BGIOSGA008328

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Revision as of 03:13, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008328| Description = cDNA clone:J023014N14, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA008328, complete gene.| ta...")
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Gene Name

BGIOSGA008328

Description

cDNA clone:J023014N14, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA008328, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA008328-TA

Ensembl Protein ID

BGIOSGA008328-PA

Length

3574

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20429657..20433230

Sequence Coding Region

20429657..20429683,20429820..20429912,20431450..20431539,20432011..20432181,20432264..20432383
,20432987..20433057,20433155..20433230

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20429657..20433230 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20429657..20433230 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGTCTGATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTGCTCGAGAGTAGCATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGCATTCAGACAGAGAAGGAGAACAACCGAACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACAAGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTCGGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGCCGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAGTTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGGATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGCAAAGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGGAAGCGCATGCGGGATTACCCACCGTCAAGAGTCAGCTACAGCAGCGTGGAATTTCTCCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACAGTGAGAAAACACCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSASDDRKQARRKEKRKSGYPKEKLLESSMRSYQGPAKEEHSDREGEQPNSPSQNSRSSMSKSFPQVFHKKLPMGDAVYYYFKDIYDALRIAQVGVRLIFLDHDYSEFRPVVPDEECFYRSFIFSYLEQVVDRIDTLWEDRLLAALRELDRRAERFQRASEFSRRRKVFVKLIAKIKGWKRMRDYPPSRVSYSSVEFLLEFFSSYDSTNDSEKTP</aaseq>

Gene Sequence

<dnaseqindica>1..27#164..256#1794..1883#2355..2525#2608..2727#3331..3401#3499..3574#ATGTCGGCGTCTGATGATCGGAAACAGGTGATGGTTTCTGCCTCTGCGCTTGCGCCGTCATGGCATTTTGTTCGCTCGAGCGTTTCTTGTGAGTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGTTTCTCTTGTTCTTGAGCGTTTCTTGGTTTCCCTGAAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTGCTCGAGAGTAGCATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAGTTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTGGGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATGCATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGTGGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTCAGCGAAGAAATCTTGGTTGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGGCCTTATGACAGATAAAAAAAAAAAAACTAGGCACATGTTAGGGTGCCAATTCAGCTTTCTGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAAGAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGGATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTGTAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCTCAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGAATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCACTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAATTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTGTGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACTGTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTACGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGGTGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGAGGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTATGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTATCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGGACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATTCAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCAGAAGACCCATAGTTCAATTAGTAAAGAGTTGACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTTTAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATATTAATTCTCTGCGTTGCCCTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGAACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACAAGGTTTGATTCTTTTTAACCTAGATAATGTTGAAAATGGAAGTGTATCAATTATCAAATGTCAGGATATGATAGATCACATGAACTGTGTATATTCACAAGTTCATGAAGAACTAGCTGTTCAGCACAATATCTTTTTCGTATGAATACTAAATCATAAGTTAAATCTGGATTGAAGTGTTGTTTTGCAAGCAATTGGAGGAGTGGATTGTGATGTCTTTTGAATAGGCCTACTATTCTTGCTGAATTTAGGAAATATTGTGCATCTGTTCTGTCTTTTACGACTGAAGAACAAACAATCACTAAAAATAAAACGATAATTTTAATTATTTGTTTCAAGCATTTTTCAGAGAATGTAAAAACCAGAAAACTGGAGCATAAAACATAACTACATTCTAGTTTAGTTATGCTGTTTTCTGGTTCAGATCATTGATATTTGAATTCCCTTATGTGTAATTGTGTGGTGAGGTGCAGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTCGGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGCCGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGTAAATGTCCACCTCCCTGTTCCCTAGCATAGGATGTATGTTTAGTGCTATAATTCTCTTTGTTTATGACAATGTATAACAGGAGCAAGTTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGGATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGCAAAGTAATCTCTTGCCTTCCCTCTTTGTTTTCTTTCCATATATTTGTTTTTTCTGGTGTAAACATGCTTGTATTTGATGATTCTTGTAAATTTGTAGTATACAATCCAAATTGTATCTATGATCTTACTTCCTTTGTTTTATCATTTGCAGGAGATGCACACCGTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAATTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGTAAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTGTACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCTCATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTCAGGCGAGTTATGCTAGTCATGTTTGTTCATATCCAATTATTGATGATCAGCATTCTGTAAGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGATTTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGGAAGCGCATGCGGGATTACCCACCGTCAAGAGTCAGGTTTCTGAAATGTTTGGTTTTATGCAATTCCTTCATAAGTGTAGGTTCTAAATGCATCCCATCCTATCTCACTAGCTGAACCTGCACCCTTTTTCAGCTACAGCAGCGTGGAATTTCTCCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACAGTGAGAAAACACCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008328