Os12g0583400

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0583400| Description = Conserved hypothetical protein| Version = NM_001073678.1 GI:115489317 GeneID:4352651| Length = 2427 bp| Definition ...")
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Gene Name

Os12g0583400

Description

Conserved hypothetical protein

Version

NM_001073678.1 GI:115489317 GeneID:4352651

Length

2427 bp

Definition

Oryza sativa Japonica Group Os12g0583400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24419136..24421562

Sequence Coding Region

24419251..24419308,24419398..24419515,24420114..24420204,24420605..24420715,24420796..24420918
,24421265..24421351

Expression

GEO Profiles:Os12g0583400

Genome Context

<gbrowseImage1> name=NC_008405:24419136..24421562 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24419136..24421562 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgggcacgacggccgcgcagccgacgagcaggcggggcgggctctccacacctcgcacgaggcatggatttgggtgcggcgtcgacaagatgaatcgtctgcggttggcgattccctccgcttcaaagaatgtgagccgctgtgggaagcttgctatctgcagagcacaaagtgaagattctaaaggtgggggaggattcttgactggatttcttatagggggcgcaatcttcggaacattgggatatgtctttgctcctcagatcagcaagacgctagattctttattagatgaaaatggacaagacagtgaatctgatgaacatggccttgtaaagccacggtatggtcgatattatgatgaaggtttagagaaaacccgtcaaacactgggcgacaagataagccaactaaacttggcaattgacaaagctgcctcccggttgaagcgcgttgctggcaatgtggaaaaggaagctattaatgatgaatcagaaatcgaaatatcttcattcaacgataatgagcttgtggcggaaaacttgaacgagcaaggatttgtgcaaggtgaaacagcaacgtag</cdnaseq>

Protein Sequence

<aaseq>MLGTTAAQPTSRRGGLSTPRTRHGFGCGVDKMNRLRLAIPSASK NVSRCGKLAICRAQSEDSKGGGGFLTGFLIGGAIFGTLGYVFAPQISKTLDSLLDENG QDSESDEHGLVKPRYGRYYDEGLEKTRQTLGDKISQLNLAIDKAASRLKRVAGNVEKE AINDESEIEISSFNDNELVAENLNEQGFVQGETAT</aaseq>

Gene Sequence

<dnaseqindica>116..173#263..380#979..1069#1470..1580#1661..1783#2130..2216#agtggaatctgctcccctcaaaatcacctccccaccccccacctcctcgccgccgccgccggccaccgccgccgccgccgccggaggggggagggggacgacgacggaggcgcacatgctgggcacgacggccgcgcagccgacgagcaggcggggcgggctctccacacctcgtacgttccccccctctcgttcgtatgcttgttcataaaagctttttgcgctcgcgtttctcatccgcgcggtgggctgtcgtcgaaaggcacgaggcatggatttgggtgcggcgtcgacaagatgaatcgtctgcggttggcgattccctccgcttcaaagaatgtgagccgctgtgggaagcttgctatctgcagagcacaaaggtctttaacttctaatctatgatgtttgtattcttcaggcaaagtattttttgagtctggatgtagagctaagctactcctagttttatagtctctagatagatatagcatttcatggtagagactagagaatgaatgacaggagtgccctcttaacataataataatagtattattacctaagtggatttgcagtatagttgaattggagtcataaactcaagtgattctatatccccatgtcctatttctaatcacagttgagtcgaacaccgccacaatggaacagaattactgtgatctttatcgaagatggatatggccattggtttgatgcatcatattcttcagtagaaaatgattgctgcaactctaccattgcaagtaggctgattggttactttgtaacttttagatagtggagtctggggagctgcttcattaaatggcatattctccttcatgcacttctttggataggtcttgttacatttggacaatcttgtaatcaaatattcttctataatatgttttcagctgcatgattatagtatttgtcagaatgtcctgtgacagttgatgtgatttgcttgtacagtgaagattctaaaggtgggggaggattcttgactggatttcttatagggggcgcaatcttcggaacattgggatatgtctttgctcctcaggttttgtcaaacctttttaaaaaaattatgcgtggcatcggcacatgtgaagtagataaagaaacccctcatatcaaatgttgattcatcatgtttattttacaatacactgccttactctctagtgctgtagcgaatagccaatgtcttgttgagcaatttagaagattatgaatttctgattttaacaacctaacatatccatgctcgagttgactaggtggagtgctaagtgctaactaaaagttatgcatctgatatactattcaccgataataatgttgttcataagcaatgctttgtgttagtcttctatggtcatgctcggcgctattgttatctggtttgcaaagattgttaatttggaattggttgttaacaacatagcgttcttgagcagatcagcaagacgctagattctttattagatgaaaatggacaagacagtgaatctgatgaacatggccttgtaaagccacggtatggtcgatattatgatgaaggtttagaggtaagaaatcaaaaatatcgctggactattctacttgtaacatgctttttctggcaactaaaactatgaattggatccagaaaacccgtcaaacactgggcgacaagataagccaactaaacttggcaattgacaaagctgcctcccggttgaagcgcgttgctggcaatgtggaaaaggaagctattaatgatgaatcagaagtagagacttcttagaacttgtaccttttcaggagttctgtttgctgagtaacaaatctttttgtaaattattcgtttcctttacactgtatgtatatgttaatacacaaacccttcatatgcataatttcacagacttgcatagtatattctagattattgccacaaaaatttgctcccaagattcaactatacaaatttgttgtgactgctattttctttaagcctccgtatgtgaaattaatgactactaatttttcttgagtctccatatgttaactatattaccatcaatttttctaaagcttccctatgtgaactgattgagtattcactgaatttgcagatcgaaatatcttcattcaacgataatgagcttgtggcggaaaacttgaacgagcaaggatttgtgcaaggtgaaacagcaacgtagtgtatgtttaaaacaggcagcagagcagccgagtaaagccatcagcgcctttggaacagtaagtagactgcagaatcccaaattgaaaaaatgttgtagccaatccatttatattgtggctaattttggggacattttttctgcaaacatgtagctgaactggatggcctgtccaaccgattggcagcatgaaatgaatgaaacattttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0583400, RefSeq:Os12g0583400