Os12g0583300

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0583300| Description = Peptidase A1, pepsin family protein| Version = NM_001073677.1 GI:115489315 GeneID:4352650| Length = 1341 bp| Defini...")
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Gene Name

Os12g0583300

Description

Peptidase A1, pepsin family protein

Version

NM_001073677.1 GI:115489315 GeneID:4352650

Length

1341 bp

Definition

Oryza sativa Japonica Group Os12g0583300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24416299..24417639

Sequence Coding Region

24416299..24417639

Expression

GEO Profiles:Os12g0583300

Genome Context

<gbrowseImage1> name=NC_008405:24416299..24417639 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24416299..24417639 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgaaagctgttcgttctcgtgctcatcatgtgttcgaccaccgccctaattacttgcaccaatggcggcgccggcgacggaggcgaagggctccacatgaagctcacccacgtcgacgccaagggtaactacaccgcggaggagctcgtgcggcgcgccgtcgccgccggcaagcagcggctggccttcctggacgccgcgatggccggcggcggcgacggcggcggcgtgggcgcgcccgtccgctgggcgacgctgcagtacgtcgccgagtacctcatcggcgacccgccgcagcgcgcggaggcgctcatcgacaccggcagcgacctcgtctggacgcagtgctccacctgcctccgcaaggtgtgtgccaggcaggcgctgccgtactacaactcgtcggcgtcgagcaccttcgcgccggtgccgtgcgcggcgaggatctgcgccgccaacgacgacatcatccacttctgcgatctcgccgccggctgctcggtcatcgccggctacggcgccggcgtcgtcgccggcacgctcggcaccgaggcgttcgcgttccagtcgggaacggcggagctcgccttcgggtgcgtgaccttcacgcggatcgtccagggcgcgctccatggcgcctccggcctcatcggcctcggccgcggccgcctctcgctggtgtcgcagaccggcgccaccaagttctcctactgcctcaccccttacttccacaacaacggagccaccggccacctgttcgtcggcgcgtcggcgagcttgggcggccatggcgacgtgatgaccacgcagttcgtgaagggccccaagggctccccgttctactacctccccctcatcggcctcaccgtcggggagacgaggctgccgatcccggccacggtgttcgacctccgggaggtcgccccggggctcttctccggcggcgtcatcatcgactccggctcgccgttcacgtcgctcgtccacgacgcgtacgacgcgctggcgtccgagctggcggcgcggctgaacggcagcctcgtggcgccgccgccggacgccgacgatggcgcgctgtgcgtggcgcggcgcgacgtgggcagggtggtgccggcggtggtgttccacttccgcggcggcgcggacatggcggtgccggcggagagctactgggcgccggtggacaaggcggcggcgtgcatggcgatcgccagcgcggggccgtaccggaggcagagcgtgatcggcaactaccagcagcagaacatgcgcgtgctctacgacctcgccaatggcgacttctccttccagcctgccgactgcagcgcgctctga</cdnaseq>

Protein Sequence

<aaseq>MARKLFVLVLIMCSTTALITCTNGGAGDGGEGLHMKLTHVDAKG NYTAEELVRRAVAAGKQRLAFLDAAMAGGGDGGGVGAPVRWATLQYVAEYLIGDPPQR AEALIDTGSDLVWTQCSTCLRKVCARQALPYYNSSASSTFAPVPCAARICAANDDIIH FCDLAAGCSVIAGYGAGVVAGTLGTEAFAFQSGTAELAFGCVTFTRIVQGALHGASGL IGLGRGRLSLVSQTGATKFSYCLTPYFHNNGATGHLFVGASASLGGHGDVMTTQFVKG PKGSPFYYLPLIGLTVGETRLPIPATVFDLREVAPGLFSGGVIIDSGSPFTSLVHDAY DALASELAARLNGSLVAPPPDADDGALCVARRDVGRVVPAVVFHFRGGADMAVPAESY WAPVDKAAACMAIASAGPYRRQSVIGNYQQQNMRVLYDLANGDFSFQPADCSAL</aaseq>

Gene Sequence

<dnaseqindica>1..1341#atggcgcgaaagctgttcgttctcgtgctcatcatgtgttcgaccaccgccctaattacttgcaccaatggcggcgccggcgacggaggcgaagggctccacatgaagctcacccacgtcgacgccaagggtaactacaccgcggaggagctcgtgcggcgcgccgtcgccgccggcaagcagcggctggccttcctggacgccgcgatggccggcggcggcgacggcggcggcgtgggcgcgcccgtccgctgggcgacgctgcagtacgtcgccgagtacctcatcggcgacccgccgcagcgcgcggaggcgctcatcgacaccggcagcgacctcgtctggacgcagtgctccacctgcctccgcaaggtgtgtgccaggcaggcgctgccgtactacaactcgtcggcgtcgagcaccttcgcgccggtgccgtgcgcggcgaggatctgcgccgccaacgacgacatcatccacttctgcgatctcgccgccggctgctcggtcatcgccggctacggcgccggcgtcgtcgccggcacgctcggcaccgaggcgttcgcgttccagtcgggaacggcggagctcgccttcgggtgcgtgaccttcacgcggatcgtccagggcgcgctccatggcgcctccggcctcatcggcctcggccgcggccgcctctcgctggtgtcgcagaccggcgccaccaagttctcctactgcctcaccccttacttccacaacaacggagccaccggccacctgttcgtcggcgcgtcggcgagcttgggcggccatggcgacgtgatgaccacgcagttcgtgaagggccccaagggctccccgttctactacctccccctcatcggcctcaccgtcggggagacgaggctgccgatcccggccacggtgttcgacctccgggaggtcgccccggggctcttctccggcggcgtcatcatcgactccggctcgccgttcacgtcgctcgtccacgacgcgtacgacgcgctggcgtccgagctggcggcgcggctgaacggcagcctcgtggcgccgccgccggacgccgacgatggcgcgctgtgcgtggcgcggcgcgacgtgggcagggtggtgccggcggtggtgttccacttccgcggcggcgcggacatggcggtgccggcggagagctactgggcgccggtggacaaggcggcggcgtgcatggcgatcgccagcgcggggccgtaccggaggcagagcgtgatcggcaactaccagcagcagaacatgcgcgtgctctacgacctcgccaatggcgacttctccttccagcctgccgactgcagcgcgctctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0583300, RefSeq:Os12g0583300