTACAACATGGATACTATCTAGCTGATGGTATCTATCCAGAGTGGGCAACATTTGCCAAATCAATCATCAGACCACAGAGCGCTAAGCATAAATTGTGTACACAACGTCAGGAATCAGCTAGAAAAGATGTGGAAAGAGCCTTTGGGGTTCTACAAAAACGTTGGGCCATAATACGTCACCCAGCAAGAGTTTGGGAAAGAGAAGAGCTAGTAGATATAATGTATGGTTGTATTATTTTGCCCAACATGATAGTTGAGGATGAGAAAGGTTCCTATGACATACCGGATGACAACACATATGAACAAGGTCAATTCTCTGCTCAGATAACAGGACTTGACCACGGACCAATATATGGATTTGCAGAGGTACTAGAGAAAAACAGGGCTATTCGTAATCGATCTACACATCGGCGTCTCAAGGAAGATTTGATAGAGCACATCTGGCAAAAATTTGGAGGTCAACCACAACAAGATTAGGGTGTATTAACTTACTATCAACCTTATCAACCTTGTACTTTACTATTTTCATATCAACCTTGTACTGTAATATTTTCATGTCAACAGATTTGGCTCAATTACTTGTTTTTGCAATATACTTGTATTACTTTGCAATCTACCAGATTGTCTCAAAGCACTTATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCGTCGGCGGCGGGGTCTTAGGGGTCGGCGGCGGGGTCGGGACCGTCGGCGTGGTCGTCGGCGGGTGAGTCGTCGTCGGGTTCGACGGCGGGGTCGGAGGGGTCGGCGTCGACGGCGGGATCGGAGGTGTCGGCGGCGGGGTCGGCTGGCTCCTCACATGGTCGGTCAGATGGGATGAAGGTTGTGGATGGGGGAAACCCTAGAGAGTGTGCCTTTTATTGTCTATAAAATGGGCCACCTTATGGGCTTCAATAAACGGGCCACTCAATGGGCTTTTGTGACGTGATAATTAGCAATGAAATAGATTGACACAAATTTAAAGCCGCATCAACACACGTCATACATATTTGAAGCATCAACATCCCTGATACATATTTTCGATAATTTTAAATAAAAGAAATGCAATAACGACTAGGGAACCCATAAGCCAAGCCTTGAGGTCTTCTGTTTCCTTTTTTATCCTGGAAACTCTCTTCTTATGTTTTGCTTCGATTGCCGAGATCTGTGAAGCCATCTGAAATTCTAACTTCATTTTGTCTTCTTCGACTATTGTTCTGTCTACAAAATTTGACCATTGGTACTGCGCCTTGGTAGGGTTGCGTGTACTTGCATGGTCCAATGCAAGCCAGAGCATCTCAAATGCCTTTTGTATTCTTGGTTGCCATTCTTCGTCAACCCAAAACAAAGCGTCGCACTGGTCCTCTTCCTCCAGTGGGCAACCAAGAAACCTTCTTCCGGTGTCCTTCCCTTCCCATGCAGTTCTTCTCTTCGGGCGGAGGCCATGACGACATTTCAGCTGGGTACCGGTTTCATCCCCAAAATACTCGCCGTCGTCAATATACATGGGAACTTCCAAGCAAAGTCCAGAACGGTGAAACTAGCAAAAAATCAAATGAACAGAACGAGTCAACTCGAAGTAACGGCGACGCTTAAACTAATAATACTAACGCTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATCTCTCTGTTGCAGGCATCAAGTCCTGAAAATTACGAAGATCCTGAGGTAATACCCACTGTATGAAGTTTAAACTACTCACCTCAAACATTTATTAAATCTCTCTGTTGTAGGCACATCAATCAGCCAATTTCGATGCAATTATGACACAACTCATGCAGATTCAACAAGGTTGTCAGTTTCTGGACAACAAGATATCCACAAAACTAATCTCAATAGAGAATACTTGCATTCAAAATAGAAGAGATATTCAGGTACAGAACCAATTTTAACAGTTATTGTACTCATAACAAATTCAGGTACTAAGTTAATGATATTGTACTTGTACTATTTATGATTTCGAACATGCATAGGCAATAAAGTACAGGTTGGGTACAACTTCAAGGTCACGAACTTTCCGTAAATTTAAACCAGCAGCCAAACAAGAAGAGACAGTAATTGATTCCAGGGCAGATTGCCGACAAGACCTAGTTGATGATTCAAAGGTAAGGTTGCAAGCAAAATAGTATATTCCAATGAGCATTACAAATGACTAACTAATCTTGTTGCATCTTAACAGAACTACGATAGTCAACCAAATGGAACAGCTACTTCTCCACACATAATCGAAAGCGATGACAATAGCCAGCAAAATCCAACACAGGTTTTTCAAATATTAGACCTACATCTACATTACAAATGCTACACTGACCATTATGCTAATTGCTTGTACATTGCAGCAGTTATCAACAATTGGGGGAAGGCTTAGACGACCGGAGGGAAGGATTATCAAGCCCACACACAAGTCACAAACTGATTTCATCTACTACAAAAAAACATTTCCAAAGCCAGTTAATCTAGTAGGGAACCGAAACCACATGATCTAAGCCTGCTGGATGAAGTAACCTTGAGTTACATCTCTAAGAGTGAAGACAAAAAATTGCTATCAACAATTGCAGGAATCAAGATTTTTCGACAGCATCTGAAACCACTTATCCTACCAAAATAGGCTCCATCCAAAGCAAAGTGGTTGAACGGCACTGTAAGCACTGCTATCTCCTGCTTCTAATTTAACCAACAACAGAATAATTAAACACTCACAATATGCACTGCTATTGGACAGGTCATAGATGCATACATACAAATCATCATAGACAAGCAATCCGACACTCCACGAGGACAGGGAATTGCACTCCTTGAAACTGCAACACAATGCCAGCTGTGGAAAATTAATGGTACAGACAAAGGTACATGCAACAAGAGATATCGTGATCAAAGATCCAAAGTTGCTGCCAGCTATTTAGAGCATGAAATGGTAATACATACATCGTATACATTATATCCATAAGTGAAAATACATTTCTTACTCATGATTCCGCATGTAGATTTTCCTACCCTTAAATAGAAACTCGGCCCACTGGTATGTAGCTGTCCTGGATGGTGTCAATGAAAAAATCCAAATACTGGACTCACTGCATATGGATAGGACAAGCTATGATGCAGAAAAAACCCTTACCACTACGGTATAATGAAAACACATTTCATACACTTCCCTTCTGAAAGCACTACAACTAATTATATTTCTTTGCAATATAACAGATCAAAGGAATAGAGAAGTATCTTCGTTATGCCAAACAAGATGAACACAAGACTTATAAATGGAATTCTACGAACATCACGAAATGGCCAATATGCCCGCTCCTTGCCGCGTGGGGCCGGCGACGGCGTCGACGGCGGCGATTTGGCAGCACCGATAGCCCAACAACAGCGCTCTAACAACGGCCGATAGGCCCGGCAGCAGCGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCATAATCACATTGGAAAGCATAAGAAAGCAATGGATGATATATTTTGACCGTCATTCTTTTCTTTTTTATATTAACTGTTGTATCGATGGACACAAAAAACTGAAAAGTAATATGTTTAATTTGTTGTCAGCATTAATAAAAAAAAATCAAAAGCTCTGTAAGCTGTATTTTGAGATCAATATTTATCCTATACTATCTCACACTGTTATGTGGATATTCCTTTTACCTCTTTGGCACATGTGACGGTGCAAGTAATCAGAGTCGCGCAACGCGCATGTGGCTAGTGAGTGTGATGTACGTGTGTTGTGGTGTGTATGTGTATATTTTTTTTATATAATCATAACTAAACCAAAACATAGCGGTGGCTTGGGTTTTAGGGACTTCAGATTGTTCAATCAGGCACTCCTTGCACGTCAGGCTTGGAGGCTCATCGATAATCCAGATTCACTGTGTGGAAGAATTCTCAAAGCGAAGTATTATCCATGTGGTAGTCTCACTGACACTAGCTTTACGGGCAATGCTTCGCCAGGCTAGAAAGCAATCGAGTACGGCCTGGAACTCCTAAAGAAGGGGATTATCTGGAGAGTGGGAAATGGGGGTTCTATCCGGTTGTGGCGGGATCCCTGGATTCCCAGGAACATGTCTCGCCGGCCGATCACAATGAAAAGGAACAATAGATTAAAGTGGGTTTCTGACATCCTGAAACCGGATGGTTCTTGGGACGAGAACTTGGTTTCTGCAATCTTCCTCCCGGTGGATGTTGAAGAAATTCTAAAGATCAAGATATCCTCCCGCCAAGAGGAGGATTTTGTTGCTTGGTTTCCTGATCGGCTTGGTCGTTTTTCGGTAAGAAGTGCTTATCAGTTGGCAATGCAAATTGCTCGACTGGATGAATGCTCGTGCTCCTCGGACTACGCCATCAAGAAAGGGTGGAACCTGATCTGGTCCTGTAATGTGCCCCAAAAAGTGAAAATCTTTGGTTGGAGAGCAGCCACAAATAGCTTACCAACTATGGAAAACAAGAAGAAGAGGAATTTTGGAATTGTTGGACGTGTGCAGTATTTGTGGCCATGAACAGGAAGATGTGGGTCATGCGTTATACAGATGCCCTCATGCTAGGAGTATGTGGCAGTCGATGGTGAAGGAAAAGCATATCTCAAGCCTATTTTCGGCTGGCTGGGCAGGGCCAGACTAGATTTTAAACATGTTTCAGTTGGTACCGGACGATGAACAGGCCCTTGTGCTGATGATGCTTTGGCGCATCTGGTACATCCGCAACGAATTAACTCACGGAAAGCCGGCCCCTCCTCTAGAGGCCTCGACTCATTTTATCCTAAGTTATGTTCATTCCCTAGTGGAAATCAAGCAGCATCCTTTTGCAAATCTTATGAAAGGGAAGCATGTTGTAAACCTGCAGGAAGGAATGGGGAGCAGAGTTAAGGCTAACAGCATGTTTGGTTCTTAACTAACATTGCCATAACTCACTTTAGGCAATGTTAGGCAAGTGTGGCTTGCCACACTTTTTATGGCCTACAAATTGTAAGCCACACTTGTAGCAAAGTTAAGCAAAAGATTGAGTCTATGACATGTGGGGTAAGATAGTAAGAAAGTGTGGCTTGCCATAACTAAGGTAATGAACCAAACACAAGGCTAAGGAGGTGTGGCAACCTAAAGTGTGAAGTGTGGTGTGGCAAGTTGAAGCATTGAACCAAACAGCCCCTAAATGTTCAACTAACCCACCCAGATGGTCAAGACCAAAACCGGGATGGATGAAGCTTAATATTGATGGGTCGTATGGCCCTCAAGATGGGAGAGGAGGTATTGGTGCTGTCTTGAGAGAGAGTTTCGGAAGAGTAATCTTCTCCGCGTGTGGTTTCATTGGCAGATGCAATGGGGCCCTGGAATCAGAGCTGATTGCTTGCAGAGATGGCCTCAACCTGGCGTTGCAGTGGACCCTGCTTCCGATTGCCGTTGAATCTGATTGTCTGGAAATTATTCAGCTATTGAATTCAAAGGAGAAGCTGCTGTCAGCCGAAGGATTTATAGTCAGGGAGATTCGCTTTCTCATGACTGGAACAAAGGAAGTGTCTTTTGCCAAAGTGCATAGGAACCAAAATAGAGTTAGTCACTTTTTAGCAAATAAAGGCCGTTGTGAATCCATGATGGAATTCTGGCCAGACGATAATTGTAATATGATCTCGCACCTTGTGTGCGAGGACTCGTTTATTCGAGTAAATCCCTTGTTCCCCGCAAAAATAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008176

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008176&oldid=61728"