BGIOSGA008519

From RiceWiki
Revision as of 03:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008519| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008519, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008519

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008519, complete gene.

LocusTag

OSJNBB0046O12.20

Ensembl Transcript ID

BGIOSGA008519-TA

Ensembl Protein ID

BGIOSGA008519-PA

Length

4395

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24414560..24418954

Sequence Coding Region

24414560..24414668,24415381..24415674,24415901..24416013,24416222..24416600,24416704..24416742
,24416826..24417113,24417364..24417503,24418066..24418558,24418680..24418954

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24414560..24418954 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24414560..24418954 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGGGCAGCCATGGCTGCTCCGTTCTTGGGTCGTCGCTGCTGCTGCTGTTCTGTCTGGGCTCCGCCGCCGCGCAGAAGGCCTCGACTTGGAAGACACTGAGCGGCAATCCTCCAGCAATCATCGCCAAGGGCGGGTTTTCAGGCCTTTTTCCTGATTCCAGTGATTTTGCTTATGGCTTTGTTGCGGCGGCCAGCTCTCCGGATACAGCCCTGTGGTGTGATGTTCAATTAACCAGGGATGGTGCAGGCATCTGCCTTCCGGACATACGAATGGATAATTGCACAAACATAGCTAATGTTTATCCAAAGGGGAAGAAGACTTACAGTGTCAATGGTGTATCTACGCCTGGGTGGTTTTCCGTGGACTATGACAGCACTGGGTTGAGTAAAGTAAACTTGGTACAATCCCTATTCTCCCGTGTGCCTTACTATGATGGAACTTTACCCATACTTCCTGTTGAATCTGTATTTGCTAATTATAAGGCCCCTGCTGTTTGGCTAAATGTGCAGGAAGAGTTAACAAGAAGACGAAAGCTTGTGTTTCGGCTTCTTAATGAACTCGCTGTTGAGCCATCTACAAACCAGACATATGGCTCAATGTTGAAAAATCTAACATTCATCAAGACTTTTGCATCTGGAATACTTGTCCCTAAGAACTATATCTGGCCTGTAACACAAGACAATTATCTGCAGCCCAGCACATCGGTCGTTGGTGATGCTCATAAAGCAGGACTAGAAGTTTATGCCGCTGATTTTGCAAATGACTTTTTGCTCAGCTACAACTACAGCTATGATCCATTAACAGAATATCTTAACTTCATTGATAATGGTGCCTTCTCTGTTGATGGTGTATTGACTGATTTCCCTATTACCCCTTCAGAGGCCATTGGTTGCTTTAGTAACCTCAACAACAGCAAGACAGACAATGCGAAACCTCTCATCATCTCCCACAATGGTGCTAGTGGTGACTACCCAGATTGCACTGACCTAGCTTATCAAAAGGCAGTTACTGATGGTGCAGATGTCATCGACTGTCCCGTACAAGTAACCAAAGATGGCATACCTATATGCATGAGTTCCATTGACCTAATGGATGTCACTACTGTTTCAACGTCACAATTTTCTTCTCAAACGACTGTCATAAAAGATATCAAGAATGGTGCTGGAGTCTATTCCTTCAACCTCACATGGGATGATATTGCGAAGAACCTGAAGCCCAAGATATCAAACCCAATGACCACATTTGATGTGTACAGAAATCCTAGAAACAAGAATGCAGGAAGTTTCATGAGACTATCGGACTTCTTGGCCTTTGCAAAAGGAAAGGAGTTGTCAGGAGTCATGATCAGTATAGAGCATGCTGCATTCATGGCAGAAAAACTTGGATTTGGTGTAGTAGATGCGGTGATCAAAGCCCTTGATGACTCCGGCTATAGCAAACAGACTGCCCAGAAAGTCATGATTCAGTCAACCAACAGCTCAGTACTAGTGAAGTTCAAGGAGCAAACCAAGTACAACCTTGTTTACATGCTTGAGGAGGATGTCAGAGATGCTGCACCTTCCTCCCTTGCAGATATCAAGAAGTTTGCTAATGCTGTTTCAGTCCGCACAACGTCCATTTACCCGGAGAGCAAACATTATTTGATAAACCAGACCAGTCATATCGTCCAGACCCTGCAGTCCGCTGGCCTTCCCGTTTATGTTTACGTGCTCATGAACGAGTTTGTTTCGCAACCGAATGACTTCTTCGCAGACGCCACAACACAGATCAACACATACGTGCAGAAGAAAGGTGCTGGAGTGGATGGGATCATCACAGATTTCCCTGCGACGGTGCACAGATACAGACTGAGCCCCTGCACGAGCAAGGAAAGCAACTTGCCGACCTTCATGCTGCCTGTCCAGCCCGGTGGCCTCAGCGGGACCATCATCGATCCAGCTGCACAGCCACCAGCAATGGCGCCAATGCCTCTCTTGACGGACTCCGACGTCGCGGAATCACCCCTACCGCCGGTCAAGAACGTCACAGCTCCAGCCCCGGGCGCTTCACGAGCCATCAAGATGCGGACCGACGCCTCGATCATCGTCGCGCTGCTGGTGCTATGCGCTTCTCTGATCATATGA</cdnaseq>

Protein Sequence

<aaseq>MGRGSHGCSVLGSSLLLLFCLGSAAAQKASTWKTLSGNPPAIIAKGGFSGLFPDSSDFAYGFVAAASSPDTALWCDVQLTRDGAGICLPDIRMDNCTNIANVYPKGKKTYSVNGVSTPGWFSVDYDSTGLSKVNLVQSLFSRVPYYDGTLPILPVESVFANYKAPAVWLNVQEELTRRRKLVFRLLNELAVEPSTNQTYGSMLKNLTFIKTFASGILVPKNYIWPVTQDNYLQPSTSVVGDAHKAGLEVYAADFANDFLLSYNYSYDPLTEYLNFIDNGAFSVDGVLTDFPITPSEAIGCFSNLNNSKTDNAKPLIISHNGASGDYPDCTDLAYQKAVTDGADVIDCPVQVTKDGIPICMSSIDLMDVTTVSTSQFSSQTTVIKDIKNGAGVYSFNLTWDDIAKNLKPKISNPMTTFDVYRNPRNKNAGSFMRLSDFLAFAKGKELSGVMISIEHAAFMAEKLGFGVVDAVIKALDDSGYSKQTAQKVMIQSTNSSVLVKFKEQTKYNLVYMLEEDVRDAAPSSLADIKKFANAVSVRTTSIYPESKHYLINQTSHIVQTLQSAGLPVYVYVLMNEFVSQPNDFFADATTQINTYVQKKGAGVDGIITDFPATVHRYRLSPCTSKESNLPTFMLPVQPGGLSGTIIDPAAQPPAMAPMPLLTDSDVAESPLPPVKNVTAPAPGASRAIKMRTDASIIVALLVLCASLII</aaseq>

Gene Sequence

<dnaseqindica>1..109#822..1115#1342..1454#1663..2041#2145..2183#2267..2554#2805..2944#3507..3999#4121..4395#ATGGGGAGGGGCAGCCATGGCTGCTCCGTTCTTGGGTCGTCGCTGCTGCTGCTGTTCTGTCTGGGCTCCGCCGCCGCGCAGAAGGCCTCGACTTGGAAGACACTGAGCGGTAACATTCACTGGTCCTCCCTTCGTTTCTTGGTTCTCTGCTTAGTGATCTGATCTGGGATGTTCTTGCGTCTTGGGCTCGAGAGGTTACTTCTTTACCAGCAATTTTTGGTTTTGTCCCACTGTTTGGGCTGGATCTTTAGGATGAGGATCAGGTGAATGCTTATTTTTGCTCAAGGTTCTATTTTTTCTTTCAGCAAGATAGTTTTGCTGATGTTTAGCACCGCCTGGGTGACCAGATTTCTGACTGGAAGCTTGGGGCCGGCCATATAATGCTTCCTTTTTTTTTTCTTTCTTAAAAAAATTTGGTACGGTAACCTTTTCAGGTGAGTGACATTTGGGTTAGGATACCATTGTCGCAGCAGTCTGTGTGTTAATAATTTACAGCATGACCGCAAGATGTTTATTGCTTATGTGCATCTCAGGGTGGGATTTTCTCAAGTCACTGTCTTGTAGGCTTGTCATGTTCACCTGGAGGTTGTGAGAATAGGAGTGGTTCTCGATGTATATGAACTTCAAGGACAAGGAGTGACTTCCTTACTGATTTACCAATGATAATGATCGATTGTTAGCTGGTTAACACATTTTAAGTTTAACGAGTTGTATGCTCGTCTGTTTATTGTAGTTATGGATTCTGTGCTGCGGCAGTGCGCTGAAAATCCACCTCTTTTGGACGGTCTGGAAAGCCTAACTAAGTCATTTCATTGTTTCAGGCAATCCTCCAGCAATCATCGCCAAGGGCGGGTTTTCAGGCCTTTTTCCTGATTCCAGTGATTTTGCTTATGGCTTTGTTGCGGCGGCCAGCTCTCCGGATACAGCCCTGTGGTGTGATGTTCAATTAACCAGGGATGGTGCAGGCATCTGCCTTCCGGACATACGAATGGATAATTGCACAAACATAGCTAATGTTTATCCAAAGGGGAAGAAGACTTACAGTGTCAATGGTGTATCTACGCCTGGGTGGTTTTCCGTGGACTATGACAGCACTGGGTTGAGTAAAGTAAACTGTAAGTGAAACTCACAATTTTGTAATTCTAATATTCTTTTATCCTTTTCTTTTATCAAGTGAACTGTAGACTAGTAATCTCCTGTTTCTTGTGTGTTGGGAGAAGAAAAATGCTCAAATATATGCGCGTTGTTTCTTGAAACACCATAAAAGAGATACAAAACCTATAGTTTCTTCTTGAATAATGCAGATCTTCTGCTTGTCTTAACTAAGTTTGATATTTGCAGTGGTACAATCCCTATTCTCCCGTGTGCCTTACTATGATGGAACTTTACCCATACTTCCTGTTGAATCTGTATTTGCTAATTATAAGGCCCCTGCTGTTTGGCTAAATGTGCAGGTAGAGCTGAAACTTTAATTACTTCAAGTCAACTATGAATTAAGTGATACTCCCCTCGTTCTAACAGCTGCTCTGTGCAAATTGCAGCATGACAGTTTCTATAGCCAGTTTAATCTGAGTATGAGAAGCTATATCCTGTCTGTTTCAAAACAATATATTGCTGACTACATCTCATCACCTGAAGTGAACTTCCTTACCAGTTTATCAGGAAGAGTTAACAAGAAGACGAAAGCTTGTGTTTCGGCTTCTTAATGAACTCGCTGTTGAGCCATCTACAAACCAGACATATGGCTCAATGTTGAAAAATCTAACATTCATCAAGACTTTTGCATCTGGAATACTTGTCCCTAAGAACTATATCTGGCCTGTAACACAAGACAATTATCTGCAGCCCAGCACATCGGTCGTTGGTGATGCTCATAAAGCAGGACTAGAAGTTTATGCCGCTGATTTTGCAAATGACTTTTTGCTCAGCTACAACTACAGCTATGATCCATTAACAGAATATCTTAACTTCATTGATAATGGTGCCTTCTCTGTTGATGGTGTATTGACTGATTTCCCTATTACCCCTTCAGAGGCCATTGGTGAGTTGGATGTTGTGTCTTTTCTTACAATGCTATGGATGTTTGTTCAAGAAATTCAGGATGTTTGTTCTCTGTTCAATTATTTTATATATTGTCCCTGCAGGTTGCTTTAGTAACCTCAACAACAGCAAGACAGACAATGGTATGCTTGCTTCCTTTGCTCATGCATGCAACTTCCCTATATTAATGTAGTATTGAACTCCAGTCTTGACATTTTACTTGCAGCGAAACCTCTCATCATCTCCCACAATGGTGCTAGTGGTGACTACCCAGATTGCACTGACCTAGCTTATCAAAAGGCAGTTACTGATGGTGCAGATGTCATCGACTGTCCCGTACAAGTAACCAAAGATGGCATACCTATATGCATGAGTTCCATTGACCTAATGGATGTCACTACTGTTTCAACGTCACAATTTTCTTCTCAAACGACTGTCATAAAAGATATCAAGAATGGTGCTGGAGTCTATTCCTTCAACCTCACATGGGATGATATTGCGAAGAACCTGAAGCGTAAGTCAATTTTGAAATCCTTGGTAAAACTAAATTTTGTATTGATATGCAAATATACATCATGATAGTGGGGCCTGTAAGCCTTAAGTTATGTATGTATAAGTATGCTCGAGTCATCTCATTGTTGTACAATTAGTTAAACGGTGAACAAGTCATGGTTCATCTTCATCAATCATCTGTTTTGTTTCATCTATGAAATTTATTGCATTCATCATGCATTTGCCAAGACTGACGTTTTTCATATTTGCAGCCAAGATATCAAACCCAATGACCACATTTGATGTGTACAGAAATCCTAGAAACAAGAATGCAGGAAGTTTCATGAGACTATCGGACTTCTTGGCCTTTGCAAAAGGAAAGGAGTTGTCAGGAGTCATGATCAGTATAGAGGTAATGATTTAATACTTGGTAATGATGATTTTCTATCGCAGATCCATATCTGAATGCTTTTGTGCTGTAGTGTTGGCTTTTAGGTAGAACTTCGATGAAAATAATTAGGCGGTCTTTGGGATGGCTAATTTGCAAATAAGTAAATAATCCTCCAAGATGGTGCGATAGTTCTGGTACATTAGTGGATTCATAATCAATCTTGTGTCTGAATTCTTTGGATTTTGTTTTACAGAATTAAACAAACTGCTAACTTGTGCATACTTGAACCTCTTTAGTGCTTAAAAACTTGATGACTTCTGTGCCTCATGGTGTACACCTGTAGATTCTGGAACAATGTGCAAATGTGCAATGGAGTGTGGGCTTTGTTTTTGTGGCATAATGTATGGTTGCTAAATTTAAAATTGATTTTGCTATTTACTATTGCTTATTGAGTAAGCTAGCAAAAAAACCAAAGTAAAGTTCTTCAAAATATTTATTATAAAAATGCATATTTCTGGAGATGTGGCAATTCCTCATGGCCCTTACTACATTCTCAGTTCCATTTCCTTTTCAATTTTTGCAGCATGCTGCATTCATGGCAGAAAAACTTGGATTTGGTGTAGTAGATGCGGTGATCAAAGCCCTTGATGACTCCGGCTATAGCAAACAGACTGCCCAGAAAGTCATGATTCAGTCAACCAACAGCTCAGTACTAGTGAAGTTCAAGGAGCAAACCAAGTACAACCTTGTTTACATGCTTGAGGAGGATGTCAGAGATGCTGCACCTTCCTCCCTTGCAGATATCAAGAAGTTTGCTAATGCTGTTTCAGTCCGCACAACGTCCATTTACCCGGAGAGCAAACATTATTTGATAAACCAGACCAGTCATATCGTCCAGACCCTGCAGTCCGCTGGCCTTCCCGTTTATGTTTACGTGCTCATGAACGAGTTTGTTTCGCAACCGAATGACTTCTTCGCAGACGCCACAACACAGATCAACACATACGTGCAGAAGAAAGGTGCTGGAGTGGATGGGATCATCACAGATTTCCCTGCGACGGTGCACAGATACAGACGTAAGTTTTTCATAACACTCTCATTTAGCACCTCACCCTTAAATCATTTCAGTCCTCTGCATTGAACATTTCTGAACGAGTTTTTCGCTCACCCTCCGCCGTTGGATTTTCACCTGTGCAGTGAGCCCCTGCACGAGCAAGGAAAGCAACTTGCCGACCTTCATGCTGCCTGTCCAGCCCGGTGGCCTCAGCGGGACCATCATCGATCCAGCTGCACAGCCACCAGCAATGGCGCCAATGCCTCTCTTGACGGACTCCGACGTCGCGGAATCACCCCTACCGCCGGTCAAGAACGTCACAGCTCCAGCCCCGGGCGCTTCACGAGCCATCAAGATGCGGACCGACGCCTCGATCATCGTCGCGCTGCTGGTGCTATGCGCTTCTCTGATCATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008519