Os12g0582900

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0582900| Description = Similar to AP2 domain containing protein RAP2.11 (Fragment)| Version = NM_001073675.1 GI:115489311 GeneID:4352648| L...")
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Gene Name

Os12g0582900

Description

Similar to AP2 domain containing protein RAP2.11 (Fragment)

Version

NM_001073675.1 GI:115489311 GeneID:4352648

Length

1427 bp

Definition

Oryza sativa Japonica Group Os12g0582900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24406470..24407896

Sequence Coding Region

24406522..24407664

Expression

GEO Profiles:Os12g0582900

Genome Context

<gbrowseImage1> name=NC_008405:24406470..24407896 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24406470..24407896 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctccatccatggcgacggcgagggtggcgtcaccgtccacggacaggaagcgcaaggccagcagcgaggacgacatagacgccgccgccgccgccgccgctctcacctcgccgctggcgccggcgagggggaggaagcggttcgtcggcgtgcggcagcggccgtcggggaggtgggtggcggagatcaaggacaccatccagaagatccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggccgcctgcctcctccgcggcgccaacacccgcaccaacttttggccccgcccctcgccgccgcccgccgccgtcgcgccaccggagacgacgacgacgccggcgctgccgtccaaggtcaccaacttgctactgctccgcctcaaggctcgcaaccagcaggtcgtcgacgccggcgccgcggcgccgcaagaagccgctctgttgcagctgcagcagcagacgccggcgtcgtgccaggaggtgttcgtccgtagccacggcgaggagtacggcttccacgtcgacgacttcctcagcgacgcgtgcagcaacgagcagtactccggcgacagctcgctgggattggacgacgacgacggcgaggtggaagacgaggaggaggaggagctcgacttccagttcatggacgtcgcgcccggggcgtcgtcggcggcggcggaggcggggctaggcggcgagggcgcgctgtgctcgccgttcgagatggtcgccgcggagctcggcggcgcggtggacgtggccgcgcacgacgcgatgaggcagatggactacgagaggaagatctccgcgtcgctctacgcgctcaccggcgtctccgagtgcctccggatccgcgccgccgccggcgccaccgccgctgcgcgggaccacctcaccggcctgagagaggcttgccggaagaagcagaaattcgccgccgccgcggcggcgccgccacagcagcaagaaccatctcctcctccacagcagcctgagacgccggcgagctcaggcggcggcatgtcggagacggcgagcggcggcggcggcgacggcgacgtgctgatgtggagctcactggacttggctccgatttgccacatggcatag</cdnaseq>

Protein Sequence

<aaseq>MPPSMATARVASPSTDRKRKASSEDDIDAAAAAAALTSPLAPAR GRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRT NFWPRPSPPPAAVAPPETTTTPALPSKVTNLLLLRLKARNQQVVDAGAAAPQEAALLQ LQQQTPASCQEVFVRSHGEEYGFHVDDFLSDACSNEQYSGDSSLGLDDDDGEVEDEEE EELDFQFMDVAPGASSAAAEAGLGGEGALCSPFEMVAAELGGAVDVAAHDAMRQMDYE RKISASLYALTGVSECLRIRAAAGATAAARDHLTGLREACRKKQKFAAAAAAPPQQQE PSPPPQQPETPASSGGGMSETASGGGGDGDVLMWSSLDLAPICHMA</aaseq>

Gene Sequence

<dnaseqindica>53..1195#ccaacctcactcactcactcaagccaagctagcaatcgatcgatcgagctcaatgcctccatccatggcgacggcgagggtggcgtcaccgtccacggacaggaagcgcaaggccagcagcgaggacgacatagacgccgccgccgccgccgccgctctcacctcgccgctggcgccggcgagggggaggaagcggttcgtcggcgtgcggcagcggccgtcggggaggtgggtggcggagatcaaggacaccatccagaagatccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggccgcctgcctcctccgcggcgccaacacccgcaccaacttttggccccgcccctcgccgccgcccgccgccgtcgcgccaccggagacgacgacgacgccggcgctgccgtccaaggtcaccaacttgctactgctccgcctcaaggctcgcaaccagcaggtcgtcgacgccggcgccgcggcgccgcaagaagccgctctgttgcagctgcagcagcagacgccggcgtcgtgccaggaggtgttcgtccgtagccacggcgaggagtacggcttccacgtcgacgacttcctcagcgacgcgtgcagcaacgagcagtactccggcgacagctcgctgggattggacgacgacgacggcgaggtggaagacgaggaggaggaggagctcgacttccagttcatggacgtcgcgcccggggcgtcgtcggcggcggcggaggcggggctaggcggcgagggcgcgctgtgctcgccgttcgagatggtcgccgcggagctcggcggcgcggtggacgtggccgcgcacgacgcgatgaggcagatggactacgagaggaagatctccgcgtcgctctacgcgctcaccggcgtctccgagtgcctccggatccgcgccgccgccggcgccaccgccgctgcgcgggaccacctcaccggcctgagagaggcttgccggaagaagcagaaattcgccgccgccgcggcggcgccgccacagcagcaagaaccatctcctcctccacagcagcctgagacgccggcgagctcaggcggcggcatgtcggagacggcgagcggcggcggcggcgacggcgacgtgctgatgtggagctcactggacttggctccgatttgccacatggcatagttattattagtagtaaacaccatacttaattagggctgtggaatttcttggtgatgacatgcatgcatggctgatggctcagacgagagctctggaaattattagctttgcttagctttgccccaattgttttgttcaacagcaaaaaataaagtttagttatcctctctgatcatctcatataaaccacaaattatagataatgaagtgtttgatgtgtttgttcatgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0582900, RefSeq:Os12g0582900