BGIOSGA008405

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Revision as of 03:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008405| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008405, complete gene.| tag = OsJ_070...")
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Gene Name

BGIOSGA008405

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008405, complete gene.

LocusTag

OsJ_07091

Ensembl Transcript ID

BGIOSGA008405-TA

Ensembl Protein ID

BGIOSGA008405-PA

Length

6157

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22298218..22304374

Sequence Coding Region

22298218..22299852,22299935..22300003,22300083..22300151,22302142..22303528,22303642..22303746
,22304343..22304374

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22298218..22304374 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22298218..22304374 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGGCCCAGCGGCGCAACCGACACGGCCAACGCGGCCGGCGGCGACGCAACGCTGGCTGTTCCTCCGCCACCGCCGCTGCTGACCGGAACGGCCGTTCCGCCGCCCCCGCCGGCAGCTGCCCAGCCGCAACCACAGCAAGCAACGGTGGCGGAGGGTGACCCGCCGCCGCCAGCAACCGGTGGTGCAGAGGAGGTGGCCGGCAACGGCGAGCCTCCTCAACCGCCCGCCACTGATCCGGCGAGCGAACCCACTGCGCCGCCGGAACCACCGCGAGCAACAGAGGAGAAGAAGGGTGACGAGCCACCACCACCGGCATCAACCGGAGTGAAAGAGGAGGTGGCCGGCCATGGCCAGCCTCTTCCACCGCCCACCAGTACTCCGGCGAGCGAGCCCCCTGCGCCGCCGGAACCAACACAGCAGCAGCAGCAGCAGCAAGCAGGCGACGCGGCGAAGCAGGCGGCGCCGTCTGCCGACGACGAGGACGGAGGTAAAAAGAGGCACAGCCGTTGGAACTTCCTCCGCAACCTCTTCCGCCGCCACAAGGGCTCACTGCGCGACGCCGTGAAGGCCGCCGCTCTCACGAAGCCGCGGAAGGAGGAGGAGGAGAAGAGCAAGAAGACCGCCGGGCCCGATGAAGCCAGCAAGCTGCCCCCGCCGCCGGCTCCACCTCCCGCTCCCGACGATGACGCGGCTAGCTGTAGCCGGTGTACGCGGAGGAGGCTCGTGAAAGTGCTACGGGCCGTCCAATTCATCACGCGGTTGAAGAACTGGAGGAATCGCCCATCGGAGGACGGTAAAGCCAAAGAGGAGCAGAAGCCGTCTCCGGAGACGAAGGACAAAAAGCCACCGGAGACGACGGGGAAGGACAAAAGGCCGGCGGACCCGGAGCTGGGGCAAGCGAAGGAGAAGACGCCGGCGCCGCAGCAAGAGGAGGAGAAGAAGGAGAAGGAGGAGGAGACGCCAGAGGCGAAAGCGCAGCGGCTAGAGGAGGAGAAGTCACGGCGGAGGTGGAAGGAACGCGGGGAGGCGCTCCTGCAGGAGATCCTCGAGGCCGCCTTCGAAGCGCTGCTCGCCGGCGAGTTCAACAAGCTCAAGGATCAGTGGCGGCAGTGCCTCCTCACCTTCTCCTTCTTCCCCGTCAACCACAAGGTGAAGAAGCAGGCGGTCACCTACTGGTGGGCCGCCAAGTTCGGCCTCCCGCACCGCCGCGGGTCGGAGGAGATCTTCGCCGAGCTCTGCGCCAACGGCTTCCTCGAGCCGATCACCAGCCGCTGCAGCGGCGCGTCCCACGGCTGCCGCGTGAACCCGCTCGTCCACTGGATGGTGAAGCGGACGGCGAGGGGCGGATTCGCCAGCCTGGACCAGCACGGCCACCCCACCGTCGATCCGGGCAAGTCCAGTGTCCTCTGCCTCACGGAGAGCCACCGCGAGCTGCTGCAGAGGCTAGGCAGGGCCGACAAGTCGCCGTCGGCGCCACCGTCCCCGACGAGAAAACTTTCGAAAGTCAAAACGCCCAGCCAACAAGACCGTCAGCAAAAAGAGGCAAAAGAAGACCGTCAGCAAAAGGAGCCAAACCCAACAGGAACGCCCTCCAAAATAGCCGTCAGCAAACTTGAGGGCGAGACGACACAAAAGAAGCCAAACCCAACAGGAACGCCTTCCGAAATGGCCGTCAGCAGACTTGAGGGCGAGACGAAGCAAAAGAAGCCAAACCCAATAGGAATGCCTTCCAAAATGGCCGTCAGCAAATTTGAGGGCGAGATGAAGGAGCAACAAAATGAAAATGACAAGATCAATCTCAAGCTTGAGCTCCAGAAGTTTCAAAACATACATGTAATCCTCAACATCAATGCACATGTGTATCGGCTCCCATATTGCTTGTTATCCTATCTTGGTGATCGCCTGGTAGTCCTACAACTTGGTCGATGGTGGAACTCCGATAATAGCACATACATGGAGGTGGAGGGGCTAGAGAAACTGAATGCCATCGGCAACCTCAAGAAACTCCGATACCTTGGCATTCGTGGGTTGTCAAAGCTGACGGAGCTACCCAAGAATGTCAACAAACTACAACAACTTGAAGTCCTGGATGTTCGTGGGTGCCAAAACCTGACCCGTGTGATGTCATCTACTGTCAGGAACCTTAGGCAGTTGACCCATTTGGATCTCACTGAATGCTACATGCTGGAGCATATTGGATCGGAGATCATCTCCCTCTCAGAGCTTCAAGTATTCAAGGGTTTTGTCTTTGGCATTGATGCACCAAGGAGAAAAGCATTCCAATGTCGAGATTGGCATGCGTGTCATTTGCAAGACCTCAAGGTGATGAAGAATCTCCAGAAGCTCAGTATCAATGTTACAACTGATGCAAATGTTGACAAGATTGATATGGGGCAACTTAAGCATCTTGAAAGCCTCCAATCACTAACAATAACATGGGGTGAGTTGCCAAGCATCTTAACATCTGCAGAAAGAGAAAAGGAGAAAAATCAACTCCTTGAGAGGTGGACTAGCCTAGTGTTGCCGTCAAGTCTTGTGAAACTAGATGTCCGATGCTATCCCAGAGAAGAGATCCCATTTGAGTGGTTTGAACCAAAAGGGGCCATTAAGCCCAAAAAGCTCAGGAAACTATATGTGAGAGGTGGAGCCGTTAAGGAACTAAATCTTCCCAAAGATAACCAAATTGACACTCTGCGCCTAAGATATCTCAAGGAATTCAAAATGAAATGGGAAGAAATATTGGGTATGATGAACAATCTCCATTATGTGGAAGTTGTTTACAAGGATCCTAAGGTGATGAAGAGTGAAAAGATAAAACATCAAACAGATAATGTCGAGCTACAACCTCACATAATTAAGGAGAAGGAAAAGAAGGTAAAGGAGGAAGAGGAAAAATGTATGGCGGAGATCAAAAAAAATATGAGCATACCAGATTCTACCTTGGATGAGCATGGGGTGTGGGTGAAGGATCAAAAGGAAGCTGATCAAAAGAAGGCAAAGGAGGAAGAGGAAAAACATATGGCGGAGATCAAAAAAAATATGGGCATACCAGATTCTACCTTGGATGAGCATCGGGTGTCGGAGAATGATCAAAAGGAAGTTGATCAAAACAAGAAGGGCAAAGGCTGTGAGGGTGATGGGGATGGAAGCAAAGAATCTAGTAACTCTCAGAGTAAGGTGCATGATGGTCATGATTCCAAGGCTACTATCAACAATAATGTTACAAAAGTTTCTAGTGAATCCGACCTGACGGGAAAAGAACAAAAGGAAAAAACAAGTAGGCGGTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MDGPSGATDTANAAGGDATLAVPPPPPLLTGTAVPPPPPAAAQPQPQQATVAEGDPPPPATGGAEEVAGNGEPPQPPATDPASEPTAPPEPPRATEEKKGDEPPPPASTGVKEEVAGHGQPLPPPTSTPASEPPAPPEPTQQQQQQQAGDAAKQAAPSADDEDGGKKRHSRWNFLRNLFRRHKGSLRDAVKAAALTKPRKEEEEKSKKTAGPDEASKLPPPPAPPPAPDDDAASCSRCTRRRLVKVLRAVQFITRLKNWRNRPSEDGKAKEEQKPSPETKDKKPPETTGKDKRPADPELGQAKEKTPAPQQEEEKKEKEEETPEAKAQRLEEEKSRRRWKERGEALLQEILEAAFEALLAGEFNKLKDQWRQCLLTFSFFPVNHKVKKQAVTYWWAAKFGLPHRRGSEEIFAELCANGFLEPITSRCSGASHGCRVNPLVHWMVKRTARGGFASLDQHGHPTVDPGKSSVLCLTESHRELLQRLGRADKSPSAPPSPTRKLSKVKTPSQQDRQQKEAKEDRQQKEPNPTGTPSKIAVSKLEGETTQKKPNPTGTPSEMAVSRLEGETKQKKPNPIGMPSKMAVSKFEGEMKEQQNENDKINLKLELQKFQNIHVILNINAHVYRLPYCLLSYLGDRLVVLQLGRWWNSDNSTYMEVEGLEKLNAIGNLKKLRYLGIRGLSKLTELPKNVNKLQQLEVLDVRGCQNLTRVMSSTVRNLRQLTHLDLTECYMLEHIGSEIISLSELQVFKGFVFGIDAPRRKAFQCRDWHACHLQDLKVMKNLQKLSINVTTDANVDKIDMGQLKHLESLQSLTITWGELPSILTSAEREKEKNQLLERWTSLVLPSSLVKLDVRCYPREEIPFEWFEPKGAIKPKKLRKLYVRGGAVKELNLPKDNQIDTLRLRYLKEFKMKWEEILGMMNNLHYVEVVYKDPKVMKSEKIKHQTDNVELQPHIIKEKEKKVKEEEEKCMAEIKKNMSIPDSTLDEHGVWVKDQKEADQKKAKEEEEKHMAEIKKNMGIPDSTLDEHRVSENDQKEVDQNKKGKGCEGDGDGSKESSNSQSKVHDGHDSKATINNNVTKVSSESDLTGKEQKEKTSRRS</aaseq>

Gene Sequence

<dnaseqindica>1..1635#1718..1786#1866..1934#3925..5311#5425..5529#6126..6157#ATGGACGGGCCCAGCGGCGCAACCGACACGGCCAACGCGGCCGGCGGCGACGCAACGCTGGCTGTTCCTCCGCCACCGCCGCTGCTGACCGGAACGGCCGTTCCGCCGCCCCCGCCGGCAGCTGCCCAGCCGCAACCACAGCAAGCAACGGTGGCGGAGGGTGACCCGCCGCCGCCAGCAACCGGTGGTGCAGAGGAGGTGGCCGGCAACGGCGAGCCTCCTCAACCGCCCGCCACTGATCCGGCGAGCGAACCCACTGCGCCGCCGGAACCACCGCGAGCAACAGAGGAGAAGAAGGGTGACGAGCCACCACCACCGGCATCAACCGGAGTGAAAGAGGAGGTGGCCGGCCATGGCCAGCCTCTTCCACCGCCCACCAGTACTCCGGCGAGCGAGCCCCCTGCGCCGCCGGAACCAACACAGCAGCAGCAGCAGCAGCAAGCAGGCGACGCGGCGAAGCAGGCGGCGCCGTCTGCCGACGACGAGGACGGAGGTAAAAAGAGGCACAGCCGTTGGAACTTCCTCCGCAACCTCTTCCGCCGCCACAAGGGCTCACTGCGCGACGCCGTGAAGGCCGCCGCTCTCACGAAGCCGCGGAAGGAGGAGGAGGAGAAGAGCAAGAAGACCGCCGGGCCCGATGAAGCCAGCAAGCTGCCCCCGCCGCCGGCTCCACCTCCCGCTCCCGACGATGACGCGGCTAGCTGTAGCCGGTGTACGCGGAGGAGGCTCGTGAAAGTGCTACGGGCCGTCCAATTCATCACGCGGTTGAAGAACTGGAGGAATCGCCCATCGGAGGACGGTAAAGCCAAAGAGGAGCAGAAGCCGTCTCCGGAGACGAAGGACAAAAAGCCACCGGAGACGACGGGGAAGGACAAAAGGCCGGCGGACCCGGAGCTGGGGCAAGCGAAGGAGAAGACGCCGGCGCCGCAGCAAGAGGAGGAGAAGAAGGAGAAGGAGGAGGAGACGCCAGAGGCGAAAGCGCAGCGGCTAGAGGAGGAGAAGTCACGGCGGAGGTGGAAGGAACGCGGGGAGGCGCTCCTGCAGGAGATCCTCGAGGCCGCCTTCGAAGCGCTGCTCGCCGGCGAGTTCAACAAGCTCAAGGATCAGTGGCGGCAGTGCCTCCTCACCTTCTCCTTCTTCCCCGTCAACCACAAGGTGAAGAAGCAGGCGGTCACCTACTGGTGGGCCGCCAAGTTCGGCCTCCCGCACCGCCGCGGGTCGGAGGAGATCTTCGCCGAGCTCTGCGCCAACGGCTTCCTCGAGCCGATCACCAGCCGCTGCAGCGGCGCGTCCCACGGCTGCCGCGTGAACCCGCTCGTCCACTGGATGGTGAAGCGGACGGCGAGGGGCGGATTCGCCAGCCTGGACCAGCACGGCCACCCCACCGTCGATCCGGGCAAGTCCAGTGTCCTCTGCCTCACGGAGAGCCACCGCGAGCTGCTGCAGAGGCTAGGCAGGGCCGACAAGTCGCCGTCGGCGCCACCGTCCCCGACGAGAAAACTTTCGAAAGTCAAAACGCCCAGCCAACAAGACCGTCAGCAAAAAGAGGCAAAAGAAGACCGTCAGCAAAAGGAGCCAAACCCAACAGGAACGCCCTCCAAAATAGCCGTCAGCAAACTTGAGGGCGAGACGACAGTACGTATAGACTCCTCCCCTCTCATTTTCAAATTGGGTGTGGATTATTACCGATTTACACTTTTCAACTTTGACTCATCAGCAAAAGAAGCCAAACCCAACAGGAACGCCTTCCGAAATGGCCGTCAGCAGACTTGAGGGCGAGACGAAGGTACGTATAGAATCCCCTCTCATTTTCAAATTGGGTGTGGATTATTACCGAATTACTATTTTCAACTTTGACTCGTCAGCAAAAGAAGCCAAACCCAATAGGAATGCCTTCCAAAATGGCCGTCAGCAAATTTGAGGGCGAGATGAAGGTACGTTTAGACTCCTCTCTCATTTTCAAATTGGGTGTGGATTATTACCGATTTACTGTTTTCAACTTTGTTGTTATTAATAGTTTTATATGGTTAGGGTATGGTTTACAATATAACATATTTATATGGTGCAACATATTTTAAATAGTATGACTTTTTTTTTGCGGGGCAATAGTTTGCCATATTTGATAGTATTAATAGAAAGGGGTTGTGAAAAATTGAGTGAATTTGTGTATTTCATACCTTGGTTCCCGGGCACCATGGTATATATATATATATCCTACATTGCGAAATCTACTGCCAAGGTTATTTATAAACTCTCTTCGTTTTAAGTTACTTGTCGTTCTAGTTTTATCCTAAATCAAACATGTATATCTTTCACCATTGATTTTAAAAACCCGTGTAATTTAATGGCATGTGAATTATATATTATGAAATTATTTCTCATGATGAATCTAAAATTAAAAATCTTAGAAATCAAACTATATGAGTATAGAAAATTATGGTCAAATATTATAATGTTTGACTTAGGACAGACTAAAACAACTAGTAATTTAAAACGAATGGTGCATTTTCAATTAATAAGGGGCAGTTGGTCTTTTTAGCCCTATCTTAATTTTCATTCTAGTGAGTTTTTTTTTAAAAAATAATAATTTGCATTCTAGTGGCTAAAATTGGAGTTATTTTGGTACTGAGGCAGTAACAAAGTTCTTTTCTACCATGTGCATAATTTAGGGAAGCATTACCACAATATGGAAAATAAATGTAAATTTCTAATAGTGTGGCTCAAATACAAATAAAAATATTCCATCTAATAGAAAACCCCTATTAATTAGTTTCACACTATTTATCTGGTGCTAGTACACATGCTATAGAATTAAAAGCACTTTGGCCTTTATTTGAAATTATGAAACTAGAAAACTCATAAGTACCTAAAATTTGGCCTAAAAATGTATAATGAAGGAAAAATAAAGTCATATCCAAATATTAGTCAAATTCCTATATGTACATATATATTAATTTGTAAATTTAAATGTTATTTTTTAGTTATGTTAACCATGTTGAACGGGATGATGTATAAATATTATCTAATGGCATACATTCAGAAATAGAGGCAGTACATTGTATATGCCCAAATCTCTGAACTGATATGTGATGTCCATCATATCCTTGGCATATTTATTAACATATTTATTAGAGAAAAATGGAAGAACTTATTTTTCATATATCCAAAACAATCCAGATTTTTTATCAGTTAGAAATATAAAAGCTTATGCAATTATATATAATACTATAAAAGCCATGCTAGACACCATATTTTCTCCCAATGTGTTATAAATTACTACATTAATCAGCGAAGGAAAAAAAGACTTATTTTGTCGATCATAATGATCGGTCTAGATTATAATGGTGTAAATTGATTGACAGCTATATACAAGAGACAATTGTCTTTATATTATTAGAAGAAAGGGTTGTATATCAATTATAGACATTTTCAAATAAACTTTAATCTAGCTCCGCTCAATTGTATGGGAAATTTATATACTCCTCGTTTGATCTTTATGAAAAATACAAACCTATATTAAGATGCAAAGCAACATGTTTATGTATTAGCATCATGCAACAAGTACTTTTACTCTACTTTGAAGGTGGTGTGAATGTCCAAAACAAATAAGTATTTCTAATCGGTGTGGGGATAAGATATTGTCACATATCTGGGCAATAAAATTTTTAATTATTTGTATGTCTAAATAAATACACATTTGTACCCTAGATTTGAATTTTGAATGCTTGAGGAAGGATTGGTCAGGTAATGATTCAAAGACGCATGATTCATCTCCCATGTGTTCACTTTTTTTATTTGAAAAATAGAGTACATATAGTGAAGGTCTAGTTTGTGTGAAAGATGTAAACATAGACTACCAAAGTGTTGTGCTTTGTGCTGCATGCACATTTGAATTGATATTCTTCTATCTCTTCTTTGCTCTAGGAGCAACAAAATGAAAATGACAAGATCAATCTCAAGCTTGAGCTCCAGAAGTTTCAAAACATACATGTAATCCTCAACATCAATGCACATGTGTATCGGCTCCCATATTGCTTGTTATCCTATCTTGGTGATCGCCTGGTAGTCCTACAACTTGGTCGATGGTGGAACTCCGATAATAGCACATACATGGAGGTGGAGGGGCTAGAGAAACTGAATGCCATCGGCAACCTCAAGAAACTCCGATACCTTGGCATTCGTGGGTTGTCAAAGCTGACGGAGCTACCCAAGAATGTCAACAAACTACAACAACTTGAAGTCCTGGATGTTCGTGGGTGCCAAAACCTGACCCGTGTGATGTCATCTACTGTCAGGAACCTTAGGCAGTTGACCCATTTGGATCTCACTGAATGCTACATGCTGGAGCATATTGGATCGGAGATCATCTCCCTCTCAGAGCTTCAAGTATTCAAGGGTTTTGTCTTTGGCATTGATGCACCAAGGAGAAAAGCATTCCAATGTCGAGATTGGCATGCGTGTCATTTGCAAGACCTCAAGGTGATGAAGAATCTCCAGAAGCTCAGTATCAATGTTACAACTGATGCAAATGTTGACAAGATTGATATGGGGCAACTTAAGCATCTTGAAAGCCTCCAATCACTAACAATAACATGGGGTGAGTTGCCAAGCATCTTAACATCTGCAGAAAGAGAAAAGGAGAAAAATCAACTCCTTGAGAGGTGGACTAGCCTAGTGTTGCCGTCAAGTCTTGTGAAACTAGATGTCCGATGCTATCCCAGAGAAGAGATCCCATTTGAGTGGTTTGAACCAAAAGGGGCCATTAAGCCCAAAAAGCTCAGGAAACTATATGTGAGAGGTGGAGCCGTTAAGGAACTAAATCTTCCCAAAGATAACCAAATTGACACTCTGCGCCTAAGATATCTCAAGGAATTCAAAATGAAATGGGAAGAAATATTGGGTATGATGAACAATCTCCATTATGTGGAAGTTGTTTACAAGGATCCTAAGGTGATGAAGAGTGAAAAGATAAAACATCAAACAGATAATGTCGAGCTACAACCTCACATAATTAAGGAGAAGGAAAAGAAGGTAAAGGAGGAAGAGGAAAAATGTATGGCGGAGATCAAAAAAAATATGAGCATACCAGATTCTACCTTGGATGAGCATGGGGTGTGGGTGAAGGATCAAAAGGAAGCTGATCAAAAGAAGGCAAAGGAGGAAGAGGAAAAACATATGGCGGAGATCAAAAAAAATATGGGCATACCAGATTCTACCTTGGATGAGCATCGGGTGTCGGAGAATGATCAAAAGGAAGTTGATCAAAACAAGAAGGGCAAAGGCTGTGAGGGTGATGGGGATGGAAGCAAAGGTACACACTTCACCTACTATCTTGCCTTTAATAAATTTTGAGCATGCAATTGATTTCTATAGTTTTTCACACTTCTACTATATAACTACATTCCCTATTTCCATATGCTCTAGAATCTAGTAACTCTCAGAGTAAGGTGCATGATGGTCATGATTCCAAGGCTACTATCAACAATAATGTTACAAAAGTTTCTAGTGAATCCGACCTGACGGGAAAAGGTGAAATCATGATGCTACATAATATTTTTCTACAACTCCATACACATTTATATTAAACTACATTTTACAATTTTTGAACATTCAGAAGGTGCTCAAGGTACTAATTAGGATGTTGATATCCCAAAGGAATCTCACAATGTTGAAAATGCTCGTACTTGTAAGAACTGTGAATACTTTGAGAAAATTAGGAAGCACCATCATAAAGATAGCAAATGGAAAAATGTCATCGCATGTGAAAATGATATGTGGAACCTAATTTTTTTGATGGCACCAAGAAAATTGGATCACATTCATTTTGTATAATAAAATTCAAATATATATATATATATGCATTTTCATTCGAATCTTTAAATGATGTTCAAGCTCATAATACCGAGCTACCCAAAAAAGGATACTCCTTAAACAGGGGGTCGTTGCCGATCATGACACCTTGAGTGCCCTAAGGTATTTCTAAAAAAAAAGGTGATAATGGTGGAAATATACAGTTATCTTCTATATTAGAAGATGGAGATCATCATATATAAGAGTTTTAATCACTCATATATTGTACCTTTCATGTAGTTTTAACAAGAACTAATATGTGTTTGCATTTTCAGAACAAAAGGAAAAAACAAGTAGGCGGTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008405