BGIOSGA008468

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Revision as of 03:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008468| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008468, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008468

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008468, complete gene.

LocusTag

OSJNBA0008E01.28

Ensembl Transcript ID

BGIOSGA008468-TA

Ensembl Protein ID

BGIOSGA008468-PA

Length

2877

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23502957..23505833

Sequence Coding Region

23502957..23503898,23505210..23505833

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23502957..23505833 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23502957..23505833 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACAAGCTGATACTGGCTCTGTGCCTATCAGCGCTGTTCGTCGTCGTCCTCTCCAAGCTGGTATCATCTGCCGTGAAGCCAAGGCTCAACCTTCCGCCGGGGCCATGGACGCTGCCGCTGATCGGCAGCCTCCACCACCTCGCGATGACGAAGAGCCCCCAGACCCACCGCTCGTTGCGCGCGCTGTCGGAGAAGCACGGGCCCATCATGCAGCTGTGGATGGGCGAGGTCCCCGCGGTGGTCGTGTCGTCGCCGGCGGTGGCGGAGGAGGTCCTGAAGAACCAGGACCTCAGGTTCGCCGACCGCCACCTCACCGCCACCACCGAGGAGATCTTCTTCGGCGGCCGCGACGTCATATTCGGGCCGTACGGCGAGCGGTGGCGCCACCTCCGCAAGATCTGCATGCAGGAGCTGCTCACCGCCGCCCGGGTGAGGTCGTTCCGGGGCGTCCGCGAGGGCGAGGTGGCGCGGCTCGTGCGTGAGCTGGCCGCGTCCGCCGCCGGCGCGGGCGCGGGCGCGGTGGGCGCCGCCGCTGGCGTGAACCTCAACGAGAGGATCAGCAAGCTCGCCAACGACATCGTGATGGTGAGCTCCGTCGGCGGCCGGTGCAGCCACCGCGACGAGTTCATGGAGGCGCTCGAGGTCGCCAAGAAGCAGATCACGTGGCTCAGCGTCGCCGACCTGTTCCCGTCGTCCAAGCTCGCGCGGATGGTGGCGGTGGCGCCACGCAAGGGCCTCGCCAGCCGCAAGAGGATGGAGCTCGTCATAAGACGGATCATCCAAGAACGGAAGGACCAGCTGATGGACGACAGCGCCGCCGGCGCCGGCGAGGCTGCGGCGGGGAAAGACTGCTTCCTCGACGTCCTGCTTCGGCTGCAGAAGGAAGGTGGCACGCCGGTCCCAGTTACCGACGAAATCATAGTCGTGCTTCTGTTTGACATGATTTCAGGGGCCAGTGAGACATCGCCGACAGTGCTGATTTGGACCTTGGCGGAACTCATGCGGAATCCAAGAATAATGGCAAAGGCACAAGCTGAGGTAAGACAAGCTGTTGCTGGGAAGACCACCATCACGGAGGATGATATTGTTGGGTTGAGCTACCTTAAGATGGTGATTAAGGAGACTTTGCGACTCCATCCCCCAGCGCCGTTGTTGAACCCTCGTAAATGCCGTGAGACAAGCCAAGTCATGGGCTACGATATACCAAAGGGAACATCTGTGTTCGTAAATATGTGGGCGATATGTAGAGACTCCAGGTACTGGGAGGATCCTGAGGAGTATAAACCAGAGAGATTCGAAAATAATAGTGTAGATTATAAAGGGAATAACTTCGAATTTCTTCCATTTGGCTCTGGTCGTAGAATTTGTCCAGGTATAAACCTTGGGGTGGCCAACTTGGAGCTACCATTAGCTAGTCTTCTTTATCATTTTGACTGGAAGCTACCCAATGGAATGGCGCCTAAGGACCTTGATATGCATGAGACGTCTGGAATGGTTGCAGCTAAACTCATTACCCTAAATATATGCCCTATTACTCATATTGCTCCAAGTAGTGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MEDKLILALCLSALFVVVLSKLVSSAVKPRLNLPPGPWTLPLIGSLHHLAMTKSPQTHRSLRALSEKHGPIMQLWMGEVPAVVVSSPAVAEEVLKNQDLRFADRHLTATTEEIFFGGRDVIFGPYGERWRHLRKICMQELLTAARVRSFRGVREGEVARLVRELAASAAGAGAGAVGAAAGVNLNERISKLANDIVMVSSVGGRCSHRDEFMEALEVAKKQITWLSVADLFPSSKLARMVAVAPRKGLASRKRMELVIRRIIQERKDQLMDDSAAGAGEAAAGKDCFLDVLLRLQKEGGTPVPVTDEIIVVLLFDMISGASETSPTVLIWTLAELMRNPRIMAKAQAEVRQAVAGKTTITEDDIVGLSYLKMVIKETLRLHPPAPLLNPRKCRETSQVMGYDIPKGTSVFVNMWAICRDSRYWEDPEEYKPERFENNSVDYKGNNFEFLPFGSGRRICPGINLGVANLELPLASLLYHFDWKLPNGMAPKDLDMHETSGMVAAKLITLNICPITHIAPSSA</aaseq>

Gene Sequence

<dnaseqindica>1..942#2254..2877#ATGGAGGACAAGCTGATACTGGCTCTGTGCCTATCAGCGCTGTTCGTCGTCGTCCTCTCCAAGCTGGTATCATCTGCCGTGAAGCCAAGGCTCAACCTTCCGCCGGGGCCATGGACGCTGCCGCTGATCGGCAGCCTCCACCACCTCGCGATGACGAAGAGCCCCCAGACCCACCGCTCGTTGCGCGCGCTGTCGGAGAAGCACGGGCCCATCATGCAGCTGTGGATGGGCGAGGTCCCCGCGGTGGTCGTGTCGTCGCCGGCGGTGGCGGAGGAGGTCCTGAAGAACCAGGACCTCAGGTTCGCCGACCGCCACCTCACCGCCACCACCGAGGAGATCTTCTTCGGCGGCCGCGACGTCATATTCGGGCCGTACGGCGAGCGGTGGCGCCACCTCCGCAAGATCTGCATGCAGGAGCTGCTCACCGCCGCCCGGGTGAGGTCGTTCCGGGGCGTCCGCGAGGGCGAGGTGGCGCGGCTCGTGCGTGAGCTGGCCGCGTCCGCCGCCGGCGCGGGCGCGGGCGCGGTGGGCGCCGCCGCTGGCGTGAACCTCAACGAGAGGATCAGCAAGCTCGCCAACGACATCGTGATGGTGAGCTCCGTCGGCGGCCGGTGCAGCCACCGCGACGAGTTCATGGAGGCGCTCGAGGTCGCCAAGAAGCAGATCACGTGGCTCAGCGTCGCCGACCTGTTCCCGTCGTCCAAGCTCGCGCGGATGGTGGCGGTGGCGCCACGCAAGGGCCTCGCCAGCCGCAAGAGGATGGAGCTCGTCATAAGACGGATCATCCAAGAACGGAAGGACCAGCTGATGGACGACAGCGCCGCCGGCGCCGGCGAGGCTGCGGCGGGGAAAGACTGCTTCCTCGACGTCCTGCTTCGGCTGCAGAAGGAAGGTGGCACGCCGGTCCCAGTTACCGACGAAATCATAGTCGTGCTTCTGTTTGTAAGTGTCACACTCACACTATATACCTATTTCCTCTTTATATACTCCCTCCGTCCAAAAAAAAAAAAGACAAACCCTAGATTTCCGTGTCCAACGTTTGACTGTTCATTTTATATGATTTTTTTTATAATTAGTATTTTTATTGTTGTTAGATGATTAAAACATGATTAATACTTTATGCGTGACTTATCTTTTTAATTTTTTTCATAATTTTTTTAAATAAAACGGACGGTTAAACGTTGAACATAGAAACCCAAGGTTTGTCTTTTTTTTTTTGGACGGAGGGAGTACAAACTAGCACAGTTTTACTCCCCCATCTATCCCAAAATATAGTAATATATATTACTACCTTCATTTCATATCATAAATCGTTGACCTTTTTCTTAGCTAATTTTTTTACCAAGTTTATTGAAAAAAAACAGCAATATTTTCGACACAAAATAAACATATTACCAAAATTAACAAAATATATGAAATGTTAATTTGAATGAAACTAATTTCATTTTGCAGATGTTGCTAAATTTTTTATAAACTTAGCCAAACCTAAAGAAGTTTAATTAAGAAAAGAAAAAGTCAAAATGACTTAAAATATGAAATAGAGAGTAGTATTTTCTCCGTTTCATATTATAAGTTTGACTTTTTTTATTAGTCAAAATTCTTTAGGTTTGACCAAGTTTGTAGAAAAAATTAGCAACATCTACGATATAAGATTAGTTTTATTAAATTTGACATTGAATATATTTTGATAATATGTTTAACTTGTATTGAAAATATTAGTATATTTACCACAAACTTTTTTAAACTTAAAGTTTGACTAAGAAAAAAATCAAATGATTTATAATATAAAACGGAGGGAGTAGTATCTAGACAACTTCTAATTTAGCATTAGGTTGCTGCATATATATGAACGGAGCGAGTATTTCTTAGCTGCATGAGTTTTTTCTCTTATTTGTTGGTCTTCTAAGTTCTAAACTTGAGTAACATATATGTATGCGTGTGTGTATATATATTCTAGGACATGGATGACTATTCATAAAGTAATTTATTTATATTTTACTTTTTTATACGTAATTTTTCAACACCTAAAAATATCAGTTCAATATATCATATAGATTATCAACAAAATAAATTTATTTTTGGTTAACCTTACAAATTCAGAAAAAAATAAAAATTACTACAGAGATCCGCTAACTTTCATGCAAATTAGCACTGAAGTTTAAGTCAATGCGTTCTGTAAATTTAGTTACATATTGTGCAAGTTTATATGATAGAAGTCATACAACTGACGAGAAAAGCAAATACCATTTTTAGGACATGATTTCAGGGGCCAGTGAGACATCGCCGACAGTGCTGATTTGGACCTTGGCGGAACTCATGCGGAATCCAAGAATAATGGCAAAGGCACAAGCTGAGGTAAGACAAGCTGTTGCTGGGAAGACCACCATCACGGAGGATGATATTGTTGGGTTGAGCTACCTTAAGATGGTGATTAAGGAGACTTTGCGACTCCATCCCCCAGCGCCGTTGTTGAACCCTCGTAAATGCCGTGAGACAAGCCAAGTCATGGGCTACGATATACCAAAGGGAACATCTGTGTTCGTAAATATGTGGGCGATATGTAGAGACTCCAGGTACTGGGAGGATCCTGAGGAGTATAAACCAGAGAGATTCGAAAATAATAGTGTAGATTATAAAGGGAATAACTTCGAATTTCTTCCATTTGGCTCTGGTCGTAGAATTTGTCCAGGTATAAACCTTGGGGTGGCCAACTTGGAGCTACCATTAGCTAGTCTTCTTTATCATTTTGACTGGAAGCTACCCAATGGAATGGCGCCTAAGGACCTTGATATGCATGAGACGTCTGGAATGGTTGCAGCTAAACTCATTACCCTAAATATATGCCCTATTACTCATATTGCTCCAAGTAGTGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008468