BGIOSGA008498

From RiceWiki
Revision as of 03:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008498| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008498, complete gene.| tag = B1267B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008498

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008498, complete gene.

LocusTag

B1267B06.33

Ensembl Transcript ID

BGIOSGA008498-TA

Ensembl Protein ID

BGIOSGA008498-PA

Length

1847

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24096260..24098106

Sequence Coding Region

24096260..24096932,24097045..24097115,24097217..24097783,24097861..24098106

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24096260..24098106 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24096260..24098106 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCTGCGTCGACGACGTCGGCAAGCCGCGGGCGTCGAGGAAGGTGTGCGTGATCGGCGCCGGGATGGCCGGGCTGGCGGCGGCGCGGGAGCTGCGGTGGGAGGGGCACGCCGTGACGGTGCTGGAGCAGGCCGGCGACGTGGGCGGGCAGTGGCTGTACGACGACCCGCGGGCCGACGACGACGACGAAGACCCGCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGAAGCCGGTGAGGGTGCACAGCAGCATGTACGCCTCGCTCCGGCTGCTCGGCCCCCGCGAGGTCATGGGATTCTCCGACTTCCAGTTCGTGCCGGCCAGGAAGAGCCGCTGCGGCGGCGGCGACAACCCCGGCGGCCGCGACCCGCGCCGCTTCCCGGGGCACCGCGAGGTGTACCTCTACCTCAGGGACTTTTACCGCGCGGCGGGGCTCACCGACTCCGTCAGGTTTAACACCAGGGTGGTGCGCGTCGCCGTGGCGCCGCCGCCATGCCGAGGTGGCCCCGGCGACGCGCTGAGATGGGTGGTAAGATCCATGGACGCCGGCCTCTGGAAGCGATGCACCGATGACCAGATGGCCGAGGCGCACTGCGTCGAGGAGGTGTTCGACGCCGTCGTCGTGGCCACCGGCCACTACTCGCAACCAAAGCTGCCTAGCATCCAAGGAATGGGGGATTGGAAACGGAGGCAGATGCACAGCCACTGGTACCGGGTCCCGGACTCCTTCCGCGACGAGGTGGTGGTGCTGGTGGGCTGCGGCGACAGCGGCATGGACATCGCGCTGGACCTCCTCGCCGTCGCGAGGGAGGTGCACCTCTCCGCCAAGTCTGTGGAGGCGGCCGCGACGCCGGCGATGTCCAAGATGCTGGCGAGGCACGCCAACCTCCACCTGCACCCGCAGATCGAGCGCCTGTGCGACGACGGCCGCGTGGTGTTCGCCGACGGCGGCGGCGGCGTCGTCGCCGCCGACACCGTCATGTACTGCACCGGGTACCGCTACTCGTTCCCGTTCCTGGACACCGAGGGGAAGGTCGCCGTCGACGACGACGACAACCGCGTCGGGCCTCTGTTCGAGCACACGTTCCCGCCGTCGCTCGCGCCGTCGCTGTCGTTCGTCGGCATCCCGAGGAAGGTGATGGTGCCGTGGTTCTTCGAGGCGCAGGGGAGGTGGATCGCCGGCGTGCTGTCCGGCCGGCGGGCGCTGCCGTCCGAGGAGGAGATGACGCGGTCCGTGGAGGAGTTCTACCGCGCCAGGGAGCTCGCCGGCGTGCCCAAGGCGCACACCCACGACGTCGAGCCTCACAAAATGTATGAGCTTGGGGAGAAGTACTGCGATTTCCCGCGCACGGAGGAGTGGAAGAGGGAGCTGATGGCGATCATCAGCCGGAACACGAGCGACGACATGGAGACGTTCCGCGACCGCGACGACGACAGCGACAACGTCCGCAGGTGCCTGCAGGAGTGGTACGCCCTGGCTGAGCACCAGGCTCAAGACGAAGAAGACCCAGCTGCCGCTGCTGCACAAGCACCCGTGCACAGCTCGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAACVDDVGKPRASRKVCVIGAGMAGLAAARELRWEGHAVTVLEQAGDVGGQWLYDDPRADDDDEDPLAAAAAAAAAKPVRVHSSMYASLRLLGPREVMGFSDFQFVPARKSRCGGGDNPGGRDPRRFPGHREVYLYLRDFYRAAGLTDSVRFNTRVVRVAVAPPPCRGGPGDALRWVVRSMDAGLWKRCTDDQMAEAHCVEEVFDAVVVATGHYSQPKLPSIQGMGDWKRRQMHSHWYRVPDSFRDEVVVLVGCGDSGMDIALDLLAVAREVHLSAKSVEAAATPAMSKMLARHANLHLHPQIERLCDDGRVVFADGGGGVVAADTVMYCTGYRYSFPFLDTEGKVAVDDDDNRVGPLFEHTFPPSLAPSLSFVGIPRKVMVPWFFEAQGRWIAGVLSGRRALPSEEEMTRSVEEFYRARELAGVPKAHTHDVEPHKMYELGEKYCDFPRTEEWKRELMAIISRNTSDDMETFRDRDDDSDNVRRCLQEWYALAEHQAQDEEDPAAAAAQAPVHSSL</aaseq>

Gene Sequence

<dnaseqindica>1..673#786..856#958..1524#1602..1847#ATGGCGGCCTGCGTCGACGACGTCGGCAAGCCGCGGGCGTCGAGGAAGGTGTGCGTGATCGGCGCCGGGATGGCCGGGCTGGCGGCGGCGCGGGAGCTGCGGTGGGAGGGGCACGCCGTGACGGTGCTGGAGCAGGCCGGCGACGTGGGCGGGCAGTGGCTGTACGACGACCCGCGGGCCGACGACGACGACGAAGACCCGCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGAAGCCGGTGAGGGTGCACAGCAGCATGTACGCCTCGCTCCGGCTGCTCGGCCCCCGCGAGGTCATGGGATTCTCCGACTTCCAGTTCGTGCCGGCCAGGAAGAGCCGCTGCGGCGGCGGCGACAACCCCGGCGGCCGCGACCCGCGCCGCTTCCCGGGGCACCGCGAGGTGTACCTCTACCTCAGGGACTTTTACCGCGCGGCGGGGCTCACCGACTCCGTCAGGTTTAACACCAGGGTGGTGCGCGTCGCCGTGGCGCCGCCGCCATGCCGAGGTGGCCCCGGCGACGCGCTGAGATGGGTGGTAAGATCCATGGACGCCGGCCTCTGGAAGCGATGCACCGATGACCAGATGGCCGAGGCGCACTGCGTCGAGGAGGTGTTCGACGCCGTCGTCGTGGCCACCGGCCACTACTCGCAACCAAAGCTGCCTAGCATCCAAGGTGCGTAGCGCCGACGAGCGACCAAATCAGCAAACCTGCTCTTGTCTCAGGCAGAAATCGAAATGCTAATCTCGCCGGTAATTACCCTGGTCGAAATCTCTTAATTAATCAGGAATGGGGGATTGGAAACGGAGGCAGATGCACAGCCACTGGTACCGGGTCCCGGACTCCTTCCGCGACGAGGTTAATTAACTAATTTGCTGCCACGGCTGTGATTTGTGACTAATCACAACCACAGTGCCCGTTAATCTTGGATTAATCCTGGCGTGCGTGCAACGCTGCAGGTGGTGGTGCTGGTGGGCTGCGGCGACAGCGGCATGGACATCGCGCTGGACCTCCTCGCCGTCGCGAGGGAGGTGCACCTCTCCGCCAAGTCTGTGGAGGCGGCCGCGACGCCGGCGATGTCCAAGATGCTGGCGAGGCACGCCAACCTCCACCTGCACCCGCAGATCGAGCGCCTGTGCGACGACGGCCGCGTGGTGTTCGCCGACGGCGGCGGCGGCGTCGTCGCCGCCGACACCGTCATGTACTGCACCGGGTACCGCTACTCGTTCCCGTTCCTGGACACCGAGGGGAAGGTCGCCGTCGACGACGACGACAACCGCGTCGGGCCTCTGTTCGAGCACACGTTCCCGCCGTCGCTCGCGCCGTCGCTGTCGTTCGTCGGCATCCCGAGGAAGGTGATGGTGCCGTGGTTCTTCGAGGCGCAGGGGAGGTGGATCGCCGGCGTGCTGTCCGGCCGGCGGGCGCTGCCGTCCGAGGAGGAGATGACGCGGTCCGTGGAGGAGTTCTACCGCGCCAGGGAGCTCGCCGGCGTGCCCAAGGCGCACACCCACGACGTCGAGCCTCACGTAAGCACATCCCATGGCGGTCTAATCTGTTCACTTCTTGATCGAATATTTGAATGATCGCTCGTTTTGGTGGTCAGAAAATGTATGAGCTTGGGGAGAAGTACTGCGATTTCCCGCGCACGGAGGAGTGGAAGAGGGAGCTGATGGCGATCATCAGCCGGAACACGAGCGACGACATGGAGACGTTCCGCGACCGCGACGACGACAGCGACAACGTCCGCAGGTGCCTGCAGGAGTGGTACGCCCTGGCTGAGCACCAGGCTCAAGACGAAGAAGACCCAGCTGCCGCTGCTGCACAAGCACCCGTGCACAGCTCGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008498