BGIOSGA008298

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Revision as of 03:12, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008298| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008298, complete gene.| tag = OsI_073...")
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Gene Name

BGIOSGA008298

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008298, complete gene.

LocusTag

OsI_07380

Ensembl Transcript ID

BGIOSGA008298-TA

Ensembl Protein ID

BGIOSGA008298-PA

Length

4992

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19712083..19717074

Sequence Coding Region

19712083..19712161,19712292..19712335,19712972..19713049,19713380..19713480,19713929..19714016
,19714681..19714759,19714896..19714978,19715117..19715182,19715500..19715556
,19716012..19716134,19716618..19716871,19716945..19717074

Genome Context

<gbrowseImage1> name=IndicaChromosome02:19712083..19717074 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:19712083..19717074 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGCCGGCGGGGATCGTGTGGCAGACGCCGGCGAACCCGCCGGAGCGGCAGGACTACATCTTCCGCGACGGGCGGCGCTACGTGAGGCCCTACTACTTCGAGTTCATCTCCCATGTGAAAAACAGATGGGCTGGGAAGACCATTGTTGACCTCTTCACCGATGAGTTCAAGGGCCGGCCTCGTGAATATTATGTTCATGCAGTGAAGTGTGGGAGGCTTCAGGTGGATGACCAAATGGTTCACGCAGACTATGTTGTGCAATCATCACAAAAGATAAGCCATTTCTTGCACAGGCATGAACCTCCAGTTTTGGGTGGTGATATTACAATCCTTCAAAATGAAGCTGATGTTGTTACAGTTTGCAAACCTGCATCTGTTCCAGTTCATCCGTGTGGTCAATACCGCAAGAATACTGTTGTCGGTATTCTGCAAGCTGAACATGGATTGGTGCCCCTATTTCCCGTGCATCGGCTAGATCGGTTAGTTTCAGGTCTCCTTATATTTGCTAAAAATGCTGACAAAGCTGAAAGTTTCAGGCAACAGATCGAAGCTAGTTTGCTGCAGAAAGAATATGTGGCCAAGGTTGTTGGGGTGTTTCCTGATGGTGAGCAAACTGTTAATGCAAATGTGCACTTCAACGCACGGGAAGGAAGGAGCACTGCAGAGGTTTGTGATGGTGATGGTAAAGCTCCAATTGGAAAACAAGCCTGCACCAAGTTTCAGAGGATCTGTACTGATGGAATCCACAGCATTGTCCTGTGCAAACCTGTGACTGGCCGGACTCATCAGATAAGGGTACATCTAAAACACATTGGTTACCCAATAGCCAATGACGAGGTGTACCTTTCTGAGAATTTTTCTCCACGTTCGTCAAAGGGAACAAGAATCAACAGAGCAACCACGCTAGCTTGTTCATTGCCATCTTCAGATCCTGACAGTTGTGCTGACCTTGGGAACAATGATACAAACAAAGATACAGAAGCCGATGAGGAGTTCAGCATCGATCCGATGTGTACGAATTGCCCAAATCTTGCTCCAGTAGGTTATGATGCAGATGAGGAGGCATTGTGGCTGCACTGTGTGCGATATACTGGTCCTGATTGGAGCTACGAATGCCCATATCCTGATTGGGCCTTCCTTGATAATGTGTCGAGGAAGAAGTTGAAATCATGA</cdnaseq>

Protein Sequence

<aaseq>MAAGPAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPREYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVCKPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQIEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTAEVCDGDGKAPIGKQACTKFQRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRATTLACSLPSSDPDSCADLGNNDTNKDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRYTGPDWSYECPYPDWAFLDNVSRKKLKS</aaseq>

Gene Sequence

<dnaseqindica>1..79#210..253#890..967#1298..1398#1847..1934#2599..2677#2814..2896#3035..3100#3418..3474#3930..4052#4536..4789#4863..4992#ATGGCGGCGGGGCCGGCGGGGATCGTGTGGCAGACGCCGGCGAACCCGCCGGAGCGGCAGGACTACATCTTCCGCGACGGTAGTAGCAACCCGCAGCCCGGCCTCCGTCTCGTCCCCAGCGCGCGCATCTTTCTTTCTGCCCGCCAAACCCCCTCCCCGGAGGCCCCGGACTGACGCGGTTGGTTATTCCCCCCCATTTTGCTTCGCAGGGCGGCGCTACGTGAGGCCCTACTACTTCGAGTTCATCTCCCATGTAACCAACCTCCTCGGTTTTGCCTGCATTTTATTACATATTTATGTTGGGAACATAGGTTTTTTTAGTTGCTTTGATCAGGTGATTCCTGCTTGTTATTAGTTATAATGTCTACTGAAAATTGTCGTTTCGAGAATAAATATATTGTGCACTGAAAATCTATAGAATCAGATGTTACTGGGTTTTGGCCTAACATTTTTTCTTAATCTTTTATCTGCTCCATCAAATATATTACTACTTAATTGCAAGCTGTAACTTATTGGCACCTCCAAGTTCTCCCTTTCCTCTACACCACTGCGCAATATACAAAAGCTGTCACTCTGCATTATGGGGCAATTTGGGTTATGTTTCTATTATCTCCAAGCGATCCTGTCGAGTTTTACTTCAACCAAATCCATACCCTCTAGTCTTGGAAACATGTCATTTTGGACATGGAGATGGTCTTTAAAATACACCTTTGACCATTGGTTTATATAGCCTGAAGATATTTTAATTTTATGAAAGTAGTTTTTTGAAACAATTCTATAGATATGCTTCTCATGCATCCAACCTAAATATGCAAAAAGATATTAATGTTCCAAGACGACATGTTTTCAAGATCGGAGGGAGTAGTTTATTTTTTCATTTGGTTTGCAGGTGAAAAACAGATGGGCTGGGAAGACCATTGTTGACCTCTTCACCGATGAGTTCAAGGGCCGGCCTCGTGAATATTATGTATGCCACCAGTATCTCTTTTGAATATTACCATGTGTCCTATAAGTTCCTTTTTCTTTATTATGATTTACCTTTGCATATGGAGTCATCGGGTCCTAACTGTAGAAATACACACAAAACTTGGGTTCTGAATGTGGTTCGTCCTGTTTTATGTATTCCGCCATTTAGAATTGCAAATTAATCTTATGATTCAACCCTTGCACGTTTGGAACTAGATAAGCTCTCTTGGTTCTTTGGCATTATCTACAATGATGTATCTAGAATTGATTTAAAAAAAAAACAAAATTCTGATGTATCTAGAATTGATTTAAAAAAAAAACAAAATTCTAGGTTCATGCAGTGAAGTGTGGGAGGCTTCAGGTGGATGACCAAATGGTTCACGCAGACTATGTTGTGCAATCATCACAAAAGATAAGCCATTTCTTGCACAGGTGAGTCAACTTCATCAGTTTCAAAGGTACATTGAGATGGTCATTTGACAAAAATATTACTCCCTTCATCCCAAAATATGGCTACCTTTCCACCTACTCCCTCATCTCAACCAATTACAACCATCTCTTATATAATTTCTCCACTTACTTCATCAGTTTTTGCAGTTATTACTGATACTTTGGCTTCTAAGTTAATAGTAATAGATCGGGTTTTAATTTAATGGTGATGGGAACTGTAAAATGCACAGAAAAAATAGCTTGATTGGTTCCTGAGTCAGCTCTAATGTTGTCTATAGTTTTTATTTTCCATGCTAGGTGTAGACGTTCTGCTTGCATGGTTTCGTTAGCTCTCTAACTACTGAAGCTCTTTATTCTTTGTAAAAAAAGAAAGAAACATACTTTCAACTACAATTAATTGCCAAATTCTTCATGGTTGTCACTCTGACAGGCATGAACCTCCAGTTTTGGGTGGTGATATTACAATCCTTCAAAATGAAGCTGATGTTGTTACAGTTTGCAAACCTGCATCTGTTCCAGTGAGTTCATATCATTTTGTTCAGAAACCTTCAAATACTATGTGATGTATAAAAAAGATATACATGCATGGGCCATCCTTTTTATAATATAACTGTTTTCACTTTAATTTATCCTTAATATTAAGTCTTCCGGAATTTTTTTGGTCACTTAGATCCATTAGTCAAAATATGTTACCTGAACTTTGTAAGTGTAAGGTTGTATCGACTATTCAACTATCAAGTCTAAAGTTATAGGTTCATAGCCAACATGTGCCCTGAAAGTTATATGTTAATATGTGATACGGATTGTTTGAGCTGTGCGAAACATCTGTAGAATGGAAACTGTCAAGGTACACGCATAGCTACTATAGGATTATGTGATTTTGAAGTTATTAAAACATTCTCTACCAGATGAAATTAGTACCTAAGGTTTTCCTTCTTGAATTCATAAATTTGTTGTTAAGTGTGAGATCTTATTCTGGTAGCAGTTAATCTGAACAGTTTGGTTGAATGATGTTTCTGGCCTATTAAGATCAACAACACCTTTGAGATTTCAGTAGCTTTGGAAATGCAAGTGTTAATTCCATTGTTTGTAAGGTTTAGTTATAACTTGATCTGGTTCAGCTATATTTGGCTGTAGTCGTTTATTGTTAACTACAAAAATGGAGGTGTTTTCTTTCTGTAGGTTCATCCGTGTGGTCAATACCGCAAGAATACTGTTGTCGGTATTCTGCAAGCTGAACATGGATTGGTGCCCCTATTTCGTATCCTTTGCCTCAATTGTGTCATTATTGCTGGTGCCTTTCACTATCCTGTTTATTCTCTTCCCTGTATGATTGAACTTTGACCTTTATTTATATTTGTACTCAAATTCCTTAACCACCATTATTATTTTGACAGCCGTGCATCGGCTAGATCGGTTAGTTTCAGGTCTCCTTATATTTGCTAAAAATGCTGACAAAGCTGAAAGTTTCAGGCAACAGGTGACATTGTCAATTTGAATTCACCTTTCTATTGTCCTGTTTATTCCTTGTGTCTGCTGTCTGCACTCAACTTATGTATGTTACTTCAACACTTTTATCTTTTCACACTTATTTCTTAATTGAATACTATAACTGCAGATCGAAGCTAGTTTGCTGCAGAAAGAATATGTGGCCAAGGTTGTTGGGGTGTTTCCTGATGGTGAGGTACGTCACTTATTTGGTGTCAACAGCTCAACATGTCAATAAATTTGCTGGATCCAAGAGCGGAAGATTTTGCCAATGTAAAATAACTTGAATATACTCTGCGAAGGCTTGTAGACCATTTCTTATACTGAAGTCACCCGTAGGGTTTTGTTTTTTTTCCCATGTTGTGAGAATGAAGGCTTGGATCTACCACCTAGGAAACGACTCCGTGGAATTTTCTTGTGAACTAAAAGCATTTCATTTAGTATTTGATTTCATAATTTCATACATAACTGCTGATTTCCCACAAATATCTGTCTGAAATAATTCTTTTTCAGCAAACTGTTAATGCAAATGTGCACTTCAACGCACGGGAAGGAAGGAGCACTGCAGAGGTATGTAATTAGTAATCCTGCTTGTGGTTGGTATGTTTTGTTGTGTGTGAAACTGCATATACTGAAGATATTGCCATCTCTTTCGGCAATTATTGACTGCCTCGCACCTCTCTTCTCACGCAATGTATTTGCCTGAGCAATTATAGGTTTATCCCGCATGTGATATACTGGTGCTGAGCAATTGTAGGATTGTACAGTGTAATGTGGTGTGTGCTCTTTAATGGTAACAGTGCATATGGCTATCTGTACCAAAGAAATAAGGGATAATTGATTATAATAAGCAAAAGAAATAGTTGATATGGGTCCTATAGAGTTCTTCTTGTACAAGTAGATTGAACAATGCATTCATTTATGCATGAACTATTTTCAGAAATTCGGTAGAGCAAGTGTACTCAGTAGGATATAATTCTGGTTTGAAGAACATATCTGAGTTCAATTACTGAAATGAAATGCAGGTTTGTGATGGTGATGGTAAAGCTCCAATTGGAAAACAAGCCTGCACCAAGTTTCAGAGGATCTGTACTGATGGAATCCACAGCATTGTCCTGTGCAAACCTGTGACTGGCCGGACTCATCAGGTCACACTACCTTATACACATCAACATTGATTTGCTCGTTCAAACTTCAAACAATCGAAACGACCTGGAAATTTCCCCAAAAAAATGAATCTAAAAGCCTACTACATAGAAAAAGTTCAAGTGGCCTTTAAACTTACTGCACTATCTGAATCATAATGGAAATCTTAATCCTGCTAGAGCTTGGCAAAATGCATTTTAGGTGCACACAGGTGACATGCAAACTGTTGAGTGCCTCTTTATTTAGTCATAGCTCCCTTGTCCCTGTTTTGATAACATGCTTCATGCCCAATCCGTTACTTCCAAAATAATCAAATTATCAGACATCTGTTCACCATAGCATGTCTCTGATGCAAGATGAGATAGATGTGGTCATAATTTTTCTGCTGATTCTTTGTGCCAATAGTATGCCCTCTTGTCCTATGGTTTTGTTTTTTCAGTTACTTATCTATATTTCTGATACAGCTTTTTGTTTGACAAATGTAGATAAGGGTACATCTAAAACACATTGGTTACCCAATAGCCAATGACGAGGTGTACCTTTCTGAGAATTTTTCTCCACGTTCGTCAAAGGGAACAAGAATCAACAGAGCAACCACGCTAGCTTGTTCATTGCCATCTTCAGATCCTGACAGTTGTGCTGACCTTGGGAACAATGATACAAACAAAGATACAGAAGCCGATGAGGAGTTCAGCATCGATCCGATGTGTACGAATTGCCCAAATCTTGCTCCAGTAGGGTGAGTGCTTACAGTTATCAAGTTTGTAGTTAGGAATTCTTCAGGCCTTCGTAATATTTTGTTCTTTGGGCAGTTATGATGCAGATGAGGAGGCATTGTGGCTGCACTGTGTGCGATATACTGGTCCTGATTGGAGCTACGAATGCCCATATCCTGATTGGGCCTTCCTTGATAATGTGTCGAGGAAGAAGTTGAAATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008298

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