BGIOSGA008433

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Revision as of 03:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008433| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008433, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008433

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008433, complete gene.

LocusTag

OSJNBB0038F20.17

Ensembl Transcript ID

BGIOSGA008433-TA

Ensembl Protein ID

BGIOSGA008433-PA

Length

3274

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22838186..22841459

Sequence Coding Region

22838186..22838997,22839428..22841459

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22838186..22841459 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22838186..22841459 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGTGCTACTTTTGGTGCAATGGACTCTGTCCTCAGCAAGCTCACCAACTTGCTGACCTTCGAATACAAGTTGCTTGAGGAAGTGAAACGAGACATTGTTTTCGTGAAATCTGAGCTAGAGAGCATGCATGCTTTCCTAAAGAAGATGTCTGAAGTTGAGGATGAGCTTGATGAGCAGGTGAAGTGCTGGAGGAAGGAGGTTCGGGAACTGTCCTATGATATAGAAGACCACATCGACGAGTTTGCGGTCCACCTCAAAGATGAGCCCGGATGTGAGCTGCATGGCATCCCAAGTTTCATAAGTCAAATTGTCAAATCGATCGCGTCAATCAGGAATCACTACCAAATTGCCAAGGAGATGCGAGGCATAAGAGCCTTTGTTGGGGAGGCTAGCAGGAGGCATAAGAGATACAAGGTTGATGATACTATCTCCAAACCTAGCAAGGTGACTGTTGACCCTCGCTTGCCTGCTCTGTATAAAGATGCATCTGATCTTGTAGGCATTGATGGGCCAAAAATTGAGCTCATCAGGTGGCTAACAGAGGGCGTGAGTGGCCCTGAACAGCAACTGAAGGTGGTTCCCATTGTTGGATCTGGAGGATTGGGCAAGACAACTCTTGCTAACCAGGTGTACCACAATCTTGAGGGGATATTTGAGAGCCGAGCTTTTGTCACTGTTTCTCAAAAGCCTGACATGATGAAGATTTTAAGAGAGATACTTTCTGGAATTGGGTACAATGGTCTCGAAGCTGCATGGGATGAGGGTAAACTCATTCATGAAGTCAGAAAATACCTTAGGTTTGTCAGGTATTGTGTTGTTCTTGATGATATATGGAGTATTTCTGTGTGGGAAATATTGAGGTGTGCTTTACCTGAGAACAATCGTGGTAGTAGAATAGTAGTTACCACACGTATTACTGACATAGCTAGAGCATGTTGTGCACCACGTCATTGTGATATCTATCATCTTAAACCCCTTGATAATACCTCCTCTCGAAGGTTATTTTTTAAAAGGATATGTGGTTCAGAGGATAGTTTGCCAAGTCATGTAAAGGGGGTAGCTGAGAAGATTTTGAAAAAGTGTGGCGGTATGCCATTAGCTATAATCAGTATAGCTTCTTTGTTGGCTACTAAAGCACAGACAAAGGAACAGTGGGAGAGTGTAAATATCTCTCTGGAATCTGGACTAGACAAGCACATTGGTTTTGAAGGAATGAACTGGATATTATCACTCAGCTACAACCATCTCCCACAACACCTAAAAACTTGCATGCTGTACTTATGTTTGTTTCCAGAAGACTACATTATTTCAAAAGATATACTGGTGCAGCAATGGATAGCTGAAGGATTTGTTTTTCCTGAACATGGACGGAATTTAGAAGAAGCAGGGTATTATTACTTTAACGAGCTCATCAACAGAAGCATGGCCCAGCCAGTAGATATTGAGTACAATGGTGAAGCAATGTCTTGTCGGGTCCATGACATGATTCGTAGTCTCATAATATCGAAGTCAAATCAAGAAAACTTTGTTACCATATTTTCCACATCAGAGGCTGCATCTGTCATGACACCAGGGAAGATTCGTCGGTTGTCTGTTCAGTACATCGATGAAGAATGTGGCATGGTTCCAATGCTGCCAACTCTATCACATGCCCGCTCATTTAGTATTTTTGGACATTGTAATAAAATGCCTTCTCTCACAGAGTTCAAAGTTTTGCGAGTGTTGGAGATGGACGATTGCTGGAAACTGGAGAACCATCATCTTAAGCATATTGGGAGGCTATCTCAGTTGAAATACTTGGGACTTAGAAGAACTCCTATCAGTGAGCTCCCTGAACAGATTGGAGAACTTAAATATTTGGAGACATTAGACTTAAGGTTAAGCCATTTAACAGAATTACCAGCAGCTGTTGTTCGACTTCGACGGTTGGTACACCTGTTTTTCGATTCTAACATCAAATTGCCAGATGGAATTGGAGAGATGCAATCTTTGCAACAACTGTCATCTTTTGATGTTTGTCGGAGTTCAATTACCTCGCTACAAGAGCTCAGTAGACTATCCAATCTAAGGGTACTAGTGATGTCTTGGAGATCCTTTGGTATGATTGGTGATGTCAGAAGCTACAACAACAATCTGGTCTCATCTCTTGGTAGGTTGGGAACATGTAGTCTCCGGTCCATATACATTCAAGGTTACAACAGTTCTCTGCAAGATTTCTCACTGGATTTATGGTGTCCTCCTCCATCTCTCCTGCAAAAATTTGTTGCCAACAAGTGTCTCAGTGTGATTCCAAACTGGTTGGGCTCACTTATCAACCTATCTTACATCAACGTCGATGTTCTTCGAGCGGCACAAAGAGATCTGGATATCCTTGGTGAGCTACCTAACCTTCTCTTTCTCAGGCTAGGCTCAGAAACAGCTCCACAAGAAAGACTCATCATCCGCGACCAGTGTTTCGAACACTTAAAGGAATTCAAATTTATTTGTTTGCTCACAGAGGGACTGGAATTTCAAGTGGGCGCTATGCCAAGGCTTGAAAGACTTTGCTTTCAGTTTGTAGCATTGGAAATCATTTATGCAACTGGTGGTTTTGATTTTGGTATCCAACACCTGTTGTCCCTCAAGGAAGCTTTTGTCAAGATAGACTGTTTTGCTGCTTGGGCTGGAGTAGGAAATGCTGCTGAGGCGGCGATCAGAAATTCAGCAAGAGCACTACCAAACAATCCCTTGCTGAACATTGAGAGATTCAGTGCCAATGATGATGACATGGAGGAAGATTTTGGTTTTGTTGTTCTTGGGCGGCGGATGCAGCAAAGAATGCCCCAACCAGAGACATGA</cdnaseq>

Protein Sequence

<aaseq>MASATFGAMDSVLSKLTNLLTFEYKLLEEVKRDIVFVKSELESMHAFLKKMSEVEDELDEQVKCWRKEVRELSYDIEDHIDEFAVHLKDEPGCELHGIPSFISQIVKSIASIRNHYQIAKEMRGIRAFVGEASRRHKRYKVDDTISKPSKVTVDPRLPALYKDASDLVGIDGPKIELIRWLTEGVSGPEQQLKVVPIVGSGGLGKTTLANQVYHNLEGIFESRAFVTVSQKPDMMKILREILSGIGYNGLEAAWDEGKLIHEVRKYLRFVRYCVVLDDIWSISVWEILRCALPENNRGSRIVVTTRITDIARACCAPRHCDIYHLKPLDNTSSRRLFFKRICGSEDSLPSHVKGVAEKILKKCGGMPLAIISIASLLATKAQTKEQWESVNISLESGLDKHIGFEGMNWILSLSYNHLPQHLKTCMLYLCLFPEDYIISKDILVQQWIAEGFVFPEHGRNLEEAGYYYFNELINRSMAQPVDIEYNGEAMSCRVHDMIRSLIISKSNQENFVTIFSTSEAASVMTPGKIRRLSVQYIDEECGMVPMLPTLSHARSFSIFGHCNKMPSLTEFKVLRVLEMDDCWKLENHHLKHIGRLSQLKYLGLRRTPISELPEQIGELKYLETLDLRLSHLTELPAAVVRLRRLVHLFFDSNIKLPDGIGEMQSLQQLSSFDVCRSSITSLQELSRLSNLRVLVMSWRSFGMIGDVRSYNNNLVSSLGRLGTCSLRSIYIQGYNSSLQDFSLDLWCPPPSLLQKFVANKCLSVIPNWLGSLINLSYINVDVLRAAQRDLDILGELPNLLFLRLGSETAPQERLIIRDQCFEHLKEFKFICLLTEGLEFQVGAMPRLERLCFQFVALEIIYATGGFDFGIQHLLSLKEAFVKIDCFAAWAGVGNAAEAAIRNSARALPNNPLLNIERFSANDDDMEEDFGFVVLGRRMQQRMPQPET</aaseq>

Gene Sequence

<dnaseqindica>1..812#1243..3274#ATGGCTAGTGCTACTTTTGGTGCAATGGACTCTGTCCTCAGCAAGCTCACCAACTTGCTGACCTTCGAATACAAGTTGCTTGAGGAAGTGAAACGAGACATTGTTTTCGTGAAATCTGAGCTAGAGAGCATGCATGCTTTCCTAAAGAAGATGTCTGAAGTTGAGGATGAGCTTGATGAGCAGGTGAAGTGCTGGAGGAAGGAGGTTCGGGAACTGTCCTATGATATAGAAGACCACATCGACGAGTTTGCGGTCCACCTCAAAGATGAGCCCGGATGTGAGCTGCATGGCATCCCAAGTTTCATAAGTCAAATTGTCAAATCGATCGCGTCAATCAGGAATCACTACCAAATTGCCAAGGAGATGCGAGGCATAAGAGCCTTTGTTGGGGAGGCTAGCAGGAGGCATAAGAGATACAAGGTTGATGATACTATCTCCAAACCTAGCAAGGTGACTGTTGACCCTCGCTTGCCTGCTCTGTATAAAGATGCATCTGATCTTGTAGGCATTGATGGGCCAAAAATTGAGCTCATCAGGTGGCTAACAGAGGGCGTGAGTGGCCCTGAACAGCAACTGAAGGTGGTTCCCATTGTTGGATCTGGAGGATTGGGCAAGACAACTCTTGCTAACCAGGTGTACCACAATCTTGAGGGGATATTTGAGAGCCGAGCTTTTGTCACTGTTTCTCAAAAGCCTGACATGATGAAGATTTTAAGAGAGATACTTTCTGGAATTGGGTACAATGGTCTCGAAGCTGCATGGGATGAGGGTAAACTCATTCATGAAGTCAGAAAATACCTTAGGTTTGTCAGGTATGTATATCCATTCTAGTTGTATTCAAAAGTCAAAACTCAAGTTAACACATTAGTTTAAAGCACTCACAATGAAGTTAGCTTGCAACATATGGTTGAAGAGATAATATCCGCCAAAAAAAGGTTCATTGCATCATACACCTTGACGTAGGGGGACTAGTCTGTTCCTTTGTATAATAATTCATCTTTCGCTTTGGAGGTTTGAAATCTTGATAATAACTTCAAAAATGACTAGCTTTTCATTATTTCATCCAGATATCTTATTTGGATTGAATAAAATTTAGTGTGATCTTTCAACTAGTTTGGATGTGATGTTCTTGGTTGTTACTGTCTAACACCCTTATTGGTTATGTGCCACTTCAATATTTTTTTTTAATCTTTGTTACTCTGTTACCAATTATTTCACCCTTGACAATGTTTTGCTTGGCAGGTATTGTGTTGTTCTTGATGATATATGGAGTATTTCTGTGTGGGAAATATTGAGGTGTGCTTTACCTGAGAACAATCGTGGTAGTAGAATAGTAGTTACCACACGTATTACTGACATAGCTAGAGCATGTTGTGCACCACGTCATTGTGATATCTATCATCTTAAACCCCTTGATAATACCTCCTCTCGAAGGTTATTTTTTAAAAGGATATGTGGTTCAGAGGATAGTTTGCCAAGTCATGTAAAGGGGGTAGCTGAGAAGATTTTGAAAAAGTGTGGCGGTATGCCATTAGCTATAATCAGTATAGCTTCTTTGTTGGCTACTAAAGCACAGACAAAGGAACAGTGGGAGAGTGTAAATATCTCTCTGGAATCTGGACTAGACAAGCACATTGGTTTTGAAGGAATGAACTGGATATTATCACTCAGCTACAACCATCTCCCACAACACCTAAAAACTTGCATGCTGTACTTATGTTTGTTTCCAGAAGACTACATTATTTCAAAAGATATACTGGTGCAGCAATGGATAGCTGAAGGATTTGTTTTTCCTGAACATGGACGGAATTTAGAAGAAGCAGGGTATTATTACTTTAACGAGCTCATCAACAGAAGCATGGCCCAGCCAGTAGATATTGAGTACAATGGTGAAGCAATGTCTTGTCGGGTCCATGACATGATTCGTAGTCTCATAATATCGAAGTCAAATCAAGAAAACTTTGTTACCATATTTTCCACATCAGAGGCTGCATCTGTCATGACACCAGGGAAGATTCGTCGGTTGTCTGTTCAGTACATCGATGAAGAATGTGGCATGGTTCCAATGCTGCCAACTCTATCACATGCCCGCTCATTTAGTATTTTTGGACATTGTAATAAAATGCCTTCTCTCACAGAGTTCAAAGTTTTGCGAGTGTTGGAGATGGACGATTGCTGGAAACTGGAGAACCATCATCTTAAGCATATTGGGAGGCTATCTCAGTTGAAATACTTGGGACTTAGAAGAACTCCTATCAGTGAGCTCCCTGAACAGATTGGAGAACTTAAATATTTGGAGACATTAGACTTAAGGTTAAGCCATTTAACAGAATTACCAGCAGCTGTTGTTCGACTTCGACGGTTGGTACACCTGTTTTTCGATTCTAACATCAAATTGCCAGATGGAATTGGAGAGATGCAATCTTTGCAACAACTGTCATCTTTTGATGTTTGTCGGAGTTCAATTACCTCGCTACAAGAGCTCAGTAGACTATCCAATCTAAGGGTACTAGTGATGTCTTGGAGATCCTTTGGTATGATTGGTGATGTCAGAAGCTACAACAACAATCTGGTCTCATCTCTTGGTAGGTTGGGAACATGTAGTCTCCGGTCCATATACATTCAAGGTTACAACAGTTCTCTGCAAGATTTCTCACTGGATTTATGGTGTCCTCCTCCATCTCTCCTGCAAAAATTTGTTGCCAACAAGTGTCTCAGTGTGATTCCAAACTGGTTGGGCTCACTTATCAACCTATCTTACATCAACGTCGATGTTCTTCGAGCGGCACAAAGAGATCTGGATATCCTTGGTGAGCTACCTAACCTTCTCTTTCTCAGGCTAGGCTCAGAAACAGCTCCACAAGAAAGACTCATCATCCGCGACCAGTGTTTCGAACACTTAAAGGAATTCAAATTTATTTGTTTGCTCACAGAGGGACTGGAATTTCAAGTGGGCGCTATGCCAAGGCTTGAAAGACTTTGCTTTCAGTTTGTAGCATTGGAAATCATTTATGCAACTGGTGGTTTTGATTTTGGTATCCAACACCTGTTGTCCCTCAAGGAAGCTTTTGTCAAGATAGACTGTTTTGCTGCTTGGGCTGGAGTAGGAAATGCTGCTGAGGCGGCGATCAGAAATTCAGCAAGAGCACTACCAAACAATCCCTTGCTGAACATTGAGAGATTCAGTGCCAATGATGATGACATGGAGGAAGATTTTGGTTTTGTTGTTCTTGGGCGGCGGATGCAGCAAAGAATGCCCCAACCAGAGACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008433