BGIOSGA008528

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Revision as of 03:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008528| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008528, complete gene.| tag = OJ1067_...")
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Gene Name

BGIOSGA008528

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008528, complete gene.

LocusTag

OJ1067_B01.4-1

Ensembl Transcript ID

BGIOSGA008528-TA

Ensembl Protein ID

BGIOSGA008528-PA

Length

2844

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24678266..24681109

Sequence Coding Region

24678266..24678973,24679933..24680124,24680291..24681109

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24678266..24681109 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24678266..24681109 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCAATCTTCCCCTTTCTTCTCCGTTGCCCGAGCACATGCTGGAGCAGGAGGGCGAGCTGCGGCTGCCGCTCTCCTGCTCCGTCACCCTGTTGCTCAGCTGCCACCTCGGATTCATGGCCTGAGGTACTACCCTTCAGCCATTGTGTCACCTGCCAAGACACTGAACTCACACCTGAGCCTTCCCCATGCCACAATATCCTCCTTTGCCAATGCTGATAATGGCTCCAGCGGGCAAGCAGATGCCACAGAGTCTGAGGAGGAGCAGAACGGGGAATCTGAACTGTCGGAGATGGCCAAGGCATTCCATATATCGCCCCGGATGGCAATGTCAATCTCAGTGGTGATTGCATTTGCAGCGCTCACTGTGCCACTGGCGATGCAGTCAGTGGTCTTCCATGGGACGAACAAAATGAAGGCACTGGCATATCTGACACTGCTTTCAGGGTTCTACATGGCATGGAACATTGGGGCAAATGATGTGGCCAATGCCATGGGGACGTCAGTAGGGTCTGGTGCTTTGACACTCCGGCAAGCAGTGCTTACTGCGGCGGTGCTAGAGTTCTCTGGTGCATTCCTTATGGGCACCCATGTCACCAGCACCATGCAGAAGGGCATCCTAGTCGCATCTGTCTTCCAAGGAAAGGACTCTCTGCTCTTCGCTGGATTGTTGTCATCCCTCGCTGCTGCTGGAACATGGTTGCAGGTTGCTTCCTCCTACGGCTGGCCTGTTTCAACTACACATTGTATTGTCGGGGCCATGGTTGGTTTTGGGATAGTATTTGGAGGCGTAAATGCAGTGTTCTGGAGCTCCTTGGCAAGAGTATCTTCATCATGGGTCATTTCACCATTGATGGGTGCTGCAGTCTCATTTATTGTTTACAAGGGTATACGAAGGTTCGTATATAGTGCACCAAATCCAGGTCAGGCTGCAGCTGCTGCTGCACCAATTGCAGTTTTTACTGGTGTTACTGCAATATCATTTGCCGCTTTTCCTCTCAGCAAGACTTTTTCAATCGCTATCCTGCAAGCATTAGCATGTGGCGCAATAGGAGCCGTAATCGTTAACAGAGTGATCCAAAAACAGCTTGGTGACCTACTGTCCTCAGAAGCAGAAAAGATAGCATCTGCTGATAAGGCAAATGCTCAGCAAGTTGGATTTCTTTCGGACATAGCTGGACCAACAGGAGCTCAATTGCAGATTGTATATGGTGTATTTGGATACATGCAGGTCTTGTCAGCATGCTTCATGTCATTTGCTCATGGAGGCAATGATGTCTCCAATGCCATAGGCCCCCTGGCGGCAGCTTTGTCCATTCTTCAAGGTGTAGCAAGCAGTGCTGAGATAGTCATACCTACTGAAGTCCTTGCTTGGGGAGGTTTTGGAATTGTTGCAGGGCTTACAATGTGGGGTTACAGGGTCATAGCAACAATTGGCAAGAAAATCACCGAACTAACACCAACTAGAGGTTTTGCAGCAGAGTTTGCAGCAGCTTCTGTAGTATTGTTTGCATCAAAACTTGGATTGCCAATATCTGCTACACATACACTTGTTGGTGCAGTGATGGGAGTGGGATTTGCAAGAGGGCTCAATAGGGTCAGAGCAGAGACAGTGCGTGAAATTGTGGCCTCCTGGTTAGTCACAATTCCAGTTGGTGCTGTGTTATCTATCTTCTACACATTGCTCTTCACAAAGATTCTGGCATACTTTATGTGA</cdnaseq>

Protein Sequence

<aaseq>MSQSSPFFSVARAHAGAGGRAAAAALLLRHPVAQLPPRIHGLRYYPSAIVSPAKTLNSHLSLPHATISSFANADNGSSGQADATESEEEQNGESELSEMAKAFHISPRMAMSISVVIAFAALTVPLAMQSVVFHGTNKMKALAYLTLLSGFYMAWNIGANDVANAMGTSVGSGALTLRQAVLTAAVLEFSGAFLMGTHVTSTMQKGILVASVFQGKDSLLFAGLLSSLAAAGTWLQVASSYGWPVSTTHCIVGAMVGFGIVFGGVNAVFWSSLARVSSSWVISPLMGAAVSFIVYKGIRRFVYSAPNPGQAAAAAAPIAVFTGVTAISFAAFPLSKTFSIAILQALACGAIGAVIVNRVIQKQLGDLLSSEAEKIASADKANAQQVGFLSDIAGPTGAQLQIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAAALSILQGVASSAEIVIPTEVLAWGGFGIVAGLTMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNRVRAETVREIVASWLVTIPVGAVLSIFYTLLFTKILAYFM</aaseq>

Gene Sequence

<dnaseqindica>1..708#1668..1859#2026..2844#ATGTCTCAATCTTCCCCTTTCTTCTCCGTTGCCCGAGCACATGCTGGAGCAGGAGGGCGAGCTGCGGCTGCCGCTCTCCTGCTCCGTCACCCTGTTGCTCAGCTGCCACCTCGGATTCATGGCCTGAGGTACTACCCTTCAGCCATTGTGTCACCTGCCAAGACACTGAACTCACACCTGAGCCTTCCCCATGCCACAATATCCTCCTTTGCCAATGCTGATAATGGCTCCAGCGGGCAAGCAGATGCCACAGAGTCTGAGGAGGAGCAGAACGGGGAATCTGAACTGTCGGAGATGGCCAAGGCATTCCATATATCGCCCCGGATGGCAATGTCAATCTCAGTGGTGATTGCATTTGCAGCGCTCACTGTGCCACTGGCGATGCAGTCAGTGGTCTTCCATGGGACGAACAAAATGAAGGCACTGGCATATCTGACACTGCTTTCAGGGTTCTACATGGCATGGAACATTGGGGCAAATGATGTGGCCAATGCCATGGGGACGTCAGTAGGGTCTGGTGCTTTGACACTCCGGCAAGCAGTGCTTACTGCGGCGGTGCTAGAGTTCTCTGGTGCATTCCTTATGGGCACCCATGTCACCAGCACCATGCAGAAGGGCATCCTAGTCGCATCTGTCTTCCAAGGAAAGGACTCTCTGCTCTTCGCTGGATTGTTGTCATCCCTCGCTGCTGCTGGAACATGGTTGCAGGTAATATTCCAATTAGATCACCTTATCAGTTACCGCCCTTTTGAGCTTTGCTGGAATGGTGACGATCAGAGGATGCAATCATGTAGTGCCATTAGCAGTACATAATTACTGAGACTTCTGCAAGTTTCAGTATATGAAACAAAATATTTAAGACATTCCATCAGCGACACATTCATGATGCAAGAATAGCATGATCTACCTAGCAAGGCAAAATCAATAGACCTTTGCACTTGAAGATGCTAGGTTAAGCCCCAGAAATAAATGATAGCAGTAAGTTGTAGCAGCTTTATTATATTCAGTGAAACCTACTGCATGAGAACCTTCTATGAGTTGATTGTACTATATTACACAATTTCCTTTGAGGTATAAACTCCACAATACGGTAAACAACTTCCATGGTAGGAAGTGAAAACTGAAAAGGGAAAGGAACTTAACAGCATAGCTTTAAACTTGTTGAAGTCTTTTAACGTAAGGATTTTAATCCAATTATATGCAGTTTCAGGATGTTGTGTAACATCCATCCGTGAATGTTGTGCAGCTCACTTGCAATTACCAGAGTTTGATGTCTATCTTATCAACAATCCCAACTAGCAGAAGTACAGAAGCAACAAAATGAGACAATTAAAGACAATGCTCACTAGAAATATAGCAACTTTTACAAGGGATAGACTAATGGAATCTTGAATCATTAGACAACTAGGCATGCACAATTTTGATGAAGACATTTTTGGTGGGACTCTAATTGCGGGAGAATGTTTCATCTGCTTAATCATTGGAATTAAGATATTTTCATGATTGCGGGAAAATTTAAATGCATACATCATGCCTCAAAGAAATATTTAACATAAAATTAAATGCCTCTGCCAAAGATCCAATTGTGTGCTCCCTTTTACGGTTATCTGAGCATAGCATATTAACATTTCTCAGAGTCAATATGAATTAACGCTTGCTATTTCTAGGTTGCTTCCTCCTACGGCTGGCCTGTTTCAACTACACATTGTATTGTCGGGGCCATGGTTGGTTTTGGGATAGTATTTGGAGGCGTAAATGCAGTGTTCTGGAGCTCCTTGGCAAGAGTATCTTCATCATGGGTCATTTCACCATTGATGGGTGCTGCAGTCTCATTTATTGTTTACAAGGGTATACGAAGGGTAAGCACTAGACTAACTTTACTTGCAGCATGCTAGACAGCATTTTTAATTTAAGAGTTACTTAGTTAGGCAGTCACCTTATTGAACACACATCATAAATAGAGGACATAGGACTGTTCAAGACAAGACAATAAGTTAATTCTCTGCTTACCCTATTTCATTTCAGTTCGTATATAGTGCACCAAATCCAGGTCAGGCTGCAGCTGCTGCTGCACCAATTGCAGTTTTTACTGGTGTTACTGCAATATCATTTGCCGCTTTTCCTCTCAGCAAGACTTTTTCAATCGCTATCCTGCAAGCATTAGCATGTGGCGCAATAGGAGCCGTAATCGTTAACAGAGTGATCCAAAAACAGCTTGGTGACCTACTGTCCTCAGAAGCAGAAAAGATAGCATCTGCTGATAAGGCAAATGCTCAGCAAGTTGGATTTCTTTCGGACATAGCTGGACCAACAGGAGCTCAATTGCAGATTGTATATGGTGTATTTGGATACATGCAGGTCTTGTCAGCATGCTTCATGTCATTTGCTCATGGAGGCAATGATGTCTCCAATGCCATAGGCCCCCTGGCGGCAGCTTTGTCCATTCTTCAAGGTGTAGCAAGCAGTGCTGAGATAGTCATACCTACTGAAGTCCTTGCTTGGGGAGGTTTTGGAATTGTTGCAGGGCTTACAATGTGGGGTTACAGGGTCATAGCAACAATTGGCAAGAAAATCACCGAACTAACACCAACTAGAGGTTTTGCAGCAGAGTTTGCAGCAGCTTCTGTAGTATTGTTTGCATCAAAACTTGGATTGCCAATATCTGCTACACATACACTTGTTGGTGCAGTGATGGGAGTGGGATTTGCAAGAGGGCTCAATAGGGTCAGAGCAGAGACAGTGCGTGAAATTGTGGCCTCCTGGTTAGTCACAATTCCAGTTGGTGCTGTGTTATCTATCTTCTACACATTGCTCTTCACAAAGATTCTGGCATACTTTATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008528