BGIOSGA008187

From RiceWiki
Revision as of 03:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008187| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008187, complete gene.| tag = P0403C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008187

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008187, complete gene.

LocusTag

P0403C01.28

Ensembl Transcript ID

BGIOSGA008187-TA

Ensembl Protein ID

BGIOSGA008187-PA

Length

2782

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17187815..17190596

Sequence Coding Region

17187815..17187909,17188180..17188326,17188419..17188469,17188571..17188739,17189012..17189240
,17190025..17190596

Genome Context

<gbrowseImage1> name=IndicaChromosome02:17187815..17190596 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:17187815..17190596 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGGAGGAGGTGGTGGAGGACGCCGCCCATGGCATCGTCATCGTCGGCGGCGGCATCTGCGGCCTCGCCACCGCTCTCGCCCTTCACCGGAAGGGGATAAGCAGCCTCGTGCTGGAGAGGTCCGAGGCGCTGCGAGCAGACGGCGTGGCCATCGGCATCCACGCCAACGGATGGCGAGCTCTGGAGCATCTTGGCGTCGCGGCGGTGCTCAGGGAGGCCACCAACGCCATCACCGCGTATCGCAGCGTGTGGCAGCTGCAGAACAAGACCACCCTGCTGCCTGCCAGGAAGGAGCTTCGGTGCTTGACAAGAAAGGATTTGGTGGAGACGCTGGCCAAGAACCTCCTGCCTGCAGGGACGATCCGCTTCGGCTGTCGCGTCGCGGCCGTCGACGAAGACTCCGGCAGCCGCTGCCCGGTTCTTACCACGGAGGATGGACACACCATCAAGGCCAAGGTGCTGATTGGCTGCGACGGCGCCAATTCGGTGGTGGCTAAATACTTGGGATTAGGGAATCCGTCGGAGCTTCCTCGTTTGGCCATTCTTGGCCTCGCCAGCTACCCGGACGGCCATCCATTTGGAACAGAGTTCCTGACCATTGCCGGCGATGATCTCGCCGTCGGACGGCTGCCCATCAACGACCATCTCGTCCATTTCTTCCTCAGCAGGCGCAGGCCTTCCACAGACATGGCACGAGACGCGAGCGCCGCGAGGGAGTACGTGCTGGAGAAGCTGCAGGAGTGCCCCGCCGACGTCGTCGACATGGTGCGGCGGTGCGACCATGCGTCATCGCTGTGGACCACGACGAAGGTGTGGTACAGGCCCCCCTGGCAGGTGGCGCTCGCCGCCTTCTTCCAGCTGAGGCGGCGCGCCGCCGTGACGGTCGCCGGCGACGCGATGCACGTCATGGGCCCGTTCATCGGCCAGGGCGGCTCCTCCGCGCTGGAGGACGCCGTCGTGCTCGCCCGCTCGCTATCGTCGTCGCGTGCCACCGTAGAAGGCGGCGCCGACGACTTGGCCGGTGACCGTGGTCGCCGGCACGATCAGCCGCAGGTCGACGGCGAGATGGGCGCGGCGATAGGGAGGTACGTGAGGGAGAGGAGGGCGAGGGTGATAAGGCTGTCGCTGGAGTCCTTCACCGTTGGGACTTTGCTAAGAACGAAGTCGGCCGTGGTAAGGCTTGTGTGCGCGGTCGTCATGGCTCTTCTAGGCACCAGGTCACGCAGGCATGCAGACTATGACTGCGGCTCTCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MEMEEVVEDAAHGIVIVGGGICGLATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLREATNAITAYRSVWQLQNKTTLLPARKELRCLTRKDLVETLAKNLLPAGTIRFGCRVAAVDEDSGSRCPVLTTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPFGTEFLTIAGDDLAVGRLPINDHLVHFFLSRRRPSTDMARDASAAREYVLEKLQECPADVVDMVRRCDHASSLWTTTKVWYRPPWQVALAAFFQLRRRAAVTVAGDAMHVMGPFIGQGGSSALEDAVVLARSLSSSRATVEGGADDLAGDRGRRHDQPQVDGEMGAAIGRYVRERRARVIRLSLESFTVGTLLRTKSAVVRLVCAVVMALLGTRSRRHADYDCGSL</aaseq>

Gene Sequence

<dnaseqindica>1..95#366..512#605..655#757..925#1198..1426#2211..2782#ATGGAGATGGAGGAGGTGGTGGAGGACGCCGCCCATGGCATCGTCATCGTCGGCGGCGGCATCTGCGGCCTCGCCACCGCTCTCGCCCTTCACCGGTACACGCACCTGTTCTCTCACTCGACCATATCTCCTCCATCGATCGACCTTACCGTGCAGACAAGTAGGAGTAGTTTTTGTGGTTTTGTCCATGCCTCTCGTCGCTATCGTCGTCGCTGTTCGTCCTAGATTGTCGACCAATTCGTGACTAGATAGCATCGAATATCCTGCTTTTCCTCGTCCTCGGGGAAAAAAGAATCTGAACTAATGCTAAGAAGAAGACGACGAGGAGGAAATGGATTAATCTCTGGTTGTGGGTTTGAGTGCAGGAAGGGGATAAGCAGCCTCGTGCTGGAGAGGTCCGAGGCGCTGCGAGCAGACGGCGTGGCCATCGGCATCCACGCCAACGGATGGCGAGCTCTGGAGCATCTTGGCGTCGCGGCGGTGCTCAGGGAGGCCACCAACGCCATCACCGCGTAACTAGAATTAATCAACCTCAGCCTTCATCAGGTTGCAATAGGATCACTGAATAATCATTTACAAATGTGAAATGTATACTGCGTTTCAGGTATCGCAGCGTGTGGCAGCTGCAGAACAAGACCACCCTGCTGCCTGCCAGGTGAAGTTTTGCGCGCGGTTTGTCAACTACTACCGAGCTAGTACCAAATGCTGGCTAAGATCATTGAGGTTTTGCCTCCATTCTGTTCGATCAAATGCTAGGAAGGAGCTTCGGTGCTTGACAAGAAAGGATTTGGTGGAGACGCTGGCCAAGAACCTCCTGCCTGCAGGGACGATCCGCTTCGGCTGTCGCGTCGCGGCCGTCGACGAAGACTCCGGCAGCCGCTGCCCGGTTCTTACCACGGAGGATGGACACACCATCAAGGCCAAGGTGATTAATTGACTAATTGCAACGTCTCTCAAGTCTCAACACATCCCTGAAATCAATTGCACAGTAATTTATGAATAAAAATTTTATATACATGTTCTTAATCTAAAAGTTAAGGCTGGAAAAATAAACTACGATAAAAAACCCCAAAATTGACTTAAATTTTCTAAATTTAAGGTTGAAAAAAATCAAATTTTAGTCGATAAGTATGAGCGAAAAGATGAAGCCGTGTCTCAATCCAAATGCATGATTAATCCTATTCCTAGTCCTAGCAGGTGCTGATTGGCTGCGACGGCGCCAATTCGGTGGTGGCTAAATACTTGGGATTAGGGAATCCGTCGGAGCTTCCTCGTTTGGCCATTCTTGGCCTCGCCAGCTACCCGGACGGCCATCCATTTGGAACAGAGTTCCTGACCATTGCCGGCGATGATCTCGCCGTCGGACGGCTGCCCATCAACGACCATCTCGTCCATTTCTTCCTCAGCAGGCGCAGGCCTTCCACAGGTACACAGACAAACGATCACTGGCTACAGTATACGTTAGCTATCTGAAAAAAGTTTCACCGTTATCTGAAAAAAAAAATCTGAAAAAGTTCAGAAATATAAGAGGAGCGACAAGGAAAACTCTTTTTATCCTTGTTTCGTTATGAAAAATTCTCAAATTATTACATATTTAATCCCATAAAGTTTTAAATTGAAACTTAACTCGCACAGAGAGAGAAAAGAAAAGGCCAAAAGACAAACCCAGCGTTTGGGGGTTGGGTGTTATAGGTGTTTTCAAGTGTTTATTGTATCTTTTGGGAAATGATCTTGAGGTGTTTGTAGGATGGCGCTTTCGGTGTAAACCATTATGTTGGGTTGATGCGCATCTCTTCTTTATCAATCAAATGAAGCATTGTTCTTCTTTTTAAAAAAACAACGTTTGAACAGTGGTCTGTTATGCATTTCAGAATATTTCCTCGGTGATAGTTGTCATTGTGTTACTTTGTTAAAAAAAATTCCATAATCATTTGCATTGCGTTTGAAAATAAAAACACAACAGAGGAGATGTCTTCTCGAGGAATTAGAATGTTTGACAAAGTGTTGATTATAAACCGTACAACTTATTAAAAAATATTTTATAAGTAAAACATTTATATATGCGTTACTAGTGATTTAAAAGCTAGAATTGAGGACTTATCCCAAAAATAAACGTTGATAAAAAGAATTGAAATTAACTTTAAAAGTCAAGTTTTAAAACTGTAGCACTAATGTTTGGGACGAACTCACAAACATGTGATGATCTCCAGACATGGCACGAGACGCGAGCGCCGCGAGGGAGTACGTGCTGGAGAAGCTGCAGGAGTGCCCCGCCGACGTCGTCGACATGGTGCGGCGGTGCGACCATGCGTCATCGCTGTGGACCACGACGAAGGTGTGGTACAGGCCCCCCTGGCAGGTGGCGCTCGCCGCCTTCTTCCAGCTGAGGCGGCGCGCCGCCGTGACGGTCGCCGGCGACGCGATGCACGTCATGGGCCCGTTCATCGGCCAGGGCGGCTCCTCCGCGCTGGAGGACGCCGTCGTGCTCGCCCGCTCGCTATCGTCGTCGCGTGCCACCGTAGAAGGCGGCGCCGACGACTTGGCCGGTGACCGTGGTCGCCGGCACGATCAGCCGCAGGTCGACGGCGAGATGGGCGCGGCGATAGGGAGGTACGTGAGGGAGAGGAGGGCGAGGGTGATAAGGCTGTCGCTGGAGTCCTTCACCGTTGGGACTTTGCTAAGAACGAAGTCGGCCGTGGTAAGGCTTGTGTGCGCGGTCGTCATGGCTCTTCTAGGCACCAGGTCACGCAGGCATGCAGACTATGACTGCGGCTCTCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008187