Os12g0588100

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0588100| Description = Conserved hypothetical protein| Version = NM_001190105.1 GI:297729340 GeneID:9268530| Length = 5361 bp| Definition ...")
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Gene Name

Os12g0588100

Description

Conserved hypothetical protein

Version

NM_001190105.1 GI:297729340 GeneID:9268530

Length

5361 bp

Definition

Oryza sativa Japonica Group Os12g0588100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24788810..24794170

Sequence Coding Region

24788810..24788866,24789019..24789160,24790235..24790368,24791314..24791969,24794149..24794170

Expression

GEO Profiles:Os12g0588100

Genome Context

<gbrowseImage1> name=NC_008405:24788810..24794170 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24788810..24794170 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatacaatggatcattgtgtggttgctcttcctgataagcagcattctcttgagatgaccactgtggggtgcctcttcctttcaacatggatccgttgtttcacggacgcattctcaaggggcatgagctggaagggagatttcacgctggatgatttcaagatcgtggatggccacgttcggaggatcaagaagcccaagcggtcttgctgcagggaggagatgcaggacgatgtgagcaagtttgtggaagagatagagcgtatcttcagaaacgatgacagtcgactcatctcaaagcacccaccctacttcagagacttcatctatcgtctcaggaacatggaaatcatctctgatgccctatcgcctcggcataagctactcatcgagtcacacatgtgctttatgacttctagctccagggtatcattcataattaaactctactgcaagtacgaaggtgccaatgaatctgatgaacccaagtgggcgactgcaatacaagatgctcgtagttcaagtgaatggcgctcaaccgtgtctcgagtgatcatctttaaggaccttattgttagagctgacaaagctgaatcaccatatggatcgacaaggtttgaagccttcaggcttgttagaaatgcagccatgcatgctgcagaatatcgattcgatggtagaaggaatgcaatagttgagaggtttccaaatgatagtggaattgaacttatgataccttgtcacttcgaagaatttattccccacattgttgcaaacataatcaaggagggagttgacatcactcaggaggaggagttgaggtccagacgatcaaggataccgggtgacgaagttggatacaacatggcatacggtggatggacatcgtgtaggagagatcttcgtaacgggcttcacgaggtgtgcgtgcaagcgtcggtgttcgcgaaggtagcaatgcagtggctcggttggatacagaccgtgtcggcctggagggcaaggtag</cdnaseq>

Protein Sequence

<aaseq>MNTMDHCVVALPDKQHSLEMTTVGCLFLSTWIRCFTDAFSRGMS WKGDFTLDDFKIVDGHVRRIKKPKRSCCREEMQDDVSKFVEEIERIFRNDDSRLISKH PPYFRDFIYRLRNMEIISDALSPRHKLLIESHMCFMTSSSRVSFIIKLYCKYEGANES DEPKWATAIQDARSSSEWRSTVSRVIIFKDLIVRADKAESPYGSTRFEAFRLVRNAAM HAAEYRFDGRRNAIVERFPNDSGIELMIPCHFEEFIPHIVANIIKEGVDITQEEELRS RRSRIPGDEVGYNMAYGGWTSCRRDLRNGLHEVCVQASVFAKVAMQWLGWIQTVSAWR AR</aaseq>

Gene Sequence

<dnaseqindica>5305..5361#5011..5152#3803..3936#2202..2857#1..22#atgaatacaatggatcattgtggtaggcctgctcctagactgttgtcttcatgatgcattcaacacctcgttccttgctccgatcttaattttaactttagtactgaattcgtctatgcaacgttcaggaaattggaacaagaccaggtgagcttctgtgtaccattattagattgaggccctaatgattgcgagtggtggtggtcatatacaatttcttttttggattgctacttatagtcctgcggcctggatgttgtttttgcgatgcattaatcacctaattttcatactcatatgaatttttatgtggccagacatgaatttgtgtgtgcagtattgttagaaatctgctcacatctaaattttcatttgttcagttatcaggagttggcgcccttgctgtagaacaacacctgcaacatgcacatactctgttgtttctccgcatcggctgtttttgccaatgaggcggggatggcaaccttcacatctgccgctgcctgactacctaactgctatatctgcatgttttttttggaatacttagataattaactagtgaatgctctgaattttacttgatgcgagaacttgcgttggaggcatagcttgatggcacagcagttcacaatgctctgctttaaatgttcatgttctgaactttttgggttgagcagattagttaagagtggattgctccaaataggttagctgaattttgttctactgcaggaatgctctgaataaattttgtagacttgatatttggattaaacccgttattttcaagtttgtatatttctatgcctcattgatatgcttaaatatgacacccctcacttataactgttggctaacaataggcataataaagtgaggttcttatgaagcattttatttcttctttagataattgtatctcacttagagtcatttatgagtgtaaatcacttagatgatttaatctttttttgcaaatatccaggtggccatgggatgcctccctagatgatggccgtgggtgatggatatctgttgatggggaggcctagagaatctgcagcactttgtcagcttgattcgatatgtggcgccggagtcgtcctactcgcgggattcgggcaagggtcgacccacatcgttaggcctgatctacattgttggtgttgttgtaatcttttatttgtttttgtgtattctaccaatatatcgcattgtgtatgttgattagatagttgttgtaatactaaatcttgttcaaacatttctcggatgttcatacatcttttactcaagcagtctgggactaagaacaatcaatttactcatttactcaaggaaggtggatcaagaaaaacataaaataatttatttactaagataagactagggtaatttttgttgctaaatcaaaagtttatacttctaacttgagaataatttctttactgatagaaggttggagcaatcaaatcttaagtaactatgttactaattaaagtttactggtagttttatctttcagtaaaacaattactaaaaagtcaaactttatggtacaataaaaccgcaagtaactttgttactaattgaatatacagataatgatagtaactgagttactcaatcactcctatcatttctccacgtggtgttcctgcgacccagagtggttttgtgtgggggcttttacatgaatattaaattgttaacttgtcattaataacggtaaggaactcttcgtaaaattgttactcacaagcataccggaatggttaccacacaagcacttaagtaaataaattactaagatgactaccattcagtaaataacatactaatatgtttacctgtcaaaaaaaggtgcggtatggattcattatccaattttcacgaataataaatatgttactgatagtgtattgtactattgataaggccttagtaatcgttttactatatatgattttgaaacagggattggggtgtggggtggggcgcctgggggtgggtgggggtgcatactgtgaggagagtgttttagttatagcgcaccccatacgcggtttagtgcatccctatatatatatatatatatatatatatatatatatatatatgatgattatttacacatttttacaggatcctcactttaaaacaatacctggttgctgcacgggcatcttttatgcaagtggttgctcttcctgataagcagcattctcttgagatgaccactgtggggtgcctcttcctttcaacatggatccgttgtttcacggacgcattctcaaggggcatgagctggaagggagatttcacgctggatgatttcaagatcgtggatggccacgttcggaggatcaagaagcccaagcggtcttgctgcagggaggagatgcaggacgatgtgagcaagtttgtggaagagatagagcgtatcttcagaaacgatgacagtcgactcatctcaaagcacccaccctacttcagagacttcatctatcgtctcaggaacatggaaatcatctctgatgccctatcgcctcggcataagctactcatcgagtcacacatgtgctttatgacttctagctccagggtatcattcataattaaactctactgcaagtacgaaggtgccaatgaatctgatgaacccaagtgggcgactgcaatacaagatgctcgtagttcaagtgaatggcgctcaaccgtgtctcgagtgatcatctttaaggaccttattgttagagctgacaaagctgaatcaccatatggatcgacaaggtttgaagccttcaggcttgttagaaatgcagccatgcatgctgcagaatatcgattcgatgtaagtactggttatatatattactgtgcaattgatcgattagtgtttttattattattctcttgctaactttctggttaatttgctgtgcatgatacaattaaacagagtacagtactccctccagttcctaatttgttgacgttttagacaggattacacataccaatgagtgattaattagtgtacctacttcatgttttacccctaataaatacggttttaaggcataccaaatcataacctgctcttggtttgagtggccatctcatgcgaaagtgaagctaccagtcctgagttcgattcttggtggccacatttttttgcatggcactgtggatgcatgactgttggcatgcatgcacttttttcaggcgttcacgtgtgcagtcgccgggaaagatttttcactcgcgcgctgctaacaaaaattttgccaggtgcgtttgccgccaataactcagattttggcgctggtttgcaacagaatcccctttgccatctccatctatttatgctgtgcaatactagctagtttgacgctccaactccctacatattccatctgtttaacatgaacttgaacatggagccatgacctgctccatggcgaaaatggcgaaagtagtacaaggaggcgagtagaaggcaaagagccaacaagcagacatagaaaaaggaaattactcagcgcgtgggagagcaatggttgaacaggaaacgagaaggcaaagcatacatgacgttggaaataatgggagtagtaatggccggctgcatgcatgcagggacaagcaggtccaagatgcaccaaaaaagctaaaacgtcaagaaatatcacacaatgcttcaaactaatttcaaactggagggagtagtagttaagatttctttctttgtttgacgttgtttgtttgcttctcttttttttttcttttcttgcagggtagaaggaatgcaatagttgagaggtttccaaatgatagtggaattgaacttatgataccttgtcacttcgaagaatttattccccacattgttgcaaacataatcaaggagggagttgacatcactcaggagtatgatataattaataaacttagtagtagaaatagtatttttagtcaatcttataaattcaagtcctgacatagtgacatgtcataacttgtagcttgtcggcttttgctgtgtgcactggttgccccacatgtgcgttacttgctcaagaacaatcatagggtacgtatcatctacgagtattactacgtactgcatttttcatcatatatttgtgtttttagtggattcagcaaatatttgttgaataactacatgtgtgcccatgattaacatcagatatttataatgttccaaaatagttatttttagataatcattttttggcaatgtttactgaatggatgcatgacactctgttttgttcaacgacccatgcataaacacaatttagggagttttaccttttcattcaacgacccatgcatgacactctgtttcgttctccctgtcttttaatttcatctatgcatcagtgtccacaagctattagtactatgtgttgaagatattatacttgccgtctgcatttatattcttaactggagtagtacttataaaacagctagccctgcacgcacatatgtatacgtactgaggcaaatatctctgccttctatcaagttgcactaaaacatagtagtataagcaaactgactggtctagcttagcttcttgctccctaaattaaacatataatcggtcggtcgatctgatttaatttctgtcgaggagatgtatgtgaaatcaacgtcatgattaatatttgtgatgaacaattggctgtgcaaatgattttatcaatgaattggtttgaaaagatgtgtggatgttggtgtgagctgcgtgtgattaatgtgggtcagattgtgatatctgtgcctagaaacggttgttttgtctgattttgtgcaggtgacttgaggtcagccttagtcaatggtgaggaccggggctatgctcagggaggagtagaggtctagtgcggtcgggataccatgtgagaaggttactagagtctggattcttggaggacaacttcggtcaacggtggggatcgggactaaactcagggaggagttgaggtccagacgatcaaggataccgggtgacgaagttggatacaacatggcatacggtggatggacatcgtgtaggagagatcttcgtaacgggcttcacgaggtgtgcgtgcaagcgtcggtgttcgcgaaggtattggagaagagtatatggtgctatagtacggcatggtactgtagcatgcatatatgtgtgattgatcgtgtctgtgattggctggcatatggtgctacagtacgggcggtactgtagcatgcatgtgtgtgtgcgttctgtgcaaacaggtagcaatgcagtggctcggttggatacagaccgtgtcggcctggagggcaaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0588100, RefSeq:Os12g0588100