BGIOSGA008423

From RiceWiki
Revision as of 03:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008423| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008423, complete gene.| tag = OJ1008_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008423

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008423, complete gene.

LocusTag

OJ1008_F08.3

Ensembl Transcript ID

BGIOSGA008423-TA

Ensembl Protein ID

BGIOSGA008423-PA

Length

5384

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22617561..22622944

Sequence Coding Region

22617561..22617939,22619464..22619501,22619638..22619666,22620088..22620133,22620257..22620371
,22620480..22620547,22620981..22621664,22621870..22621971,22622579..22622944

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22617561..22622944 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22617561..22622944 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAGAGGCGCCATCGTCGACTCTCCTCTCCTCAGGCCCAATGTTGGTGCAGCGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTTTGGGAGACTGCAACAGCCGCCTTCCGGCTTTCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTCGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAATAACCCACTCGTGCCGGCTTGTGTTGCGTCATCTGTCCGCTCCTCTTGGTTCCTAACAGCAAGTCCAGGCATCGCCTCACTCCAGGTGGCTGGCCGAGCAATGTCTGAATTTTTGACAGGCAGTTTTCAGGGTGAGCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGGGTATGCATTGACAACAGCACCTGCAGCGACTTCACCTTAGTGAAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCATGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCTCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGA</cdnaseq>

Protein Sequence

<aaseq>MRRGAIVDSPLLRPNVGAALGQGAAMPAVHLDFGRLQQPPSGFRLHNVRNLPLQFTSTHLEGSRIRRGRRRFLPSRREVAAAIHVLVESCWNNNPLVPACVASSVRSSWFLTASPGIASLQVAGRAMSEFLTGSFQGEQALLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIRRKDGRTLQKDEAGRVIKCLEAAISRRVSEGFTLELCGRDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVMLNVKKVPSSPSSSSSAAAANGKSPGQPASGALSRTSFFSFGNLFAKLRA</aaseq>

Gene Sequence

<dnaseqindica>1..379#1904..1941#2078..2106#2528..2573#2697..2811#2920..2987#3421..4104#4310..4411#5019..5384#ATGCGGAGAGGCGCCATCGTCGACTCTCCTCTCCTCAGGCCCAATGTTGGTGCAGCGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTTTGGGAGACTGCAACAGCCGCCTTCCGGCTTTCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTCGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAATAACCCACTCGTGCCGGCTTGTGTTGCGTCATCTGTCCGCTCCTCTTGGTTCCTAACAGCAAGTCCAGGCATCGCCTCACTCCAGGTGGCTGGCCGAGCAAGTATGCTCAGTTCATAGATCTTGGTATTCAGGTGTATATGTTCTGCAATAGAAAGTTTACGAAGAATGCAAAATTACGAAGAGTAGGACGCAAACATCCTCCTTCTATCAGATCATCTGTCGCCCAATGACTTCCAATCTCTGGCCTGTTGCAAAAGGAAAAAAAAAAGCATCGATCGAAGACCTCGCATGCAGTTCATCTGGCAGCCGCTTCTCAAGATTCAGTCAGCAGAGAGCTCGATGCGTAGTAAACAATGGACCAGAACAAAAACCAAACTAATCAAATATCTCAAAATAAAAGTGGTGGCTGTTCACATATGACCCCGAGTAGAGTGTCCGTCATGCGGAACAGCGGAAGCATTGAAGGAGGGCCGGGGGATGGCGACCCTGTCTGGCAGATCAGGTAGAGAGCGGTGCCTACTCGGCAAGCAAGCAATCAACGAGAGACAATAGTCTGCATAGGAGTAACGAGGCAGAGTTCGACCATTGTGTGATTGGATCCAAAGTCCAATCTTAGTCCGGTGAATTGGACGGCTCTTTGGGGTCTTCAACTGTAGCATTATGGACGCCCTTGTAAGAAGCGTCCCCATCTGGACGTTGTCTAAAACAGCGTCCACACCTGGACGCCCTATGCAATAGTGTCCTTCCTATTTTCGTAAAAATTGACTTTGCTTTATTATATATTTAATTTCTGCATTATTAATTATTATGAATAAAAAATTCGGCCTAATCAACATCACAACAAGAACCTCTGAATTAAAAAAAAACACAGTAATAACAGGTATAAGTAACAAACCACAACGAACCCTAATAAGTTCAGATAATAGAAAAGGTCTTCTCAAGATTCAGTCATGGCGATCGCCGCAAGCAGGGCCAACGCCAACGCCAACCGAAGCCGCCACCATCATCAACCGAGGCGGTGGGAAAAAAATTCCTCCCAATGCTGGCACGCACGCGCACTCGCTCGAGAATCCGGCGGGTGGGACTGAAAAAACAAAACAAAAAAAAGCAGATCGATTTTGTCATCTGCGGCGCAAAGCGGGTGTGCATTTCTTTTCTTTTATCCCCACATCCAGTCACCGTGACGTGGTTCTTGATTCCTCAGGCCGGGCGATTATTCTAGCTCTAGTTGGGATGATTGGATTGGATCCCCAGCCAGCAGCAGCAAGCAATTCTTGGCCATCGGTTGTGGGTGGCTGTTGATTCATGCATCACGAGCACTCAATAAAGTATGCAGATCTGTGCGCCCCTCTCTGATTTGTTCATCCAGGCAAAAGAGTATCTTGCTTCTGTGAGGTGAGGTGATTGATTGATTGATCAATGGGGGTGGATTGTTTTCAGGGAGATGTGTATATGTTGTGTTTGCAGTAGCCCATGGTTTCTTGGCAATTGTTAGTTTTCTGATCACAGTGGTTCAAGTTGGTTGCCTTTTTTTATGGTTATAAGCGATGTGCTCTGAACTTCTGATCCAGATTTCGATCCAGTTCTGCCTGCGATTCTTGAGTTTTTATGTGTTCCATGTCAGTGTCTGAATTTTTGACAGGCAGTTTTCAGGGTGAGCAGGTGCGTTCAGGTTTCAGGTATCGTTGTACAGAAATTGACTCGAAACTGCTCATGACTTTTTCAGGATACTAAAGCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTTCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGGTTGGTCTAATCTACTCTCTAAAGTAATTTAGATCTTCTTTATGAGGAGCCCATCATTGGTCCGGTGATGATTTTAAGATCGAAGTTTCTACCCTCATGATTGGAAACTATCACAGATGGTTCACAAGACGAAACTGTGTACTTCTGTTTGCTTATATATATCTGCATACCTCGCATCATTACAGTGCTGGTTTTCAACTCGTAATTCTTTCAGAGGGAAGATTCGTAACCTTGGAAGATATGCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGTGGATCTCTAATTTAAACATCTAAATTCCAGAGCTCCTCATATCATTATCCTGTTTCATTTCAGGCTATTGTCGGAAGCTCCGCTACTTTCTGTAGCTAACAAGCTGATAATTTTCTGCAGGGTATGCATTGACAACAGCACCTGCAGCGACTTCACCTTAGTGAAGGTAAGAACTACTTACTACTCTCTCTCAAAACTTGACTGGATAATCTTACTGAACACTGCTTCCAATATTCAAGAACCGTTTCACTGATTGCTTCGAGCACCGTCTGTTTGCGTTTGGAGGTAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGGTAAGGCAGCCTATGCTATGCAATTATATCATATATATGCAAACTCATGTATGGTTCGCGGACATCAATTGCCGGTTTATTCATGATGTCTGTTACAATCTGATGCAGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGTTTGTAATTTTTTTTCCACCTGAAAATTGGTCTTAAAATTTACCACCTGAAAGTTGAAAACCTATTTTATCCTCTATATCAAGCTTTCAGAATTATTTTTGGTGCAACTGCATCCTGATAGTGTTTGGTTTGAAAGTATTGGTAGTTTAGGTGAAGTATTTTCGTATCTGTTCATCATGTCAGTATGTGTTTCAGTTTTTGAAAAACATTTTAAAGGTTTTCCTTTAATGAATTACAAATTTAGACCGCAGTACTATTTTTCATGAGGTTTTTGGAATGGATAGTGGAGATATGGAGCCAACAATTCCTTTGAAAACTTTCCATGAAATCAAGAATTTTTTTGTGACTATAGATTTACACTGAAGTGTAAATTAAAGTTGAAGTGAAAAACTGAAAACTGAAGTGGCAGTATCAATTTGGTTAAAATTGCAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCATGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGTGTGTACTCTGGACTCTAGCATGTCAACAGCTGCTACTACTATATCGAAGCTCCTACCACGACAATGCTAAGAATTTCACATGAAATAATTCGATTTGTAGAAAGAATATTCCTGCGTTTTAAAGGAGCTATGCGCCGCGACTCGGTCAACGTTGACTTTTGACATTGCAATGAACTTCCTTTTTTTTATTTTAATATTGTCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGTCTGAACCTTCTTTGCCACTGTCTGTACAAGCAACTAGCATCACTGCATCAGTAGAAGTAGTAACTGTTAGTAGTATTTTGCAAAAGAATTTCTGAGCTTGGCTGCATCTGGAACAAGGGATTAATCAGGACATGTTGCAGATTATGGTGTATAGTTCTCCTGGTAGTAAAGTCACATTGATTGATCGATACACTCACACTGAACTCTGTTACTAGTATGTCGGTTTTGCTACAGCACCTGGTACCACGTTAATCTGTTCATTTTTTTCAGTACACTGTTTCAGTTCATCATTTAGTTCTATTAACCAGTAGTAACATACTGCCCTTCTACCTGTCTTTTCTCCATTTTCATATATACCTTTGACTGAATTCTGATTCTATTTCTGAAAAAGAAAAAAGATAAAAGTCAGATTGAGTTACATGCACCGACCAGTACAATAGCTCGAACACCGAGAAGCAAATCCTCTGACTTAACTACACATGCATACACATACAATTGAGTCACTGACATGTGAGTTCCACTTTGATATGCCGTTAAGTCAGAGGATCTCTTTCAGCTCGAACTGGAGCTTGAATATGTGCTAACACTGGTGGTTGATGATGCAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCTCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008423