BGIOSGA008474

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Revision as of 03:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008474| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008474, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008474

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008474, complete gene.

LocusTag

OSJNBB0046L23.10

Ensembl Transcript ID

BGIOSGA008474-TA

Ensembl Protein ID

BGIOSGA008474-PA

Length

2838

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23720916..23723753

Sequence Coding Region

23720916..23721273,23721425..23721451,23721890..23722818,23722908..23723753

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23720916..23723753 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23720916..23723753 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGCGTCGCCGTCGTCGATGAGCGGCGCCGGCGCCGGCGAGGCGGGGGTGCGGACGGTGGTGTGGTTCAGGCGGGACCTGCGCGTGGAGGACAACCCGGCGCTGGCGGCGGCGGCGCGGGCGGCCGGGGAGGTGGTGCCGGTGTACGTGTGGGCGCCGGAGGAGGACGGGCCGTACTACCCGGGGCGGGTGTCCCGGTGGTGGCTCAGCCAGAGCCTCAAGCACCTGGACGCCTCGCTCCGGCGGCTCGGCGCCAGCAGGCTCGTCACCCGCCGCTCCGCCGACGCCGTCGTCGCGCTCATCGAGCTCGTCCGCAGCATCGGCGCCACGCATCTCTTCTTCAACCACCTCTACGGATCCATTGATCCAGAATTCCAGATAGACCCGCTGTCGCTGGTGAGGGACCACCGGGTGAAGGCGCTGCTGACGGCCGAGGGCATCGCCGTGCAGTCGTTCAACGCCGACCTGCTGTACGAGCCATGGGAGGTGGTCGACGACGACGGCTGCCCGTTCACCATGTTCGCGCCGTTCTGGGACAGGTGCCTGTGCATGCCCGACCCGGCGGCGCCGCTGCTGCCGCCCAAGAGGATCGCGCCCGGCGAGCTGCCGGCGAGGAGGTGCCCCTCCGACGAGCTGGTGTTCGAGGACGAGTCCGAGCGGGGGAGCAACGCGCTGCTGGCGAGGGCGTGGTCGCCCGGGTGGCAGAACGCCGACAAGGCGCTGGCCGCGTTCCTCAACGGGCCACTCATGGACTACTCGGTGAACCGGAAGAAGGCCGACAGCGCCAGCACGTCGCTGCTGTCGCCGTACCTGCACTTCGGCGAGCTCAGCGTACGCAAGGTGTTCCACCAGGTGAGGATGAAGCAGCTCATGTGGAGCAACGAGGGGAACCACGCCGGCGACGAGAGTTGCGTCCTCTTCCTCCGGTCCATCGGCCTCAGGGAGTACTCGAGGTACCTCACGTTCAACCACCCGTGCAGCCTGGAGAAGCCACTCCTGGCGCACCTCAGGTTCTTCCCCTGGGTGGTCGACGAGGTGTACTTCAAGGTGTGGAGGCAGGGGAGGACAGGGTACCCTCTCGTCGACGCCGGGATGCGCGAGCTCTGGGCCACCGGCTGGCTGCACGACCGGATACGCGTCGTCGTCTCCAGCTTCTTCGTCAAGGTGCTCCAGCTTCCATGGCGCTGGGGGATGAAGTACTTCTGGGACACCCTGCTCGACGCCGACCTCGAGAGCGACGCGCTCGGCTGGCAGTACATCTCCGGCTCTCTCCCCGATGGCCGTGAGCTCGACCGCATCGACAACCCTCAGCTTGAAGGATACAAGTTTGATCCGCACGGGGAGTATGTCCGGCGATGGCTGCCGGAGCTGGCAAGGCTGCCGACGGAGTGGATACACCACCCATGGGACGCACCGGAGTCGGTGCTCCAGGCTGCAGGGATTGAGCTAGGCTCCAACTATCCTCTCCCCATCGTGGAGCTGGACGCGGCGAAGACCAGGCTGCAGGATGCACTGTCAGAGATGTGGGAGCTCGAGGCCGCGTCACGCGCAGCGATGGAGAACGGAATGGAGGAGGGCCTCGGCGACTCCTCCGATGTGCCGCCGATCGCCTTCCCACCGGAGCTGCAGATGGAAGTTGACCGAGCACCGGCCCAGCCTACTGTTCACGGACCGACAACGGCTGGCCGGCGACGAGAGGATCAGATGGTTCCCAGCATGACCTCCTCGCTGGTCAGAGCTGAAACAGAACTTTCAGCGGATTTTGACAACAGCATGGACAGTAGGCCGGAGGTGCCGTCGCAGGTGCTCTTCCAGCCTCGGATGGAAAGGGAAGAAACAGTGGACGGCGGCGGTGGCGGCGGAATGGTCGGCAGGAGCAACGGCGGCGGCCACCAAGGCCAACACCAGCAGCAACAGCACAACTTTCAGACTACAATTCACCGGGCACGGGGCGTTGCGCCGTCTACGTCAGAGGCATCAAGCAACTGGACTGGGAGAGAAGGCGGCGTGGTGCCCGTCTGGTCGCCTCCGGCAGCGTCAGGCCCCTCAGATCACTACGCTGCCGATGAAGCTGACATTACCAGTAGAAGTTATTTGGACAGGCATCCACAGTCGCATACGTTGATGAACTGGAGTCAGCTCTCGCAGTCATTGTGA</cdnaseq>

Protein Sequence

<aaseq>MSASPSSMSGAGAGEAGVRTVVWFRRDLRVEDNPALAAAARAAGEVVPVYVWAPEEDGPYYPGRVSRWWLSQSLKHLDASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLYGSIDPEFQIDPLSLVRDHRVKALLTAEGIAVQSFNADLLYEPWEVVDDDGCPFTMFAPFWDRCLCMPDPAAPLLPPKRIAPGELPARRCPSDELVFEDESERGSNALLARAWSPGWQNADKALAAFLNGPLMDYSVNRKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGDESCVLFLRSIGLREYSRYLTFNHPCSLEKPLLAHLRFFPWVVDEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDAAKTRLQDALSEMWELEAASRAAMENGMEEGLGDSSDVPPIAFPPELQMEVDRAPAQPTVHGPTTAGRRREDQMVPSMTSSLVRAETELSADFDNSMDSRPEVPSQVLFQPRMEREETVDGGGGGGMVGRSNGGGHQGQHQQQQHNFQTTIHRARGVAPSTSEASSNWTGREGGVVPVWSPPAASGPSDHYAADEADITSRSYLDRHPQSHTLMNWSQLSQSL</aaseq>

Gene Sequence

<dnaseqindica>1..358#510..536#975..1903#1993..2838#ATGTCAGCGTCGCCGTCGTCGATGAGCGGCGCCGGCGCCGGCGAGGCGGGGGTGCGGACGGTGGTGTGGTTCAGGCGGGACCTGCGCGTGGAGGACAACCCGGCGCTGGCGGCGGCGGCGCGGGCGGCCGGGGAGGTGGTGCCGGTGTACGTGTGGGCGCCGGAGGAGGACGGGCCGTACTACCCGGGGCGGGTGTCCCGGTGGTGGCTCAGCCAGAGCCTCAAGCACCTGGACGCCTCGCTCCGGCGGCTCGGCGCCAGCAGGCTCGTCACCCGCCGCTCCGCCGACGCCGTCGTCGCGCTCATCGAGCTCGTCCGCAGCATCGGCGCCACGCATCTCTTCTTCAACCACCTCTACGGTTCGATTCCTATATCTTCTTCTCGCACTGCGACCTCTTCTTGGTCAATTCTTCCTTTTTTTTTTAGGCTCTGCTATTATGATTCAGACTTCAGCTTAGAGTTCCAGTTAAATTTGTTCGATATTTTTCCTTCCCTCTTCTCGTTTAACAGGATCCATTGATCCAGAATTCCAGATAGGTACTATATCTCACAAAGGGAAAAAAAAAAGAGAGACTAGGCTAAGCTTCCACGAACAGCATCTTGTGTGTCTACCATTTATGGATATTTCGCACCTTAACACCCTTACTCTTCACGTCAAAGAGCTCCAAGTATGGAGAGCATCTACCTTAGACTTTCCCATCAAACACTCCCTGAACACTCGGTCACCGTCTCCCTCTTTAATTCCCAAAAGTTCATGCAGCCACCAACCTCCTCACCTCCTCATAGCCTATCCAAGAACTCCATTAAATTTAGCAGTTGGCCAAGGATTCAGGAATGGTGTGTGTGCTCTGGTTTACTGTTTTAGCAACAAGAAGAATGGTTAATTAGTTAAGTGTCCTGGTGAGTGGCTTATCGTCAGAGGGATGACGCGAATGGCCAGGCGCAGCTGACCGATCGCTGTCTTTTGGTGTGCAGACCCGCTGTCGCTGGTGAGGGACCACCGGGTGAAGGCGCTGCTGACGGCCGAGGGCATCGCCGTGCAGTCGTTCAACGCCGACCTGCTGTACGAGCCATGGGAGGTGGTCGACGACGACGGCTGCCCGTTCACCATGTTCGCGCCGTTCTGGGACAGGTGCCTGTGCATGCCCGACCCGGCGGCGCCGCTGCTGCCGCCCAAGAGGATCGCGCCCGGCGAGCTGCCGGCGAGGAGGTGCCCCTCCGACGAGCTGGTGTTCGAGGACGAGTCCGAGCGGGGGAGCAACGCGCTGCTGGCGAGGGCGTGGTCGCCCGGGTGGCAGAACGCCGACAAGGCGCTGGCCGCGTTCCTCAACGGGCCACTCATGGACTACTCGGTGAACCGGAAGAAGGCCGACAGCGCCAGCACGTCGCTGCTGTCGCCGTACCTGCACTTCGGCGAGCTCAGCGTACGCAAGGTGTTCCACCAGGTGAGGATGAAGCAGCTCATGTGGAGCAACGAGGGGAACCACGCCGGCGACGAGAGTTGCGTCCTCTTCCTCCGGTCCATCGGCCTCAGGGAGTACTCGAGGTACCTCACGTTCAACCACCCGTGCAGCCTGGAGAAGCCACTCCTGGCGCACCTCAGGTTCTTCCCCTGGGTGGTCGACGAGGTGTACTTCAAGGTGTGGAGGCAGGGGAGGACAGGGTACCCTCTCGTCGACGCCGGGATGCGCGAGCTCTGGGCCACCGGCTGGCTGCACGACCGGATACGCGTCGTCGTCTCCAGCTTCTTCGTCAAGGTGCTCCAGCTTCCATGGCGCTGGGGGATGAAGTACTTCTGGGACACCCTGCTCGACGCCGACCTCGAGAGCGACGCGCTCGGCTGGCAGTACATCTCCGGCTCTCTCCCCGATGGCCGTGAGCTCGACCGCATCGACAACCCTCAGGTACCCAACTTCTGTTCTCCTCCATGAGATGGGACCATCTTTGTTGCCATTACCATATTGATCTGATGCATTGGTGTTGTGTTTCGCAGCTTGAAGGATACAAGTTTGATCCGCACGGGGAGTATGTCCGGCGATGGCTGCCGGAGCTGGCAAGGCTGCCGACGGAGTGGATACACCACCCATGGGACGCACCGGAGTCGGTGCTCCAGGCTGCAGGGATTGAGCTAGGCTCCAACTATCCTCTCCCCATCGTGGAGCTGGACGCGGCGAAGACCAGGCTGCAGGATGCACTGTCAGAGATGTGGGAGCTCGAGGCCGCGTCACGCGCAGCGATGGAGAACGGAATGGAGGAGGGCCTCGGCGACTCCTCCGATGTGCCGCCGATCGCCTTCCCACCGGAGCTGCAGATGGAAGTTGACCGAGCACCGGCCCAGCCTACTGTTCACGGACCGACAACGGCTGGCCGGCGACGAGAGGATCAGATGGTTCCCAGCATGACCTCCTCGCTGGTCAGAGCTGAAACAGAACTTTCAGCGGATTTTGACAACAGCATGGACAGTAGGCCGGAGGTGCCGTCGCAGGTGCTCTTCCAGCCTCGGATGGAAAGGGAAGAAACAGTGGACGGCGGCGGTGGCGGCGGAATGGTCGGCAGGAGCAACGGCGGCGGCCACCAAGGCCAACACCAGCAGCAACAGCACAACTTTCAGACTACAATTCACCGGGCACGGGGCGTTGCGCCGTCTACGTCAGAGGCATCAAGCAACTGGACTGGGAGAGAAGGCGGCGTGGTGCCCGTCTGGTCGCCTCCGGCAGCGTCAGGCCCCTCAGATCACTACGCTGCCGATGAAGCTGACATTACCAGTAGAAGTTATTTGGACAGGCATCCACAGTCGCATACGTTGATGAACTGGAGTCAGCTCTCGCAGTCATTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008474

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008474&oldid=62026"