BGIOSGA008378

From RiceWiki
Revision as of 03:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008378| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008378, complete gene.| tag = OsI_075...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008378

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008378, complete gene.

LocusTag

OsI_07562

Ensembl Transcript ID

BGIOSGA008378-TA

Ensembl Protein ID

BGIOSGA008378-PA

Length

2982

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21632498..21635479

Sequence Coding Region

21632498..21632586,21632760..21632961,21633046..21633227,21633372..21633859,21633940..21634151
,21634307..21634765,21635297..21635479

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21632498..21635479 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21632498..21635479 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGAGGCAAAAGGGAGGCAGAAGCAGGCAGAGACGCAAGTAGCGAAGGAAGAACTATTGGTAGCAAGATCGCCAGTGATCAGTGGGAGAAGAAGGGGAAGATCATTGCTGAGGTTGATGAACTTGGTTATATCGAAGCCCTCGATACCGATGGCACTGGAGATGATTCTGAGAAAGATGATGTTAACGTAGATGAGATATTAAAGGAGATGAGAAGAGAACAAGAGGACCCGCTTTTACATTGCGAAGGAGATACAGATGTTGAAGACCTATTTGTTAGGCCCGAGTGTAAACCAAGGAAGAAGAAATCTAGTGTTGTTGGTAATGATGCAACCCCTAATAGTGATCAACACACTTTGTATGATGTTGGTGTCGAACTGTGCTCCAATGAAGATGATGGTGCTGAAGTGTCTGCTGCACCAAAAAGGAGGAGGAAGAGGCCAGAACGGCTTGCAGTTGCAAGAATATGGGTGAAAGTTGTTTGCATTGATGAAAGATGTCCATTCTCAATGCTTGCATCGAAGATAGCCGGGGAGAGTACTGTGCAAATTAGAGAGATGGTTGAACCACACAGATGTGGAACCATTAGGAACAACACAAGAGTTACTAGCACATGGCTCAGTGAGGTTTATTCAGAGGACATAAGGAGTGATCCGGACTGGAAAGTGAATGCATTGATGGACCAAGCAATGAGAGAGTATGGGGCTGATGTTAGTAAGATTAAGGCTTACAGGGCAAGGAGCAAAGCATATGAGAAAGTCCTTGGGAACCACAAAAAACAATATTTAAGAATCAGAGATTACCTACAGACTGTGATTAACACAAATTTAGGTAGCAGATGTGTGGTGACAACACAACAAAATCCAAAGCCCGGTGTAAATCCAAGGTTTTGTGGACTTTTCATATGTTTGAATGCTCAAATTGAGGGTTTTAGGCATGGATGCAGGCCTTTTATTGGAGTGGATGGCTGTTTCGTGAAGCTCACAAATGGAGCACAAGTTCTTGCTTCCAGTGCAAGAGATGGAAACAATAATTTGTTTCCACTAGCTTTTGGGGTGGTTGGTAAAGAGGATGCACATAATTGGACATGGTTCTTGAATCAGCTCAATTATGCACTCGACGATAATGGAGATAGTGCCGGATGGACTATAATGTCAGACAGGCAAAAGGTACTGCAAGAGACATTTGTATCAAAATTTTGCACAGCTGGATATAAGGGTGGAGATTTAAAGGTGCTAATGGATCAAGCTGTATATGTTTACACTAAATCAGATTTCAACATCGCTATGGAAGACCTGAAAAATGAAAATGAGATTGCATGGGATTGGTTGAATAAAATACCTCACAAGCATTGGGCTAGGCATGCTTTTGACACTAGGTGCAAAACTGATTTGGCCGTTAACAATTTAAGTGAGGTATTCAACAACTATATTATTGATTCTAGAGACAAGCCAATTGTGACCATGCTTGAGATGATTAGAACCAAGCTGATGGAGAAATGCAATGACAAAAGAGGAGTGGTTGCAGCACAATGGGAGATAACCCCACACTATGTAGAGAAGTTGGAGCTAGAGAAGACAAATTCAAGGTACTATAGGCCTGTGTGTGCTGGAAAGGGTATTTGGCAAACTAATAAAGTTATACCTGAGGAATCAAGCTTTAGTCCAGAGGTGACATTTGCAGGCACACTTCTACATGGCAATCACTTAGCTGATCATTCAATGGCGCGAGGAGCTAAGGGGGAGGACGTGCAAGGGGACGAGGACGTGCAAGGGGAGGAGGAGGTGCACGGGGAAGAGGATGTGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MERGKREAEAGRDASSEGRTIGSKIASDQWEKKGKIIAEVDELGYIEALDTDGTGDDSEKDDVNVDEILKEMRREQEDPLLHCEGDTDVEDLFVRPECKPRKKKSSVVGNDATPNSDQHTLYDVGVELCSNEDDGAEVSAAPKRRRKRPERLAVARIWVKVVCIDERCPFSMLASKIAGESTVQIREMVEPHRCGTIRNNTRVTSTWLSEVYSEDIRSDPDWKVNALMDQAMREYGADVSKIKAYRARSKAYEKVLGNHKKQYLRIRDYLQTVINTNLGSRCVVTTQQNPKPGVNPRFCGLFICLNAQIEGFRHGCRPFIGVDGCFVKLTNGAQVLASSARDGNNNLFPLAFGVVGKEDAHNWTWFLNQLNYALDDNGDSAGWTIMSDRQKVLQETFVSKFCTAGYKGGDLKVLMDQAVYVYTKSDFNIAMEDLKNENEIAWDWLNKIPHKHWARHAFDTRCKTDLAVNNLSEVFNNYIIDSRDKPIVTMLEMIRTKLMEKCNDKRGVVAAQWEITPHYVEKLELEKTNSRYYRPVCAGKGIWQTNKVIPEESSFSPEVTFAGTLLHGNHLADHSMARGAKGEDVQGDEDVQGEEEVHGEEDVQ</aaseq>

Gene Sequence

<dnaseqindica>1..89#263..464#549..730#875..1362#1443..1654#1810..2268#2800..2982#ATGGAGAGAGGCAAAAGGGAGGCAGAAGCAGGCAGAGACGCAAGTAGCGAAGGAAGAACTATTGGTAGCAAGATCGCCAGTGATCAGTGGTAAGTAATGAAGTTAAACCCATAGGGATGGTTGATTAGATTGGATTAGAGTCGATTTTGATTAGGGTTGATGGAATTGGGATTCCTGTGTTCTGTATTTTGGAATAGTATGTGTAGTTGCAGTTTATTTTCATAGTGGATTCTTGACTGAAGGTTATTTAATTTCTTGGTAGGGAGAAGAAGGGGAAGATCATTGCTGAGGTTGATGAACTTGGTTATATCGAAGCCCTCGATACCGATGGCACTGGAGATGATTCTGAGAAAGATGATGTTAACGTAGATGAGATATTAAAGGAGATGAGAAGAGAACAAGAGGACCCGCTTTTACATTGCGAAGGAGATACAGATGTTGAAGACCTATTTGTTAGGCCCGAGGTAACAATAAGATGCATACATGATAATTTTGGGGCAGGTTCAAGTTATTTGCTAAACACACAGAATTTTGTTGGCCCATCAAAGTGTAAACCAAGGAAGAAGAAATCTAGTGTTGTTGGTAATGATGCAACCCCTAATAGTGATCAACACACTTTGTATGATGTTGGTGTCGAACTGTGCTCCAATGAAGATGATGGTGCTGAAGTGTCTGCTGCACCAAAAAGGAGGAGGAAGAGGCCAGAACGGCTTGCAGTTGCAAGAATATGGTTTGATGAGTCCAAGATTTTAGATCAAAGTCAACTATGCAAAGCTATGTGTTTTCAGAATGTGACGTAGTTTAGAAAGGCATTGAAAAGCTACCATATTGTGCAAAATAGAGACTACAGGTACTTAAGGAATGATCCTGACAGGGTGAAAGTTGTTTGCATTGATGAAAGATGTCCATTCTCAATGCTTGCATCGAAGATAGCCGGGGAGAGTACTGTGCAAATTAGAGAGATGGTTGAACCACACAGATGTGGAACCATTAGGAACAACACAAGAGTTACTAGCACATGGCTCAGTGAGGTTTATTCAGAGGACATAAGGAGTGATCCGGACTGGAAAGTGAATGCATTGATGGACCAAGCAATGAGAGAGTATGGGGCTGATGTTAGTAAGATTAAGGCTTACAGGGCAAGGAGCAAAGCATATGAGAAAGTCCTTGGGAACCACAAAAAACAATATTTAAGAATCAGAGATTACCTACAGACTGTGATTAACACAAATTTAGGTAGCAGATGTGTGGTGACAACACAACAAAATCCAAAGCCCGGTGTAAATCCAAGGTTTTGTGGACTTTTCATATGTTTGAATGCTCAAATTGAGGGTTTTAGGCATGGATGCAGGCCTTTTATTGGTAAGTTTGATTATTTAACTTTACATAATATGTGTGGTTTTGTACTTATATGTATGTTGACTATAGCAATAATTTTGTAGGAGTGGATGGCTGTTTCGTGAAGCTCACAAATGGAGCACAAGTTCTTGCTTCCAGTGCAAGAGATGGAAACAATAATTTGTTTCCACTAGCTTTTGGGGTGGTTGGTAAAGAGGATGCACATAATTGGACATGGTTCTTGAATCAGCTCAATTATGCACTCGACGATAATGGAGATAGTGCCGGATGGACTATAATGTCAGACAGGCAAAAGGTATTGCACTAAATCACCTTGATAGTCATGTCTTAAGAAAGTACTTATGTACTGCACTTATTTTTTACTCAAACCAAATATTTCATAGTGTAAATCCAAAACTTGCAGGGGCTATTGCATGCCATCAAAGCAGTTTTTCCTGATTGTGCCCAGAGGTACTGCAAGAGACATTTGTATCAAAATTTTGCACAGCTGGATATAAGGGTGGAGATTTAAAGGTGCTAATGGATCAAGCTGTATATGTTTACACTAAATCAGATTTCAACATCGCTATGGAAGACCTGAAAAATGAAAATGAGATTGCATGGGATTGGTTGAATAAAATACCTCACAAGCATTGGGCTAGGCATGCTTTTGACACTAGGTGCAAAACTGATTTGGCCGTTAACAATTTAAGTGAGGTATTCAACAACTATATTATTGATTCTAGAGACAAGCCAATTGTGACCATGCTTGAGATGATTAGAACCAAGCTGATGGAGAAATGCAATGACAAAAGAGGAGTGGTTGCAGCACAATGGGAGATAACCCCACACTATGTAGAGAAGTTGGAGCTAGAGAAGACAAATTCAAGGTACTATAGGCCTGTGTGTGCTGGAAAGGGTATTTGGCAAGTGAGTTGTAGGGAGTATACTTATGCAGTCAACCTAGAAAACAGAACATGTGGTTGCTTTAAGTGGGATGTGAGTGGCATTCCATGTAAACATGATGTTTCAGCTATATACAAGCTCAGACAGTATCCAGAAGATTATGTAAATGATTTTTTCAGGAAGGCAGCTTATGAACAAACCTACCAACACGTCATATACCATGTGCCAGGCGAACATGATTGGGTCAGAACTACAACACCTGACATAGATCCTACAAAAGTTCGAAAAGCACCCGGGTAGGCCAAAGAAAAGTAGAAGAAAATCAGCAGGTGAGGAAACACATCATAGTGGAAGGGTAAGAATGACAACTATCACTTGCTCAAACTGCAAAAATCATGGGCACAAGTACACTAGTTGTCCACTACCATTGAGGCCTGATTTGAAAATAAGAAAGAGAAAGCACAAGGTAAGATTGTTAAGTGATAATGTTTTTGTAAGTTGTGGCACAAATATATGGATCCTATATACAACTGACTTGGTTGTTTTATAATGTAGACTAATAAAGTTATACCTGAGGAATCAAGCTTTAGTCCAGAGGTGACATTTGCAGGCACACTTCTACATGGCAATCACTTAGCTGATCATTCAATGGCGCGAGGAGCTAAGGGGGAGGACGTGCAAGGGGACGAGGACGTGCAAGGGGAGGAGGAGGTGCACGGGGAAGAGGATGTGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008378