BGIOSGA008359

From RiceWiki
Revision as of 03:13, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008359| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008359, complete gene.| tag = B1136H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008359

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008359, complete gene.

LocusTag

B1136H02.2

Ensembl Transcript ID

BGIOSGA008359-TA

Ensembl Protein ID

BGIOSGA008359-PA

Length

2346

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21193716..21196061

Sequence Coding Region

21193716..21193794,21194331..21194536,21194959..21195065,21195158..21195260,21195666..21195848
,21195939..21196061

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21193716..21196061 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21193716..21196061 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGACTGCTAAGAAAAGTGCAATCTTTGTTGCACTGCTGTGCACTCACATTCTTGTGAACCATGCATGTGACAGTGATGTGGTATTTGGGTACAGTGGGAGTACTGGTCCAGAGCATTGGGGGAGCTTAAGTCCTAATTTCACAACGTGCTCAAAAGGGACGTACCAGTCCCCAATCAACATTTTGAAAGATGACGCAGTTTACAACCCAAAGTTGGAGCCCCTTGAAATGGATTATACTGCTGCAAACACTACCATTGTTGACAATGTCTTCAATATTGCGCTACGTTACAACGACACTGCTGGGACTGTGAAGGTGGATGGGAAAAAGTATAAACTGAGGCAATTGCATTGGCACTCTCCCTCAGAGCACACCATCAATGGCCAAAGGTTTGCAGTGGAGCTCCACATGGTTCACCATTCTGATGATGGCAACATTACTGTCATTGCAGTCCTTTATCGACATGGGAAACCTGATCCATTTCTTTTTCAGATAAAGGATAAGTTGGCTGCATTATACTTAGAGGGCTGTAAAGCGGAGAAAGGCGAACCTCTTCCTGTTGGACTCGTGGATATGAGGGAATTGAAGAAAGGCGCGGATAGGTATTTCAGATACGTTGGATCCCTCACGACACCTCCATGCACCGAAAATGTTATCTGGAACATTTTTGGAGAGATAAGAGAAATGACCAAAGAGCAGGCTGCTGCTTTGAGGGCCCCTTTGCACGGGAGTTACAGGCACAACCGCAGGCCGACACAGCCACTCAATGGTCGCACCGTGCAGCTCAATTACATGTAA</cdnaseq>

Protein Sequence

<aaseq>MGTAKKSAIFVALLCTHILVNHACDSDVVFGYSGSTGPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAANTTIVDNVFNIALRYNDTAGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKPDPFLFQIKDKLAALYLEGCKAEKGEPLPVGLVDMRELKKGADRYFRYVGSLTTPPCTENVIWNIFGEIREMTKEQAAALRAPLHGSYRHNRRPTQPLNGRTVQLNYM</aaseq>

Gene Sequence

<dnaseqindica>1..79#616..821#1244..1350#1443..1545#1951..2133#2224..2346#ATGGGGACTGCTAAGAAAAGTGCAATCTTTGTTGCACTGCTGTGCACTCACATTCTTGTGAACCATGCATGTGACAGTGGTAAGAATTCTGTTTATCCTTCTTTTGCATTTTTCCTCAGCTAGTCTATTGTTTTGTTGTTTAGTTTATCTTATGATGTGTGATTTGTTGACCATCCATGTGACAATGGCACAGATTTTTGCTCTCCCGAGGACTACAACAGAACAACTTTGTCCCTCAAACTTATTTTTTTCTTATTTTTTTATAGTTTTTCAGCTTGTGGCGACCTTTTCTTTACTCGGACTAGAGATGCATTTACCCCTTTACCTCTCAGTTCTTCCTTTGATTCTTTAATAACTACAATTTTGATATTTATATTGAATGGAAGAAAGTCAAGATAAAAAAGTCACAAAATCTCATAAAAATGGAAAAACAATTCAAATTCCTCAGTCATACCAAATATTATAATCATTGTAGAATATCAGATATCAAACTGGATGATCCAAAGATAATAAAACTCAGTGGAAACTGGATGGATCATTGTTACGAGTAATTTTCCTGAAACACCTTATTTCTGATATCTCATATCTGATCTGTATTGCCTTTACCTGAAGCAGATGTGGTATTTGGGTACAGTGGGAGTACTGGTCCAGAGCATTGGGGGAGCTTAAGTCCTAATTTCACAACGTGCTCAAAAGGGACGTACCAGTCCCCAATCAACATTTTGAAAGATGACGCAGTTTACAACCCAAAGTTGGAGCCCCTTGAAATGGATTATACTGCTGCAAACACTACCATTGTTGACAATGTCTTCAATATTGCGGTTTGATCTAAAACAGATGGTTATTTGTGTTAACAAAGAAAATGTGTAGATGCAAGAATAATACTCCTAGTCAATTCTTTCTAGGAGAATATATGATTGTTTTAATATGCTGTCAATGACTTACTCATTCATTCTTTGAATTATCCATTCATGCTGTTCTTTCTGCCACTAGTGCATATGGATTAATACTCTTTGAATTAATACTCTGTTCATTCTTTGAATTAATAGTCTTATCCATTCATGCTGCTGTTTCCGCTACTAGTGCATATGGATTTGATCTCCAATCTATTATAACTATAATAATAAATTTACTACAAAATGGAAATATGCTTTGTCCAACTTTGTCTACGCCATCACCTATTCAAGTAGAGGGTATGTAAATTCAAAATCATCTGGGTTTAAATTGTGGTTGATTGATGTAGCTACGTTACAACGACACTGCTGGGACTGTGAAGGTGGATGGGAAAAAGTATAAACTGAGGCAATTGCATTGGCACTCTCCCTCAGAGCACACCATCAATGGCCAAAGGTATCCATGCACAATGCTGCATACAACCTGGTGCATTGTGAATCATGGTTATCTGTTATTCTAATTGTGTGGACCATGTCATATCATGATAGGTTTGCAGTGGAGCTCCACATGGTTCACCATTCTGATGATGGCAACATTACTGTCATTGCAGTCCTTTATCGACATGGGAAACCTGATCCATTTCTTTTTCAGGTGAATTTTTGTGATACCCTGATAGGACATAGTACTCGCTATAATGATCAAAACACTGTACTCTGTAGGACTCTAAAAATCAGATCCCCCACTTCAATCAACTAAAGTCCTTTTCCATTTTAAGTTTTAACCTTTTTTTTTTGGCATAGATCAGATTAGCAGGCTGTCCTCAGTACTGACTAGATATTGTATCCTTCAGACATAGGAGTAGGCTTGAGAACAATAACCTGCTCACAGCTGGAATTGATGCCATTAAAATGTGTACTATCTATGAAGCAGATCAACACTGTCGCCTGGCGTTTTTTTTTTTGACATCATTGGATTACCTTTCTCATATACTACACCTCATAATCAGCATATGCATACTTTAGCTATTTGCTATGTTGGTGTCTTGGTGACATGCAGATAAAGGATAAGTTGGCTGCATTATACTTAGAGGGCTGTAAAGCGGAGAAAGGCGAACCTCTTCCTGTTGGACTCGTGGATATGAGGGAATTGAAGAAAGGCGCGGATAGGTATTTCAGATACGTTGGATCCCTCACGACACCTCCATGCACCGAAAATGTTATCTGGAACATTTTTGGAGAGGTACTATTCCCCTTGCAGAGTAATAGAAACATCATGAAAACTTCGTAGTGAGTTATGTTTTTATACTCACTGACGCTTCTAATTTTGCAGATAAGAGAAATGACCAAAGAGCAGGCTGCTGCTTTGAGGGCCCCTTTGCACGGGAGTTACAGGCACAACCGCAGGCCGACACAGCCACTCAATGGTCGCACCGTGCAGCTCAATTACATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008359