Os12g0586300

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0586300| Description = Similar to Transfactor-like protein| Version = NM_001073688.1 GI:115489337 GeneID:4352661| Length = 2396 bp| Defini...")
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Gene Name

Os12g0586300

Description

Similar to Transfactor-like protein

Version

NM_001073688.1 GI:115489337 GeneID:4352661

Length

2396 bp

Definition

Oryza sativa Japonica Group Os12g0586300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24678810..24681205

Sequence Coding Region

24678810..24679071,24679166..24679440,24680202..24680478,24680713..24680789,24680909..24681205

Expression

GEO Profiles:Os12g0586300

Genome Context

<gbrowseImage1> name=NC_008405:24678810..24681205 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24678810..24681205 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtcgtcgtcggcgtcggcggcgcagcacgaggaggcggcggcggcggcggccttcgtcctcggcggcgtcgacatgcggatgctggcggcgaggacggcgacgggcgcgctggcgagggcgggcggcggcgaggcggcggcggcggcggcggcggcggcgaggttcgaggattgcatccggagcctcgaggccgagaaggccaagatggaggtgttccgccgcgagctccccatcagcgtccacctcatcgccgacgtgatcgagtggctcaaggacgaggtggagaagcagcggctgctacggcggcggcaggtggaggctccggcggcggcgccgccaccggagatgttcgcgccgccggcgacggcgaagaggaagtcggcggcgtcggcggcggcggagggggtgaaggcggaggcggacgcgaacgacaagcggagctggatgagctcggcgcagctgtggagctgcgggagccacacaagcaccagcaccagcaatggcggcagcgtcaagaagcagcagcacaaggtgtccaatgcgttcatgccactggccaccttgccggcgtttgcaaaatcactggagaaagccgacgccgccgtgccagacctgtccctctcctcccgggtggcgatggccgacgccccggcatgtccggcggcgccgagcgccaccagcagcgccgtcacggatgtcgctgtagcgcagcggcagcaggcggtgcaacggaaggccagacggtgctggtctccggagctccaccgccggttcgtcgccgcgctccagcgcctcggtggcccacaagctgcaactcccaagcagattagggagctgatgaaggttgatggcctcactaatgatgaagtcaaaagccacctgcagaagtaccggctgcacacgcggcgggcatccgacggcggtgatggtggcggtgaccatcagacggttggcggccgtctatggccgctgccaccggagcaatacaccacctcgcagcacagcacatcgcagtctggctcgccgcagggccccctccagctcaccgtgtcgtcgagccacgccgtgtcagtgaccgccggcgatagctgcgacggcggtgaggaggaagaggaggacgggaagtcggggagctatagctgggagatgcagaatggggcaagggcatcatcatcatcttga</cdnaseq>

Protein Sequence

<aaseq>MGSSSASAAQHEEAAAAAAFVLGGVDMRMLAARTATGALARAGG GEAAAAAAAAARFEDCIRSLEAEKAKMEVFRRELPISVHLIADVIEWLKDEVEKQRLL RRRQVEAPAAAPPPEMFAPPATAKRKSAASAAAEGVKAEADANDKRSWMSSAQLWSCG SHTSTSTSNGGSVKKQQHKVSNAFMPLATLPAFAKSLEKADAAVPDLSLSSRVAMADA PACPAAPSATSSAVTDVAVAQRQQAVQRKARRCWSPELHRRFVAALQRLGGPQAATPK QIRELMKVDGLTNDEVKSHLQKYRLHTRRASDGGDGGGDHQTVGGRLWPLPPEQYTTS QHSTSQSGSPQGPLQLTVSSSHAVSVTAGDSCDGGEEEEEDGKSGSYSWEMQNGARAS SSS</aaseq>

Gene Sequence

<dnaseqindica>1..262#357..631#1393..1669#1904..1980#2100..2396#atggggtcgtcgtcggcgtcggcggcgcagcacgaggaggcggcggcggcggcggccttcgtcctcggcggcgtcgacatgcggatgctggcggcgaggacggcgacgggcgcgctggcgagggcgggcggcggcgaggcggcggcggcggcggcggcggcggcgaggttcgaggattgcatccggagcctcgaggccgagaaggccaagatggaggtgttccgccgcgagctccccatcagcgtccacctcatcgccgacggtgagctctacctccaccctctacctgctcgatcactcgatctgcctatagatttcatggatgattattcgctgagatcttcttgggcgtccagtgatcgagtggctcaaggacgaggtggagaagcagcggctgctacggcggcggcaggtggaggctccggcggcggcgccgccaccggagatgttcgcgccgccggcgacggcgaagaggaagtcggcggcgtcggcggcggcggagggggtgaaggcggaggcggacgcgaacgacaagcggagctggatgagctcggcgcagctgtggagctgcgggagccacacaagcaccagcaccagcaatggcggcagcgtcaagaagcagcagcacaaggtatttttgtttggttaagttttgtagtttttttttttataaaacaaatcaagtttatactagtttgaagggaagatatgggaaaaacatgaatattttgtttggttaagttttgtcaagtttgtcctagtttgaagggagattgttttggaagggaagagaaggagtaatgctactcctactagattttttttgaagaaacttaatttgcaaatttatgcgatactactactactagtctagtgctactaaaaaaaatggagaaaattgtaatattgggactgcaaacacgtgggcttcgctgttttgacactccgagtggatgacaaatgggtccatctgtgtgtatgaaatgtgggtccagtgtcattatagcaaagtttaatgtttgccgtgttataattgcaaatccccaaaaaaaaaaaataggaatctttacaattcaggtgttcaatgaaaaattctctctctttttttggtttctactagaaagaggagaaactttttccccatatcaccatgtagaatagaaatggaaaaatacagaataaaacaaaaaaaaaacaaagattcattttgttcgatttcttgtaatttgtcaattttttctatgttattccaccaagaaaatattaacacatgttgagcatgcatagctttgttgtcaatctcatgcatatttgtctgtattttcgctaacttttttctcaaaagagtatattttttcctaactagttctgtcaatttcaaatcatgatcaggtgtccaatgcgttcatgccactggccaccttgccggcgtttgcaaaatcactggagaaagccgacgccgccgtgccagacctgtccctctcctcccgggtggcgatggccgacgccccggcatgtccggcggcgccgagcgccaccagcagcgccgtcacggatgtcgctgtagcgcagcggcagcaggcggtgcaacggaaggccagacggtgctggtctccggagctccaccgccggttcgtcgccgcgctccagcgcctcggtggcccacaaggtgaggatcatctcattctcatcaacctaaattgtgcaaattgccacattttattttagattcgatttttttttccaatgataattttagatgattgtattttctttctgaactgtttagatgattgagtgataatttgtggtcacattgttgattgctcctagtaaaattgtttgattaattttttgattggtgcgctgaaacttgcttaatgtttttttattgttgatgcagctgcaactcccaagcagattagggagctgatgaaggttgatggcctcactaatgatgaagtcaaaagccacctgcaggtttgttcagtctcaactccttacttttacaacctaaaaaatattgccatatgtcggtggcaacaatttggtacgcctcttttataaaaagttcacgaacctcaaagcaaattgtgcagaagtaccggctgcacacgcggcgggcatccgacggcggtgatggtggcggtgaccatcagacggttggcggccgtctatggccgctgccaccggagcaatacaccacctcgcagcacagcacatcgcagtctggctcgccgcagggccccctccagctcaccgtgtcgtcgagccacgccgtgtcagtgaccgccggcgatagctgcgacggcggtgaggaggaagaggaggacgggaagtcggggagctatagctgggagatgcagaatggggcaagggcatcatcatcatcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0586300, RefSeq:Os12g0586300