BGIOSGA008379

From RiceWiki
Revision as of 03:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008379| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008379, complete gene.| tag = OsI_075...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008379

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008379, complete gene.

LocusTag

OsI_07563

Ensembl Transcript ID

BGIOSGA008379-TA

Ensembl Protein ID

BGIOSGA008379-PA

Length

3889

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21636935..21640823

Sequence Coding Region

21636935..21637618,21638139..21638171,21638346..21638414,21638778..21638865,21638950..21639416
,21639494..21639760,21639841..21640190,21640304..21640823

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21636935..21640823 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21636935..21640823 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGAGGGCGTCGACGTCGCCGTCGCCGCAGCGGCCTGCGTCGATGGGTAGAGGCGGAGGAGGCGGAGGAGGAGGAGGGGACGCGAGCGCGGCGCTGTCGTTCATCTACAGGGGGTGGAGGGAGGTGCGGGACTCGGCGAGCGCGGACCTGCGGCTGATGCGGGCGCGGGCGGACTCGCTGCGCACGCTCGCCGACCGGGAGCTGGAGCACCTCCTGGTGTCGGCGTCCACCACGGTGGCGGCGCCCGCGCCGCCCGTCGCGGCGGGGGCGCCCATCGCGGAGGTGGAGTTCGTGCGCAACCGGATCCAGCCCAAGATCTCCGAGCTGCGGCGCCAGTACGCCGCGTCCGGGGACTGGGAGCTCGGCCTCGGCAGGAGGGTGCTCGAGGGCTGGGTGGCGCCTCCGCCGCCCAGGGGCGCCACCACCGCCCGCGTCGACCTCTCCGGGATCACCGCCATACGCAACGCCCTCGTCCCTGAGGTCGCCGGCGGCGGCGGGGCGAGCACCGCCTGGTGGAGCGGGGATGAGATGGAGGAGGAGGAGGAGAAGGAGTGGGAGGTGGTGAGGATGATTCGCGGCGGCCTCAAGGAATTGGAGCGCCGCAGCCAGAGCAGCGGCGAGATCTTGGGGGGAATCCCTGGCCCCAGCGAGCTCGTCGAGAAATTCAAGTCCAGCCTGAAATCATTTAACATGGAGCCTCTTGGATCCAAGCAATCTGGTGTCAAGGAATCCTCTGCCTTCAAAGGCACCATGCCTTTGTCACTGACAGGTGGGCCCATGGAAGTTCCTCCTCTTGATCTGACTGAAATTATGGCAAATCTAGTTAGGCAATCTGGGCCCTTTTTGGATCAACTTGGTGTAAGGAGAGAACTACGTGACAAACTAGTGGAGACATTGTATAGCAGACAAAATCATTCCCTTTCAGCAGATTCATCCTTACTCGGAGATGATAACTCAACGGATGAGCTTGATTTAAGAATTGCTAGTGTGCTACAAAGTACTGGTTATCATACAGATGATGGTTTATGGAACGAACCTTCAAAATACGAGGTTTCAGACAATAAAAGGCATGTTGCAATAGTCACCACAGCAAGCCTACCATGGATGACAGGAACAGCAGTTAATCCATTGTTCCGGGCAGCATATTTGGCAAGAAACTCAAAACAGGATGTCACACTGGTGGTGCCTTGGCTTTGCAAGTCAGATCAAGAACTTGTGTATCCAAATAGCATGACCTTCAGTTCACCAGAAGAGCAGGAAACATATATAAAGAAGTGGCTGGAGGAAAGGCTTGGGTTTGAATCAAACTTCAAGATATCATTTTATCCTGGCAAGTTCTCCAAAGAGCGCCGTAGCATCATTCCTGCTGGGGATACATCACAGTTCATTTCATCGAGAGAAGCTGATATAGCAATATTGGAAGAACCAGAGCATCTGAACTGGTATCATCATGGGAATCGTTGGACTGACAAGTTCAATCATGTAGTTGGCGTAGTTCATACGAATTACCTAGAATATATCAAGAGAGAGAAGAATGGTGCTCTTCAAGCTTTCCTGGTCAAACACATCAACAATTGGGTGACCAGAGCATACTGCGATAAGGTTTTACGTCTGTCTGCAGCAACTCAGGATCTTCCTAAGTCTATTATTTGCAACGTCCATGGTGTAAATCCAAAGTTCCTTAAGATTGGAGATAAAATAATGGCCGATAGGGAGAATGGGCAGCAATCATTTTCCAAGGGAGCATATTTTCTGGGCAAAATGGTATGGGCCAAAGGTTACCGGGAACTGTTAGATTTGTTGGATAAACGTAAAAGCGACTTGCAAGGATTCAAGTTGGATGTATATGGAAGTGGCGAGGACTCACAAGAAGTCCAATCTACCGCCAAGAAACTGAACCTGAATCTAAACTTTTTTAAGGGAAGGGACCATGCAGATGACTCACTCCATGGGTACAAGGTATTCATCAACCCGAGCATCAGTGATGTCCTGTGCACAGCAACAGCGGAAGCTCTCGCGATGGGGAAGTTCGTCATCTGCGCGGAGCATCCATCGAACGAGTTCTTCATGTCGTTCCCGAACTGCCTGACGTACAGGACCCCGGAGGAGTTCGTCGCCAGGGTGAACGAGGCCATGGCCAGGGAACCCCAGCCTCTCACCCCGGAGCAAAGGTACAACCTGTCGTGGGAGGCAGCAACCGAGAGGTTCATGGAGTACTCAGACCTCGACAAGGTTCTCAGCCAACCTGTTACAGAAGGCGTGCACAGAAGCAAGACGAGAAGAACAATTCAGAGTAATCTGTCGGACGCCATGGATGGAGGATTGGCGTTTGCTCACCACTGCCTAACTGGTAGCGAGGTTCTCAGGCTGGCAACGGGAGCGATTCCTGGTACGCGCGACTACGACAAGCAACACTGCGTGGACATGGGCCTCCTGCCGCCTCAAGTGCAGCACCCTGTATATGGTTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MEARASTSPSPQRPASMGRGGGGGGGGGDASAALSFIYRGWREVRDSASADLRLMRARADSLRTLADRELEHLLVSASTTVAAPAPPVAAGAPIAEVEFVRNRIQPKISELRRQYAASGDWELGLGRRVLEGWVAPPPPRGATTARVDLSGITAIRNALVPEVAGGGGASTAWWSGDEMEEEEEKEWEVVRMIRGGLKELERRSQSSGEILGGIPGPSELVEKFKSSLKSFNMEPLGSKQSGVKESSAFKGTMPLSLTGGPMEVPPLDLTEIMANLVRQSGPFLDQLGVRRELRDKLVETLYSRQNHSLSADSSLLGDDNSTDELDLRIASVLQSTGYHTDDGLWNEPSKYEVSDNKRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPNSMTFSSPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREADIAILEEPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCDKVLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMVWAKGYRELLDLLDKRKSDLQGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVNEAMAREPQPLTPEQRYNLSWEAATERFMEYSDLDKVLSQPVTEGVHRSKTRRTIQSNLSDAMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMGLLPPQVQHPVYGW</aaseq>

Gene Sequence

<dnaseqindica>1..684#1205..1237#1412..1480#1844..1931#2016..2482#2560..2826#2907..3256#3370..3889#ATGGAGGCGAGGGCGTCGACGTCGCCGTCGCCGCAGCGGCCTGCGTCGATGGGTAGAGGCGGAGGAGGCGGAGGAGGAGGAGGGGACGCGAGCGCGGCGCTGTCGTTCATCTACAGGGGGTGGAGGGAGGTGCGGGACTCGGCGAGCGCGGACCTGCGGCTGATGCGGGCGCGGGCGGACTCGCTGCGCACGCTCGCCGACCGGGAGCTGGAGCACCTCCTGGTGTCGGCGTCCACCACGGTGGCGGCGCCCGCGCCGCCCGTCGCGGCGGGGGCGCCCATCGCGGAGGTGGAGTTCGTGCGCAACCGGATCCAGCCCAAGATCTCCGAGCTGCGGCGCCAGTACGCCGCGTCCGGGGACTGGGAGCTCGGCCTCGGCAGGAGGGTGCTCGAGGGCTGGGTGGCGCCTCCGCCGCCCAGGGGCGCCACCACCGCCCGCGTCGACCTCTCCGGGATCACCGCCATACGCAACGCCCTCGTCCCTGAGGTCGCCGGCGGCGGCGGGGCGAGCACCGCCTGGTGGAGCGGGGATGAGATGGAGGAGGAGGAGGAGAAGGAGTGGGAGGTGGTGAGGATGATTCGCGGCGGCCTCAAGGAATTGGAGCGCCGCAGCCAGAGCAGCGGCGAGATCTTGGGGGGAATCCCTGGCCCCAGCGAGCTCGTCGAGAAATTCAAGTCCAGCCTGGTAATTTCCGCCCTAAACCTAATTGTTTCTCTTATGCAAGTTCTTTGTATGAAAAAAAAAAAACAAGAATTCGAGACTTGGTACTTGCATGACCTGTATACAAAGCAATAACAGTAGAACAATCTGTTAATGAGTGGTGATTGCTAAAAGGGGCTTGCTCGCATTGCGAGCTCACTCTCATGCCAATCTCAGATGCTGGCCGAATGTAAAAATTAATTGTAAAATGTAAGGAAAAATTATAGCTACAAACCCTAGTAAGAAAATGTAGGCAATAATTTATGATTGCTATCTTCATTTTTAGTTCATTCTTACAAAAGTATAAGCATGATTTTTAGTTCTTTGTGTGCCAATGTATATGATTCCTAACTTGATTACTATATATCTTGATTGAATGATTATGTCATTTGGTTCATCCAATTAGAAAAAAAAAAGGTGGTGTTGTCACAAGTGTTTGTTTTAAGAGCAAAAGGTGCTATCTGGCTTAATCACATTCTCACCTATATTTGTTCCCTTGGTGCAGAAATCATTTAACATGGAGCCTCTTGGATCCAAGGTAACTCCACAAACCATAAAATTAATATGACTATAACTATACTGTTTACTGATAGAACATTCATTTACCATCTGAAGACATCCCTTTGCATTATATGATTACATTATTTCAAAACAATTCTGGGGAAATCAACGTTCAGTAAATTTTTTCCCTCTATGATATGATGAACTGCAGCAATCTGGTGTCAAGGAATCCTCTGCCTTCAAAGGCACCATGCCTTTGTCACTGACAGGTGGGCCCATGGTTCATCGGGCCCACATGTCAGTGACATAGGCACATACCTTTGAAGGTAGAGGAGCCTGATCCGTCAAGGAACATGCCATGAGAAGGGAACTAGACTTTAAATCTGTATAGACACTGTTAGATGATAAATGGATTTTCATCCAGTGCCTCATTTCTCCTGAAAAGTGCCTAGTCTTAAACTCTTTAGTTATATACTGCTTAGTTATGCCTTAATATGGAATGATAGTGTGAATAAGTAGGATGTTTCATAAAAGAAAGCAACCAACAGTCCTATCAAAAGACACTATAGCCAAATTTTTGTTCTGAACTTTTGATGCTTGGTTAACATCATTGCATGTATAATCTTTGAGCATAATAATGCAGGAAGTTCCTCCTCTTGATCTGACTGAAATTATGGCAAATCTAGTTAGGCAATCTGGGCCCTTTTTGGATCAACTTGGTGTAAGGAGAGGTATGCATAAAAAGCAACACTGTTGTATTTCATTCCATTTATTAGGTGATGGCCCTCTTATATGCTATTGGTACTATGGTGCAGAACTACGTGACAAACTAGTGGAGACATTGTATAGCAGACAAAATCATTCCCTTTCAGCAGATTCATCCTTACTCGGAGATGATAACTCAACGGATGAGCTTGATTTAAGAATTGCTAGTGTGCTACAAAGTACTGGTTATCATACAGATGATGGTTTATGGAACGAACCTTCAAAATACGAGGTTTCAGACAATAAAAGGCATGTTGCAATAGTCACCACAGCAAGCCTACCATGGATGACAGGAACAGCAGTTAATCCATTGTTCCGGGCAGCATATTTGGCAAGAAACTCAAAACAGGATGTCACACTGGTGGTGCCTTGGCTTTGCAAGTCAGATCAAGAACTTGTGTATCCAAATAGCATGACCTTCAGTTCACCAGAAGAGCAGGAAACATATATAAAGAAGTGGCTGGAGGAAAGGCTTGGGTTTGAATCAAACTTCAAGATATCATTTTATCCTGGCAAGGTAACTATCATACATTTTTTTGTCAAGGTGCATATCTTGAATAACTCAACTGATATGCTGTATGCCGTGCCCTGCAGTTCTCCAAAGAGCGCCGTAGCATCATTCCTGCTGGGGATACATCACAGTTCATTTCATCGAGAGAAGCTGATATAGCAATATTGGAAGAACCAGAGCATCTGAACTGGTATCATCATGGGAATCGTTGGACTGACAAGTTCAATCATGTAGTTGGCGTAGTTCATACGAATTACCTAGAATATATCAAGAGAGAGAAGAATGGTGCTCTTCAAGCTTTCCTGGTCAAACACATCAACAATTGGGTGACCAGAGCATACTGCGATAAGGTGCTGTATCTAGCTCAACTTGTTCTGGTATCATCTGGATGCACTTCAGTTTCAGTATTGCTAATGAATGGCTTATGCAGGTTTTACGTCTGTCTGCAGCAACTCAGGATCTTCCTAAGTCTATTATTTGCAACGTCCATGGTGTAAATCCAAAGTTCCTTAAGATTGGAGATAAAATAATGGCCGATAGGGAGAATGGGCAGCAATCATTTTCCAAGGGAGCATATTTTCTGGGCAAAATGGTATGGGCCAAAGGTTACCGGGAACTGTTAGATTTGTTGGATAAACGTAAAAGCGACTTGCAAGGATTCAAGTTGGATGTATATGGAAGTGGCGAGGACTCACAAGAAGTCCAATCTACCGCCAAGAAACTGAACCTGAATCTAAACTTTTTTAAGGGAAGGGACCATGCAGATGACTCACTCCATGGGTATGTATCACTCAAGAAAAACAGTGTGCTCTCAGGTTCCATATCATTTCATCATCTGTGTTTACCTTTTGGTGATCACTGATCCAGCTGCCTTTCTTTTGTGCTACTTTCAGGTACAAGGTATTCATCAACCCGAGCATCAGTGATGTCCTGTGCACAGCAACAGCGGAAGCTCTCGCGATGGGGAAGTTCGTCATCTGCGCGGAGCATCCATCGAACGAGTTCTTCATGTCGTTCCCGAACTGCCTGACGTACAGGACCCCGGAGGAGTTCGTCGCCAGGGTGAACGAGGCCATGGCCAGGGAACCCCAGCCTCTCACCCCGGAGCAAAGGTACAACCTGTCGTGGGAGGCAGCAACCGAGAGGTTCATGGAGTACTCAGACCTCGACAAGGTTCTCAGCCAACCTGTTACAGAAGGCGTGCACAGAAGCAAGACGAGAAGAACAATTCAGAGTAATCTGTCGGACGCCATGGATGGAGGATTGGCGTTTGCTCACCACTGCCTAACTGGTAGCGAGGTTCTCAGGCTGGCAACGGGAGCGATTCCTGGTACGCGCGACTACGACAAGCAACACTGCGTGGACATGGGCCTCCTGCCGCCTCAAGTGCAGCACCCTGTATATGGTTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008379