BGIOSGA008486

From RiceWiki
Revision as of 03:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008486| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008486, complete gene.| tag = OS02G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008486

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008486, complete gene.

LocusTag

OS02G0577300

Ensembl Transcript ID

BGIOSGA008486-TA

Ensembl Protein ID

BGIOSGA008486-PA

Length

2718

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23950220..23952937

Sequence Coding Region

23950220..23950964,23951036..23951250,23951338..23951619,23951703..23951831,23951921..23952100
,23952381..23952488,23952731..23952937

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23950220..23952937 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23950220..23952937 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGGTGACAAAGCGACTCGGAATTACGGTTCTAATTGTCCTCTTCCCTCTGCTGATTGTGCATCATCTGATAGAGAATAGCCCAGTGTCAGGGCCATCTCGATACCAAGTCATACATTCTAATCTCCTTGGTTGGTTGAGCGACTCATTGGGAAATTCAGTGGCTCAAAATCCAGATAATACACCAGTAGAAGTGATACCAGCAGATGCTTCAGCTTCAAACAGCTCGGATTCTGGAAATTCCTCTCTCGAAGGATTTCAGTGGTTAAATACATGGAATCACATGAAGCAGTTGACCAACATCTCCGATGGCCTTCCTCACGCAAATGAGGCTATAGACAATGCAAGAACTGCATGGGAAAACCTGACGATATCAGTTCACAATTCAACCTCTAAACAGACTGAGAAAGAGAGGCAGTGTCCATATTCTATCCGCAGAATGAATGCCTCCAAGCCAGACACTGGAGATTTTACCATCGATATACCTTGTGGGCTGATTGTAGGTTCTTCAGTAACTATTATAGGCACTCCAGGTAGCCTCTCCGGTAACTTCAGGATTGATCTTGTTGGGACAGAATTGCCAGGGGGATCTGGGAAACCCATCGTACTGCACTATGATGTTCGTCTAACAAGTGATGAACTTACTGGAGGTCCAGTCATAGTGCAGAATGCCTTCACTGCAAGTAATGGCTGGGGTTATGAGGATAGATGTCCCTGCAGTAACTGTAATAATGCAACTCAAGTGGATGATTTGGAGCGATGTAATTCCATGGTGGGTAGAGAAGAGAAGAGAGCTATAAACTCAAAACAGCACCTGAATGCCAAGAAAGATGAACACCCAAGCACATATTTTCCATTTAAGCAGGGACACCTTGCTATCTCAACTCTTCGGATAGGGCTAGAAGGGATTCACATGACAGTTGATGGAAAACATGTTACCTCATTTCCATATAAAGCGGGCTTGGAAGCATGGTTCGTTACTGAAGTAGTAGTATCTGGTGATTTCAAGCTAGTAAGTGCAATTGCAAGTGGCCTGCCCACATCAGAAGACCTGGATAACAGCTTCGATCTTGCAATGTTGAAGTCGTCCCCTATTCCAGAGGGAAAAGATGTGGACCTTTTGATTGGTATCTTTTCAACAGCAAACAACTTCAAGCGAAGGATGGCGATCCGACGGACATGGATGCAATATGATGCGGTGCGCAAAGGAGCAGTAGTGGTCCGTTTTTTCGTTGGCCTGCATACAAACCTCATTGTAAACAAGGAACTCTGGAATGAAGCACGCACATATGGCGACATTCAAGTGCTGCCCTTTGTTGATTACTACAGTCTGATAACATGGAAGACACTGGCAATATGCATCTACGGGACTGGTGCTGTATCAGCGAAATATCTGATGAAAACAGACGATGATGCTTTTGTCCGTGTGGACGAGATACACTCCTCAGTAAAACAACTGAATGTCAGTCACGGGCTACTTTATGGTCGTATCAATTCTGACTCAGGTCCTCACAGAAATCCTGAAAGCAAATGGTACATAAGCCCAGAGGAATGGCCTGAAGAGAAATACCCACCATGGGCACACGGACCAGGATATGTGGTATCACAAGACATTGCAAAGGAAATCAACAGTTGGTATGAAAAAAGCCATTTGAAGATGTTCAAACTAGAAGATGTAGCAATGGGTATATGGATTGATGAAATGAAGAAGGGTGGTTTACCTGTCCAATACAAAACAGATGAAAGAATTAACAGTGATGGCTGCAATGATGGGTGCATAGTTGCTCACTACCAAGAACCAAGGCACATGCTATGCATGTGGGAGAAACTCCTAAGGACAAATCAAGCAACGTGCTGCAACTAA</cdnaseq>

Protein Sequence

<aaseq>MWVTKRLGITVLIVLFPLLIVHHLIENSPVSGPSRYQVIHSNLLGWLSDSLGNSVAQNPDNTPVEVIPADASASNSSDSGNSSLEGFQWLNTWNHMKQLTNISDGLPHANEAIDNARTAWENLTISVHNSTSKQTEKERQCPYSIRRMNASKPDTGDFTIDIPCGLIVGSSVTIIGTPGSLSGNFRIDLVGTELPGGSGKPIVLHYDVRLTSDELTGGPVIVQNAFTASNGWGYEDRCPCSNCNNATQVDDLERCNSMVGREEKRAINSKQHLNAKKDEHPSTYFPFKQGHLAISTLRIGLEGIHMTVDGKHVTSFPYKAGLEAWFVTEVVVSGDFKLVSAIASGLPTSEDLDNSFDLAMLKSSPIPEGKDVDLLIGIFSTANNFKRRMAIRRTWMQYDAVRKGAVVVRFFVGLHTNLIVNKELWNEARTYGDIQVLPFVDYYSLITWKTLAICIYGTGAVSAKYLMKTDDDAFVRVDEIHSSVKQLNVSHGLLYGRINSDSGPHRNPESKWYISPEEWPEEKYPPWAHGPGYVVSQDIAKEINSWYEKSHLKMFKLEDVAMGIWIDEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKLLRTNQATCCN</aaseq>

Gene Sequence

<dnaseqindica>1..745#817..1031#1119..1400#1484..1612#1702..1881#2162..2269#2512..2718#ATGTGGGTGACAAAGCGACTCGGAATTACGGTTCTAATTGTCCTCTTCCCTCTGCTGATTGTGCATCATCTGATAGAGAATAGCCCAGTGTCAGGGCCATCTCGATACCAAGTCATACATTCTAATCTCCTTGGTTGGTTGAGCGACTCATTGGGAAATTCAGTGGCTCAAAATCCAGATAATACACCAGTAGAAGTGATACCAGCAGATGCTTCAGCTTCAAACAGCTCGGATTCTGGAAATTCCTCTCTCGAAGGATTTCAGTGGTTAAATACATGGAATCACATGAAGCAGTTGACCAACATCTCCGATGGCCTTCCTCACGCAAATGAGGCTATAGACAATGCAAGAACTGCATGGGAAAACCTGACGATATCAGTTCACAATTCAACCTCTAAACAGACTGAGAAAGAGAGGCAGTGTCCATATTCTATCCGCAGAATGAATGCCTCCAAGCCAGACACTGGAGATTTTACCATCGATATACCTTGTGGGCTGATTGTAGGTTCTTCAGTAACTATTATAGGCACTCCAGGTAGCCTCTCCGGTAACTTCAGGATTGATCTTGTTGGGACAGAATTGCCAGGGGGATCTGGGAAACCCATCGTACTGCACTATGATGTTCGTCTAACAAGTGATGAACTTACTGGAGGTCCAGTCATAGTGCAGAATGCCTTCACTGCAAGTAATGGCTGGGGTTATGAGGATAGATGTCCCTGCAGTAACTGTAATAATGCAACTCAAGGTACTTCCAAATTGCGTCTTTATTGTTTCTTCTTTTGCCCCGTTACACTAGGCATCTAACATATATCACAGTGGATGATTTGGAGCGATGTAATTCCATGGTGGGTAGAGAAGAGAAGAGAGCTATAAACTCAAAACAGCACCTGAATGCCAAGAAAGATGAACACCCAAGCACATATTTTCCATTTAAGCAGGGACACCTTGCTATCTCAACTCTTCGGATAGGGCTAGAAGGGATTCACATGACAGTTGATGGAAAACATGTTACCTCATTTCCATATAAAGCGGTAACCTTCTATCTGGACCATGATAAGTCTGACATTTACTCAACTCAATTCTTTGATTCCTTACCATATAGATGCTTCTGTTTGTAGGGCTTGGAAGCATGGTTCGTTACTGAAGTAGTAGTATCTGGTGATTTCAAGCTAGTAAGTGCAATTGCAAGTGGCCTGCCCACATCAGAAGACCTGGATAACAGCTTCGATCTTGCAATGTTGAAGTCGTCCCCTATTCCAGAGGGAAAAGATGTGGACCTTTTGATTGGTATCTTTTCAACAGCAAACAACTTCAAGCGAAGGATGGCGATCCGACGGACATGGATGCAATATGATGCGGTGCGCAAAGGAGCAGTAGTGGTCCGTTTTTTCGTTGGCCTGGTAATAAAAAGAAAACAAGAATATGATATGATAGCTCTGTACCATATTCTGACAGTAAATGTATTTTTTATTTGTTTTAAAAGCATACAAACCTCATTGTAAACAAGGAACTCTGGAATGAAGCACGCACATATGGCGACATTCAAGTGCTGCCCTTTGTTGATTACTACAGTCTGATAACATGGAAGACACTGGCAATATGCATCTACGGGGTAAAGTTTCATGTTCTGCCTCTAATTTATTCCCTTCCATTCCGTGTTTGTCTTTGCTTAGCACTTAGCAGTGGTTTTCCCCTGAACAGACTGGTGCTGTATCAGCGAAATATCTGATGAAAACAGACGATGATGCTTTTGTCCGTGTGGACGAGATACACTCCTCAGTAAAACAACTGAATGTCAGTCACGGGCTACTTTATGGTCGTATCAATTCTGACTCAGGTCCTCACAGAAATCCTGAAAGCAAATGGTACATAAGCCCAGAGGTAATGTCTGCACAACAATCAGTTCTCTACAATCAATTTCACAAATCTCTACCTGAAAAACATCAATATTGTAAACCTTTTCAATCTGAACTCACCGTTGAAATCCAATATTCCAAAAAAAATCAAACTACAATCTGTCCGAGGACGTTTATACTAAATAACCAAATCAATTTGCAACCAGTCACCATACTAAGACAAAGGGGATCATAGATGATATTTTTGGATGGTCAAGAAACGCAAGTGCTAAGTTGCTAACTATGAATTATGATTTACTCTGCAGGAATGGCCTGAAGAGAAATACCCACCATGGGCACACGGACCAGGATATGTGGTATCACAAGACATTGCAAAGGAAATCAACAGTTGGTATGAAAAAAGCCATTTGAAGGTATTTGTATTTAGATGTAGACACAAACAGTGGCTCTACACTTACATGCTAAATTTAGCTTGAAAGTTTGCTACAGAAAATGCAGCAAATTCTTTTCTAGTCCAGCATGCAGCACTGCAACTGCAAGCTAATAGAAAATTATTACAATGCCTAAAACCCTAGCTTTTCATTTCCTGATTTTCTCTACTACCAGCAGCAAGATTAGGAAAACTAACCATGTTTGCAACCCCTGATTTATGCAGATGTTCAAACTAGAAGATGTAGCAATGGGTATATGGATTGATGAAATGAAGAAGGGTGGTTTACCTGTCCAATACAAAACAGATGAAAGAATTAACAGTGATGGCTGCAATGATGGGTGCATAGTTGCTCACTACCAAGAACCAAGGCACATGCTATGCATGTGGGAGAAACTCCTAAGGACAAATCAAGCAACGTGCTGCAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008486