BGIOSGA008185

From RiceWiki
Revision as of 03:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008185| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008185, complete gene.| tag = OJ1371_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008185

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008185, complete gene.

LocusTag

OJ1371_D04.11

Ensembl Transcript ID

BGIOSGA008185-TA

Ensembl Protein ID

BGIOSGA008185-PA

Length

4187

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17097641..17101827

Sequence Coding Region

17097641..17097930,17098818..17098896,17099140..17099299,17099379..17099465,17100946..17101322
,17101417..17101827

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17097641..17101827 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17097641..17101827 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGCGGCGGCGGAGGAGGCGGCTGCGGCGGCGGCGGCGGAGGAGGTGGAGGGGGTGGAGGCGGGGAAGAAGGGCGTGGCGGATGCGAAGGGGAAGGGGAAGGAGAAGGTGGTGGTGGCGGAGGAGGATTCTGCGGCGGCGGCGGGCTCCGGGGGAAGCGGAGGCGGGAGGAGGACGTTGGTGGCGTACCCGGCGCGGGTTGCGGGGTACAAGGACGTGGTGGCGGACGCGGCGGTCTTCAGGAGGGCGCTCGAGGGGTTGCACGCCCAGATGGGGACAAAGCTCAAGGTGCCAATTATTGGTGGAAAAGACCTTGATCTTCATCAGCTGTTTAAGGAGGTCACTTCACGAGGTGGCATTGATAAGGTGAAATCCGATAATAGATGGAGGGAAGTAACAGCATCATTTATTTTCCCTGCTACTGCGACAAATGCTTCTTTTATGTTGAAGAAATACTACATGTCACTATTATACCATTTTGAGAGGCTATACTTGTTTGAGGCACAAGGCTGGTATCAAGAAACTGATTCCAGAAGCATTTCCTGTATAGAAATGAAAGCTGAAGGTCAAGCTTCCCGGAAAAGGAAAAGAGGAAGCAATTCTTGTTCTTCAGACCTAGCTGCTTCTTTGGATAATGATGTACAAGTGATAATTGATGGTAAGTTTGAACATGGCTACATAGTTACCGTTATCATGGGCTCAAAATCAACGAAAGCGGTACTCTATAATTGCACCGAAGAACCTGCAGTGCCAACTGCGGTGCCTCATGTTGCAATTGACAGCGCTGAGGGCATACGTCCTCGCCGCCGCCGCCGTAGGAAGAAGTTAAGTACAACAGACCCCAACCATCCTAAACCAAACAGGAGCGGCTACAATTTCTTCTTCCAAGATCAGCACAGGAAGCTCAAGCCAGAATATCCTGGACAAGACAGGCTTATCAGCAAGATGATTGGTGAACGATGGAACAATTTAGGCCCTGAAGATAAAGCAGTATATCAAGAAAAAGGTGTAGAGGACAAGGCAAGGTACCAGAGACAGTTAGCTCTTTACAGAGAACAGAGAACAGGCCAGCCAATCAGCAACGCGGTGCCTATCCAGCAGAGACTTCCTCAGAAAGAAGTGACGATTGATGAGGTGGACTCTAAAGTCAGTGAAGGTGATATCCTGCTGTCCAACCAAGGATACAGCAGCAGTACCAGTAGCAGTGATGAAACCGCTGATTCGGGAGAAAAAAATGTGGAAGATGATGAAGAGTTTAACACAGAGACATCTCCTGAGCCGAGCATGGAAACAACAGATTCTCATGGACAGCCTGATCCTTCTGCTGATGGGGAGCGCTTTGAACTGCGCCGCAGGGAGAACCCTAAGATTGATGAGAAACGTGACATGCCACCTAATTAA</cdnaseq>

Protein Sequence

<aaseq>MSAAAEEAAAAAAAEEVEGVEAGKKGVADAKGKGKEKVVVAEEDSAAAAGSGGSGGGRRTLVAYPARVAGYKDVVADAAVFRRALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFPATATNASFMLKKYYMSLLYHFERLYLFEAQGWYQETDSRSISCIEMKAEGQASRKRKRGSNSCSSDLAASLDNDVQVIIDGKFEHGYIVTVIMGSKSTKAVLYNCTEEPAVPTAVPHVAIDSAEGIRPRRRRRRKKLSTTDPNHPKPNRSGYNFFFQDQHRKLKPEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVEDKARYQRQLALYREQRTGQPISNAVPIQQRLPQKEVTIDEVDSKVSEGDILLSNQGYSSSTSSSDETADSGEKNVEDDEEFNTETSPEPSMETTDSHGQPDPSADGERFELRRRENPKIDEKRDMPPN</aaseq>

Gene Sequence

<dnaseqindica>1..290#1178..1256#1500..1659#1739..1825#3306..3682#3777..4187#ATGAGCGCGGCGGCGGAGGAGGCGGCTGCGGCGGCGGCGGCGGAGGAGGTGGAGGGGGTGGAGGCGGGGAAGAAGGGCGTGGCGGATGCGAAGGGGAAGGGGAAGGAGAAGGTGGTGGTGGCGGAGGAGGATTCTGCGGCGGCGGCGGGCTCCGGGGGAAGCGGAGGCGGGAGGAGGACGTTGGTGGCGTACCCGGCGCGGGTTGCGGGGTACAAGGACGTGGTGGCGGACGCGGCGGTCTTCAGGAGGGCGCTCGAGGGGTTGCACGCCCAGATGGGGACAAAGCTCAAGTATGGGATCCCCTCTCTCTCTCTCTCACACACACACACACACACACACGCACCAATCTGTATCTGGCATCGCCGATCCTTGCACCATGCAGCTGCATTACGATATAGCATTTGATGCCGTTGCGCGCTTAGAACAGTTGCTGTTTGTTTTGTTTCTTTCAATGCGCAAGAATTGCAACTTGGGAGATAAAGTTTGGGGAGAAAGAGAAGTTTTGGGGAGAGATAGCGAACCTAATAATAATGGACGATGCAAATACAGGCATTTATATATTTATATTTATTTATTTGGAATCCGGATACGTCCGGTTTTGACTAATCAACCCCATATAAATGTTACCCTCGAAATTATGTGGCCTATATCTGCCATTGAGTCACCGAATTTATGGATCGACCACATTTCTGGTTTCTTATCTTTTTGTTTTCCCCTTCGTTTGTGCAAATTTTGTCCACAGATTGTGATAGTTGGCTTGGGCCTTTGTTGCTGTTGCTTTGCGTAGTTATCCTTGTTTTATGCCTCGTTCAATGGTCAATTACTTATATGTTGTTAATGCTGAGGAGCAGCCCTAGTTGATGATGTTATGTTCAACACTTATGTTATTGTTCATTTGTAGTTTGTAGTTGCCTTAGACCCTAGTTTAATTGAGTGTGTGAGCCTGTCCCTTGCAAATCAATGTACTTGCTATAGCTGTATTATATGGAGAGAATGACAGGTATGTTTGTCAATGTTGCTTGAATCACTACTGTTAATATTATATATAAGTTTAAGTTGATGAATGATTTGCATTGCAACATGTTTGTGTACTGTGGTAATTAGTTGATCTACTCTACCAAGTTATCATTGAGCATGCTTCATTTTGGTGCATTTCTAACATCATTTTTGCTTTCAGGGTGCCAATTATTGGTGGAAAAGACCTTGATCTTCATCAGCTGTTTAAGGAGGTCACTTCACGAGGTGGCATTGATAAGGTGGGAATTCAATAAAATCATTCATATTTCAATTGTCAAATGTTCCTTAAGAAAGTCTTTTAGCCAGCGACAGTCATGTAAGACTGGCCATATATAGTAAAGCAAATTTTTATTATGCTTAGAAGTTTGCCAAAGAAAAGCAAACTAAAGGCATGGCACTTGAAATTTTTGTTGTTTTCATGATCTTATTATTAGTTGTTACCTGTCAGAATAGCAGGCAAATAACTGAAATTTATTTCACAGGTGAAATCCGATAATAGATGGAGGGAAGTAACAGCATCATTTATTTTCCCTGCTACTGCGACAAATGCTTCTTTTATGTTGAAGAAATACTACATGTCACTATTATACCATTTTGAGAGGCTATACTTGTTTGAGGCACAAGGCTGGTATCAAGAAACTGGTCAGTGGGATCTATAGAAATTCAGTCTTCTAGTTTGTCTGTTGCTGTATTACTAGCTCATACCATTTTGTTTCAGCAGATTCCAGAAGCATTTCCTGTATAGAAATGAAAGCTGAAGGTCAAGCTTCCCGGAAAAGGAAAAGAGGAAGCAATTCTTGTTCTTCAGGTCAGTTTCAGTTCACTTATCTTCTGTAGCAGTTTGTTTTGTTTAGGACTTCTTCTGTGGCAGGCTAGCAGCTCATTACAAGAGAAGGAAAGATTGTAAATGTTACTCAAAAGTTTAAGTAATAGTATGATTGTGTTAAGTGTTGTAACTGTCAACTTACAAGATATCGTAACATTTCTTCAGTCGAAGCTTGTGAGTTTGCAGCATTTTGTACATTTTGGCCCTTGTATTCTTATTCTACAAATAGACCCTCCAATTAACTTAGAGTGGACCCTTTGTTCAACACCATTGATGAAGGTGCCGAGGTACAACATCTTGGCGCCAACCATACACTTCGGTTCTGAGAAAGGCCAAGCTGGCATGAAGTCCACATGGTCCGCGCAGAAGGTGTTGGCGCTAATCTAATATCCAGGATGACAAGCTAACAGTTTTAATTAAACAATCGTAGAAAAATTGTGTGGTGATAAGATGTCCCCCGTGCCATGTCGGCGAGCCGAGTTTGATCCTTGGCTGGTCTAACTTGTTTTATTTTCTTTTTTAGTGGCCAAAAGGTACCATATATATTTTTTAAAAGCAAACACTCCTCGAGTCATGTATGCACGCATACAGCTGACCATTAAAATAAGAGAAATAAAAGGGAAAAACTCACAGCTTGAACTCTCGAACCCAGGATGTCGAGGAAATCATGAGGCCATCAAACCACTAGACCACTTATCAGCTTGTTACCTATTGTACCCCACAAGCCTTTTAAGCTTCCTTTATGGTCAGCGCCAAGAGGTTTGCTACTGGCCAACTGCTCACGTGTACTTCATGCCAGCGTAGCAAAGTTCTCAGCGGCAACAGTTTTTTATTATTTTCTTTTTTTTAGTGACCAACAAGCACTCCTCGATTCATGTCTGTATATGTAGAGCTGACCATTAAAAAGAGAAAGAGAGGGGGGAGGGGGGGTTAAGGTTGAACACTCGAACCCAGGACGTTGAGGAAAGCATGAGGTCGCCAAACCACTACACCACTTATCAGCTTGTTGCCTATTATATCCCACAAGCCTTTTAAGCTTCATATGTGATCAGCGCCAAGAGCTTTGGTGATGACCACCTGCTCACGTGTTCTTCGTGCAGCTTGCCAAAGTTCTCAGCGCCAATGTGTATGGCGCTTAGATATTGTACCTTGGCACCTTCATGATGGTGTTGAGCAAAGGGTCCATTCTCGAAATAAGTTTATTGGAGGGTCTATTTGCATGTATATCAATATATAAGCCCACTTATAAATTCAGTAAAAAGCGAGCATGTTCTATAATGGTGCTAAGATAAATGGAGAACATTTATAGGAAGCATTATTGCTGTTCTCAAGCATATTCTATACGGTGTTAAACTAAATGGAAAACATTTTTATGGAAATTATAATTGGTGTTCTTTTTATACATTTAGGTAAAGTTGTTTAAATTTATATGACTAACAGTTGGTTCCTTTGACTTTGTCAGACCTAGCTGCTTCTTTGGATAATGATGTACAAGTGATAATTGATGGTAAGTTTGAACATGGCTACATAGTTACCGTTATCATGGGCTCAAAATCAACGAAAGCGGTACTCTATAATTGCACCGAAGAACCTGCAGTGCCAACTGCGGTGCCTCATGTTGCAATTGACAGCGCTGAGGGCATACGTCCTCGCCGCCGCCGCCGTAGGAAGAAGTTAAGTACAACAGACCCCAACCATCCTAAACCAAACAGGAGCGGCTACAATTTCTTCTTCCAAGATCAGCACAGGAAGCTCAAGCCAGAATATCCTGGACAAGACAGGCTTATCAGCAAGATGATTGGTGAACGATGGAACAATTTAGGCCCTGAAGATAAAGCAGTAAGAGTAGACACGGTCTTTTGAATTTCATTACTTCAAATTGATAAAGTAGTCATGCAATATATGTGCTTTGTAACACTTATACATATTGTAGGTATATCAAGAAAAAGGTGTAGAGGACAAGGCAAGGTACCAGAGACAGTTAGCTCTTTACAGAGAACAGAGAACAGGCCAGCCAATCAGCAACGCGGTGCCTATCCAGCAGAGACTTCCTCAGAAAGAAGTGACGATTGATGAGGTGGACTCTAAAGTCAGTGAAGGTGATATCCTGCTGTCCAACCAAGGATACAGCAGCAGTACCAGTAGCAGTGATGAAACCGCTGATTCGGGAGAAAAAAATGTGGAAGATGATGAAGAGTTTAACACAGAGACATCTCCTGAGCCGAGCATGGAAACAACAGATTCTCATGGACAGCCTGATCCTTCTGCTGATGGGGAGCGCTTTGAACTGCGCCGCAGGGAGAACCCTAAGATTGATGAGAAACGTGACATGCCACCTAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008185