BGIOSGA008337

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Revision as of 03:13, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008337| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008337, complete gene.| tag = P0458B0...")
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Gene Name

BGIOSGA008337

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008337, complete gene.

LocusTag

P0458B05.3

Ensembl Transcript ID

BGIOSGA008337-TA

Ensembl Protein ID

BGIOSGA008337-PA

Length

5271

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20594886..20600156

Sequence Coding Region

20594886..20595095,20595451..20595597,20595687..20595842,20595962..20596084,20596165..20596333
,20596793..20596875,20597010..20597111,20597197..20597285,20597410..20597500
,20597827..20597940,20598464..20598540,20598627..20598705,20598803..20598871
,20599115..20599290,20599402..20599458,20599553..20599643,20599737..20599835
,20599971..20600156

Genome Context

<gbrowseImage1> name=IndicaChromosome02:20594886..20600156 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:20594886..20600156 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGACGGCGAGCGGGGACCAGCCGGCGGGGGCGTCGTCGGACAAGCTGCGGCACGTGGAGTCCATGTCGGAGCTGCCCTCCGGCGCCGGCAGGATCTCCGGGATCAACGCCGTCGTCCTCGGCGAGTCACTCGCCGCCGAGGAGCACGACCTCGTCTACCCCTCCGCCGAGTTCTCCGCCGACGCCCTCGTCCCCTCCCCCAAGAAGTACCAAAAGATGTATGAGAGGTCAATCAACGACCCGGCCGGGTTCTGGTCGGAGATCGCCGACGCCTTCTACTGGAAGGAGAAGTGGAACCCCAGTGAGGTCTGCTCCGAGAACCTCGACGTCACCAAGGGGCCTGTCCAGATCAGTTGGTTCAAAGGTGGCAAAACAAACATATGTTACAATGCTGTTGATCGCAACATCGAGGCTGGGAACGGAGACAAGATCGCGATGTATTGGGAGGGCAATGAGCCTGGTCAGGATGGGAAGCTCACCTATTCAGATCTCTTGGACAGGGTTTGCCAGCTTGCCAATTACTTGAAGAGTGTTGGTGTCGGCAAGGGTGATGCTGTGATCATCTACTTACCAATGTTGCTGGAGCTTCCCATTGCCATGCTTGCTTGTGCCCGCATTGGTGCTGTTCACTCGGTTGTATTTGCTGGCTTTTCTGCGGATTCCCTGGCCCAAAGGATCGTTGATTGCAAGCCTAAGCTTGTGATCACTTGCAATGCAGTCAAAAGAGGGGTGAAGCCCATCCTTCTGAAAGATATAGTGGATGCTGGTCTGGCTGAAAGTGAGAAACAAGGAGTCGCTGTAGGTCTATGTTTGACATATGAAAATCAGTCAGCAATGAAGAGAGAAGACACAAAATGGCAAGCAGGAAGGGATGTTTGGTGGCAGGATGTTGTGACCAGTTTCCCAACCAAGTGCGATGTAGAATGGGTGGATGCAGAGGACCCATTGTTCCTTCTGTACACAAGTGGCAGTACAGGAAAGCCAAAGGGTGTGTTGCATACTACTGGGGGCTACATGGTTTACAGTGCAACAACATTTAAGTATGCATTTGATTACAAGCCGTCGGACATATACTGGTGCACTGCAGACTGTGGCTGGATTACTGGACACAGCTATGTGACGTATGGTCCACTCCTGAATGGAGCAACAGTTCTCGTTTTTGAAGGGACTCCAAATTACCCTGATTCTGGTCGGTGCTGGGACATTGTGGACAAGTACAAGGTGACAATATTTTACACTGCACCAACACTCGTTCGATCACTCATGCGTGATGGCACCGAGTATGTTACACGGCACTCTCGAAAATCTCTTCGAGTCTTGGGAAGTGTTGGTGAGCCAATTAATCCTAGCGCATGGAGATGGTTCTACAATATTGTTGGGGACTCTCGATGCCCTATCTCCGACACCTGGTGGCAGACTGAAACTGGTGGCTTCATGATCACTCCTTTACCTGGCGCCTGGCCTCAAAAACCAGGTTCTGCAACCTTTCCTTTCTTTGGTGTTCAGCCTGTCATTGTTGATGAGAAAGGGAAGGAGATTGAAGGAGAATGCAGTGGATATCTTTGCATAAAGAAATCATGGCCTGGGGCTTTCCGGACTCTCTATGGAGATCATGATAGATATGAGACCACTTACTTCAAGCCATTTGCTGGCTACTATTTTACTGGGGATGGTTGCAGCAGGGACAAAGACGGTTACCACTGGCTGACTGGAAGAGTAGATGATGTCATCAATGTCAGTGGACACCGGATTGGTACAGCAGAGGTTGAGTCTGCGTTGGTTTCACACCCAAAGTGTGCAGAGGCTGCTGTTGTTGCTGTTGAGCATGAGGTGAAAGGTCAAGGAATATATGCTTTTGTAACTTTGGTGGATGGTGTTCCTTATAGTGAAGAACTACGGAAAAGCCTCATATTGACAGTCCGCAACCAGATTGGGGCATTTGCAGCTCCTGACAAGATCCACTGGGCACCAGGACTTCCTAAAACGAGAAGCGGTAAGATAATGCGCAGGATTCTGCGCAAAATTGCCTCAAAACAGCTGGATGAACTTGGTGACACAAGCACCCTTGCTGATCCTGGCGTCGTTGACCAGCTGATTGCGCTCAAAGATTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGTASGDQPAGASSDKLRHVESMSELPSGAGRISGINAVVLGESLAAEEHDLVYPSAEFSADALVPSPKKYQKMYERSINDPAGFWSEIADAFYWKEKWNPSEVCSENLDVTKGPVQISWFKGGKTNICYNAVDRNIEAGNGDKIAMYWEGNEPGQDGKLTYSDLLDRVCQLANYLKSVGVGKGDAVIIYLPMLLELPIAMLACARIGAVHSVVFAGFSADSLAQRIVDCKPKLVITCNAVKRGVKPILLKDIVDAGLAESEKQGVAVGLCLTYENQSAMKREDTKWQAGRDVWWQDVVTSFPTKCDVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYSATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPLLNGATVLVFEGTPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGTEYVTRHSRKSLRVLGSVGEPINPSAWRWFYNIVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECSGYLCIKKSWPGAFRTLYGDHDRYETTYFKPFAGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVAVEHEVKGQGIYAFVTLVDGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASKQLDELGDTSTLADPGVVDQLIALKDC</aaseq>

Gene Sequence

<dnaseqindica>1..210#566..712#802..957#1077..1199#1280..1448#1908..1990#2125..2226#2312..2400#2525..2615#2942..3055#3579..3655#3742..3820#3918..3986#4230..4405#4517..4573#4668..4758#4852..4950#5086..5271#ATGGGGACGGCGAGCGGGGACCAGCCGGCGGGGGCGTCGTCGGACAAGCTGCGGCACGTGGAGTCCATGTCGGAGCTGCCCTCCGGCGCCGGCAGGATCTCCGGGATCAACGCCGTCGTCCTCGGCGAGTCACTCGCCGCCGAGGAGCACGACCTCGTCTACCCCTCCGCCGAGTTCTCCGCCGACGCCCTCGTCCCCTCCCCCAAGAAGGTATAAAACCCCCAACCCCAATACCCAAACCTCGCGTGTGATCCCTCTCGCTTCCCCATTGGGGACGGCCAAGATTGATTGCCATGGCGCTTGCTTTAGCTCCCGGGAGAGATCTTTCCGTTTTGGGGGGTGTCCTCTTGACACTTGGGATCGTACGTCCTGATCAAGATTGTGTGACAAAAGTCAGATAGGGACATGAATATCAATCACTATGCCAAGAGGAATCCTGAAGCTTGGATCCAATCATTTCATCCTAGTGAATTCTTTCTTTCTTTCTTTGTGTTTGGTGATTGTGATGTGCTAAAGGTTGTGATCTTGGTGTGTGTGTGTGTGTGTGTTTCATGGTGGACATCAGTACCAAAAGATGTATGAGAGGTCAATCAACGACCCGGCCGGGTTCTGGTCGGAGATCGCCGACGCCTTCTACTGGAAGGAGAAGTGGAACCCCAGTGAGGTCTGCTCCGAGAACCTCGACGTCACCAAGGGGCCTGTCCAGATCAGTGTGAGTGCGCGTTGACTAAATTTCTGCATTTCGTTGTGATGTTGATTTTAAGTGGTTCTGAATCATGTGGGTGATTCTTGGGGTTGCAGTGGTTCAAAGGTGGCAAAACAAACATATGTTACAATGCTGTTGATCGCAACATCGAGGCTGGGAACGGAGACAAGATCGCGATGTATTGGGAGGGCAATGAGCCTGGTCAGGATGGGAAGCTCACCTATTCAGATCTCTTGGACAGGGTTTGCCAGGTAAATGCACGCTCATACCTGAGAATGTATTGAACAATAGGTGTTTAACTGTCAATGTGTGTCATTGGATGTTTGTGGAAAATGCCGTAATATAATGTGTTGCGTTATCCTTTTCGTAGCTTGCCAATTACTTGAAGAGTGTTGGTGTCGGCAAGGGTGATGCTGTGATCATCTACTTACCAATGTTGCTGGAGCTTCCCATTGCCATGCTTGCTTGTGCCCGCATTGGTGCTGTTCACTCGGTAATGGCCACAGCTAAAAAGCTCTCGTGGTTATCCTGGTTAATCCTTATGATTTAATGCATACTGCAAAAATTTCTCAGGTTGTATTTGCTGGCTTTTCTGCGGATTCCCTGGCCCAAAGGATCGTTGATTGCAAGCCTAAGCTTGTGATCACTTGCAATGCAGTCAAAAGAGGGGTGAAGCCCATCCTTCTGAAAGATATAGTGGATGCTGGTCTGGCTGAAAGTGAGAAACAAGGAGTCGCTGTAGGTATGCAGTACAATCTGAATTCTGCATCCGCACAGGCAATTCTAAGCTGTTATCATTTCTTGATTTGCATAAGATGACTTATTACTTATTAGGAGAATAGGAGGTCCATTCTAAATATGTAAACCTTTATAGTGACTGAGCTGTGGGTGATACAATTTATCCAGTTTACTGAAAAATTGAACAGAACACGACTAGGGATTTGAAAAAAAAAATCACTATATTTAGTTTTTAACATAGGCGTTAGGTTTTGCAAATTAAATGAACAATAACATTATAACCATTAGTATGTAAATTTCAATATGTATCCAATATTTGCTGCATTTTGGCTGAAAGTTTATATAAATCACAAGATGTTCTTGTTGGAAATTTTCTTATCTTGTGCCATGTGGTTTATTCTGTGAGCACATGAATATAATTGCATACAATATCTTGTTTACTTACTACTACTGTGTTGGACAGGTCTATGTTTGACATATGAAAATCAGTCAGCAATGAAGAGAGAAGACACAAAATGGCAAGCAGGAAGGGATGTTTGGTGGCAGGTGTGTGAGTTTCTTCCTTCAACAGCAACCTTGTTAATACTTCTAATATACATAAGAAAATTTCAGGATAGGGATGTGTATTCTTATAACATCAATGTCAATTTTCCATCATCTCCTTGAGTCATACCTTTCAGGATGTTGTGACCAGTTTCCCAACCAAGTGCGATGTAGAATGGGTGGATGCAGAGGACCCATTGTTCCTTCTGTACACAAGTGGCAGTACAGGAAAGCCAAAGGTGCTTATGGCCTTTTAATTGCATATGGCATAGAATTATCCTATTACTGCATTACCCAGATATTAATCTCTTTGAACATATTTAGGGTGTGTTGCATACTACTGGGGGCTACATGGTTTACAGTGCAACAACATTTAAGTATGCATTTGATTACAAGCCGTCGGACATATACTGGTAAAGACAAGTTCTTTTTTTTTTTAAGGAGATGGTTATGGCATTTTCATATTTTGGGGAACTACTCCGAGAAACTTCTATTTCCTCATACAATCTTTGGCCTGTGTGTGTGTCTCAACATCAGGTGCACTGCAGACTGTGGCTGGATTACTGGACACAGCTATGTGACGTATGGTCCACTCCTGAATGGAGCAACAGTTCTCGTTTTTGAAGGGGTATATTTCTAAATACGTTCAAGTTAGTATGTTCTGAAATAATTGTGGTTTTGATATGATTGCAATGTGATGGTAAAATAATCGTGTGGTTTTGATTGTTGTTGGTCTTCATATTTATTTTGTCTGACTTTTCTTCTTGACTGACAACTCAGAACAGTCATGCCAAAATCTACTTTTATTTCCCAATCAGTGCTTGACTTCTTTCACTTGTTTTATGAATTTACTTACATGCCATTATGTTTAATTTAATAAGTTCTTTGTTAGGTATTCATTTTCATTTGCCTGTCATCCTTTGCCTGAAGTTTTCCTTTGAACCATAACTGTAGACTCCAAATTACCCTGATTCTGGTCGGTGCTGGGACATTGTGGACAAGTACAAGGTGACAATATTTTACACTGCACCAACACTCGTTCGATCACTCATGCGTGATGGCACCGAGGTACGCATGGTGATTCTGTATTGTGCTCTCTCATTTTTCCAGTACAAGATATACTTTCACAAAATCTGCAAGTGATACGAACGAGCCAATCTGGTGATTCTGGATGGCAGTATTTTAGCCCCCATCATGTCAGTTTGTCTGGACTCAAGTTGATTGACTGCAATCAACCATTGAATTTTGATATTTGATGCTGTTTGCTGAATCCCAACCTTTGCCAACCTAGTTATACTACTAACATGCAAAAAAGAATAATCTTGCTGCATGTGTACTGTGCAGTTAATCTGCATTAGTGGCACACTTACATTATAAAACACAGTGGAACTAATATTAAGTGTACAGACAGATATTTCATGCAGGCATCAGCACTACCTATTTGGTACATTATTTGACTTGCTAAGAAACTTGTGACTTACCAACTTGAAAAATCGAAACTTCTACAAGACTGAATTAATTAGCTAATTCTGAGATATTTTATCTCTGTTTGTGGGTAATCATCACTGATTTTTGTTTATATGCTTTGCAGTATGTTACACGGCACTCTCGAAAATCTCTTCGAGTCTTGGGAAGTGTTGGTGAGCCAATTAATCCTAGCGCATGGAGGTTTGTGGAGCATTTATCAAGTGCCACAGTACTATATGTATAGAGTTATAAGATATCAGTTTCATGCATGGTTGATTTCATTTCAGATGGTTCTACAATATTGTTGGGGACTCTCGATGCCCTATCTCCGACACCTGGTGGCAGACTGAAACTGGTGGCTTCATGGTAAGTAAACCTCTTTATGTTCCACATCTCTTTCCAGTTTTCTCGTGAGAGTATTAAGTAACTCTGATGATCTCCAATGTTTTGATTTTCTGTATAGATCACTCCTTTACCTGGCGCCTGGCCTCAAAAACCAGGTTCTGCAACCTTTCCTTTCTTTGGTGTTCAGGTAATAATTTATGTCTTAAATGTAAAGACACCATTATAGAATATATTCTCACTACCTTGTAATTATTGTAATTTAGAAAATACCATAATAAATTGGAAGGATTTTTAAAACAGTTATGGTGATGGCATTTTCCTGAGTTCTTCATGTTTGCAATGTGATTTTATTATGTGAGACCTTTGCGATGGGTATTTTCCATGCTGTGTTTCTTTCTAACTAACTTTGCTGTGTCTGTTTGGTATTCAGCCTGTCATTGTTGATGAGAAAGGGAAGGAGATTGAAGGAGAATGCAGTGGATATCTTTGCATAAAGAAATCATGGCCTGGGGCTTTCCGGACTCTCTATGGAGATCATGATAGATATGAGACCACTTACTTCAAGCCATTTGCTGGCTACTATTTTACTGGGGATGGTTGCAGCAGGTAGTGAAGTCTTTCCTTCAATATTATACAGGATTCAGGTGTATTTTTTTAATTGCTTTTGTACTTTTCAGTTTTCCAAACAATTTTAGCTAAATAGTATTTGCATATCAGGGACAAAGACGGTTACCACTGGCTGACTGGAAGAGTAGATGATGTCATCAATGTCAGGTAAGCTGCTTCGTTAGGTCCATGTTACTTGCTATGGTTTAGTTCAGTGTTCGGAAATTATAAAATTAAAACTTTTTGGCTTCTTAATTTGTAGTGGACACCGGATTGGTACAGCAGAGGTTGAGTCTGCGTTGGTTTCACACCCAAAGTGTGCAGAGGCTGCTGTTGTTGCTGTTGAGCATGAGGTATTGTCCACTGTTTTTCCCCCTTGCTCCAATCTCTATTGTGTTGGCTATCCTGCTACATATGATGCTTAATCAATAAATTGTCTGCTTCAGGTGAAAGGTCAAGGAATATATGCTTTTGTAACTTTGGTGGATGGTGTTCCTTATAGTGAAGAACTACGGAAAAGCCTCATATTGACAGTCCGCAACCAGGTCTGCCTTGGTCCTTTTGGATGTTCTTTCTCCATAGTGACACGTGACAATGCTTTTCATTTTTTATTAACTTTGCGCACATCATCAAAAAGCACGAAAAAAAACTTAACATGATTTTATCTTGTCTTGTGGCAGATTGGGGCATTTGCAGCTCCTGACAAGATCCACTGGGCACCAGGACTTCCTAAAACGAGAAGCGGTAAGATAATGCGCAGGATTCTGCGCAAAATTGCCTCAAAACAGCTGGATGAACTTGGTGACACAAGCACCCTTGCTGATCCTGGCGTCGTTGACCAGCTGATTGCGCTCAAAGATTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008337