BGIOSGA008518

From RiceWiki
Revision as of 03:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008518| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008518, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008518

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008518, complete gene.

LocusTag

OSJNBB0056I22.54

Ensembl Transcript ID

BGIOSGA008518-TA

Ensembl Protein ID

BGIOSGA008518-PA

Length

831

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24389484..24390314

Sequence Coding Region

24389484..24389562,24389779..24390314

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24389484..24390314 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24389484..24390314 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCAAGGGTTTACTCGTGTTCACTCTGCTGCTCGCTGCTGCCTTCCTCGTCAACTGCGCTCGACAAGAACCTCATCAGAACTCACGTTTATATGTACGTGCAGAGCCCAACGAGGGACCGACAGCTGACCCCGACGCCGGCGCCGGCGGCGACCACGGAACGTCATCGGGCAACGGCAAAGCGTCGGGCCATCGGCCGCAGGCGAAATTCGGCGGCGGCTGCTGCTGCAGCGCCGGTTGCAGCGAGCAGTGCGCCGAGTGCCCTCGCCCTCCACATCCACCCCCATCTCCATCTCCATGCGTCCATCCCCCCTGCTGCGAGTCGGCCGCTGGCTGCTGCTGCAATGGATGCAGCGGCGGCGGTTGCGGTGGTGGTCAGTGCCCGCCATCTCCGTCATGCGAGAATCATCATCCTCCCTGCAAGCCGGGCTGCTGCTGCTGCGGATGCAGCGGCGGCGAGTGCCCTCCGCCTCCATCTCCGCCGTGCCAGCATGAGTGCCCTCCAACTCCGCCATGCGAGCATCCTCCCTGCAGCGAGTCGGGCTGCTGCGACAAGGGTTGCAACAGCTGCTGCAACCGGTGCGGCGAGTACGGACAGTCCCGCCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MASKGLLVFTLLLAAAFLVNCARQEPHQNSRLYVRAEPNEGPTADPDAGAGGDHGTSSGNGKASGHRPQAKFGGGCCCSAGCSEQCAECPRPPHPPPSPSPCVHPPCCESAAGCCCNGCSGGGCGGGQCPPSPSCENHHPPCKPGCCCCGCSGGECPPPPSPPCQHECPPTPPCEHPPCSESGCCDKGCNSCCNRCGEYGQSRP</aaseq>

Gene Sequence

<dnaseqindica>1..79#296..831#ATGGCGTCCAAGGGTTTACTCGTGTTCACTCTGCTGCTCGCTGCTGCCTTCCTCGTCAACTGCGCTCGACAAGAACCTCGTACGGGACGCAATTAATTAACTGCATGCACGAATTAGCTAATTAAATGTCCATGTTAACATCCATGTTTGTTGTTTTTTTTTCCCTTATCTGTAGCAGCGCCACAACGCACAAAAGCGTTCATCCATGACAAATAAATCATCTGCTATATATATACTGCATATGCGTTCAGTGTTCTTAGCATATATGTATGCGTCTGCTATATATACTTTTCAGATCAGAACTCACGTTTATATGTACGTGCAGAGCCCAACGAGGGACCGACAGCTGACCCCGACGCCGGCGCCGGCGGCGACCACGGAACGTCATCGGGCAACGGCAAAGCGTCGGGCCATCGGCCGCAGGCGAAATTCGGCGGCGGCTGCTGCTGCAGCGCCGGTTGCAGCGAGCAGTGCGCCGAGTGCCCTCGCCCTCCACATCCACCCCCATCTCCATCTCCATGCGTCCATCCCCCCTGCTGCGAGTCGGCCGCTGGCTGCTGCTGCAATGGATGCAGCGGCGGCGGTTGCGGTGGTGGTCAGTGCCCGCCATCTCCGTCATGCGAGAATCATCATCCTCCCTGCAAGCCGGGCTGCTGCTGCTGCGGATGCAGCGGCGGCGAGTGCCCTCCGCCTCCATCTCCGCCGTGCCAGCATGAGTGCCCTCCAACTCCGCCATGCGAGCATCCTCCCTGCAGCGAGTCGGGCTGCTGCGACAAGGGTTGCAACAGCTGCTGCAACCGGTGCGGCGAGTACGGACAGTCCCGCCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008518