BGIOSGA008544

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Revision as of 03:16, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008544| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008544, complete gene.| tag = OsJ_073...")
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Gene Name

BGIOSGA008544

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008544, complete gene.

LocusTag

OsJ_07378

Ensembl Transcript ID

BGIOSGA008544-TA

Ensembl Protein ID

BGIOSGA008544-PA

Length

3814

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24934097..24937910

Sequence Coding Region

24934097..24934143,24934246..24934483,24934597..24934821,24935422..24935568,24936221..24936313
,24936731..24936850,24937109..24937219,24937292..24937417,24937537..24937635
,24937830..24937910

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24934097..24937910 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24934097..24937910 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGCCTCCCGCCCCGCCGTCGTCATCGACAACGGCACCGGGTACACGAAGATGGGGTTCGCCGGGAACGTGGAGCCCTGCTTCATCACCCCCACCGTCGTCGCCGTCAACGACACCTTCGCCGGCCAAACCAGGGCCAACACCACCAAGGGGAACTGGATGGCGCAGCACAGCGCCGGCGTCATGGCCGATCTCGACTTCTTCATCGGGGAGGACGCCCTGGCCCGCTCCCGCTCCAGCAACACCTACAACCTCAGCTATCCAATTCACAATGGCCAGGTTGAGAATTGGGACACCATGGAGAGGTTCTGGCAGCAGTGCATTTTCAATTACCTGCGGTGTGATCCGGAGGATCACTATTTTCTGCTCACCGAGAGCCCCCTGACTCCTCCCGAGACCCGCGAGTACACCGGGGAGATCATGTTTGAGACTTTCAATGTGCCTGGTCTGTACATAGCGTGCCAGCCGGTTCTTGCCCTCGCAGCAGGATACACCACCACAAAGTGTGAAATGACAGGTGTTGTAGTCGATGTGGGTGATGGGGCTACCCACATTGTTCCTGTTGCTGATGGTTATGTTATAGGAAGCAGCATCAGATCAATTCCAATTACAGGCAAGGATGTTACCCAGTTTATTCAGCAACTCTTAAAGGAAAGAGGTGAGCACATTCCACCAGAAGAATCTTTTGATGTGGCAAGGAGAGTGAAAGAAATGTACTGCTATACATGTTCAGATATTGTGAAGGAATTTAATAAGCATGACAGAGAGCCCAATAAGTACATAAAGCACTGGAGTGGCATCAAACCAAAAACTGGTGCCAAATACACCTGCGACATTGGGTATGAACGCTTCCTAGGGCCTGAGATTTTCTTCCACCCTGAGATTTACAACAATGACTTCACCACTCCTTTGCATGTAGTTATTGACAAGTGCATCCAATCATCCCCAATTGACACAAGAAGGGCTCTTTATAAGAATATTGTCTTGTCCGGGGGATCAACTATGTTTAAGGATTTCCACAGGAGGCTGCAGCGGGACCTAAAAAAGATAGTGGATGCACGAGTCCTTGCATCTAATGCTCGACTTGGTGGAGATGCAAAGGCCCAACCTATAGAAGTAAATGTAGTTAGCCATCCTATTCAAAGATATGCTGTCTGGTTTGGTGGTTCTGTGCTTGCCTCTACCGCTGAATTCTACGAGGCTTGCCACACAAAAGCAGAGTATGAAGAGTATGGCGCAAGCATCTGCCGGACGAATCCTGTTTTCAAAGGGATGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICRTNPVFKGMY</aaseq>

Gene Sequence

<dnaseqindica>1..47#150..387#501..725#1326..1472#2125..2217#2635..2754#3013..3123#3196..3321#3441..3539#3734..3814#ATGGACGCCGCCTCCCGCCCCGCCGTCGTCATCGACAACGGCACCGGGTAAGCCTCCCTCTCTCTCTCTCTTTCCAGATCTGCGCGCGGAGAGCGTGCGCCGCGGCGAATCTGAGGCGGGTGATGAGAATGGGTGGCGCGCGCGCGCAGGTACACGAAGATGGGGTTCGCCGGGAACGTGGAGCCCTGCTTCATCACCCCCACCGTCGTCGCCGTCAACGACACCTTCGCCGGCCAAACCAGGGCCAACACCACCAAGGGGAACTGGATGGCGCAGCACAGCGCCGGCGTCATGGCCGATCTCGACTTCTTCATCGGGGAGGACGCCCTGGCCCGCTCCCGCTCCAGCAACACCTACAACCTCAGCTATCCAATTCACAATGGCCAGGTTTGTGCGCGCGCGCGCGCGAGCGAGCGTTAATTTCCTCTTCTGACACTCTGCGTTGCTATCTTAGTTTGCGGAGCTTCATTTACTCAAGCTGATATGGGCTAGATATTCAGGTTGAGAATTGGGACACCATGGAGAGGTTCTGGCAGCAGTGCATTTTCAATTACCTGCGGTGTGATCCGGAGGATCACTATTTTCTGCTCACCGAGAGCCCCCTGACTCCTCCCGAGACCCGCGAGTACACCGGGGAGATCATGTTTGAGACTTTCAATGTGCCTGGTCTGTACATAGCGTGCCAGCCGGTTCTTGCCCTCGCAGCAGGATACACCACCACAAAGGTTAGTAGAGCAAGAATTCCTTGAGATAAGAACATGAATTTCGTTCTCAAGGCCATGTTTATGTTGTAGTTGAACTGTTTTATTACACGCTTTCAATATGCAATATTTCTGCTTAACCTTAATTTGATAGGTGAAAGAGACTACATTATTGAAATATTTACGTTTCCAATAAATTTTAATTCTATAGTGGTTTTTCTGTTTCATTTGAAAGCTCATTGTGTTGGCATCTTATTTCTAGCCATGCATGGACTCTTGAGCTTCGTAGTTGTGCTTAGTTTGCTCTACAATACTCCTTCCATCCCACAATACTGTCTTTCTGGTTTGTTTAGCACAAATTAAGGTTTAGCAATCAAAGACTAAAGTGCCCCTCATTTGAATGGAATTGTGAGGTTGTTGAGGATAGAATGTGTAGAAATTTGAATAGGAGGTGATTGATTGGACATATAGTACTCTTAAGTGACAAGTATTGTGGGATAAATTTTAAACCCTAAAGAGACAACTATTTTGGGACGGAGGAAGTACTACATTATTTGCCCCTCTTTTTTCCTTTCGTCTATGTTGAGAGATATATTTATGAGGAATTTCATGCTTTGTTTTCAGTGTGAAATGACAGGTGTTGTAGTCGATGTGGGTGATGGGGCTACCCACATTGTTCCTGTTGCTGATGGTTATGTTATAGGAAGCAGCATCAGATCAATTCCAATTACAGGCAAGGATGTTACCCAGTTTATTCAGCAACTCTTAAAGGTAGTTACCATTGCTTTCTTGTGGGCCGTCACAAGATAGTACTTAACCTTCTATTTGTCAACAGATGTCACTGATCTTACATTACTGTGGATCTATGCCTTTGAGAGTCCAAATGTCCATCATAACTGCACAAGGAAATCAAAGATTCATGAAAATAACAGCCACAAATAATGAAAGGGATAAAATGCATGAAATAGAGGTAGAATTGGTGGAAAGTAACTGTCAATTTTTATCTAATGATGCACAATAAATTCCACTCAAAGTTTTACAAGCAACTCCAGCCTGCAGCTGCAATCATGCGCCATGGCAAATTTTGTAAACACACCTGAGATTATTTGAGTCACCTCACCGTGGTTGTCAAATAAGCATATCAAGTATATCATTCTGAACAAATGAATACACATGGTTAAGATTAGAGGACAAGCTGAAATTATCGTTACCTGTATGTGATGAGAGAGACAACTTCTCTTCTTGTGCCATTTAACCTGCATGTGAAATTGACTTGGGACTTGGGAGTGTGATATATCAAGAAAGGATATATAAATATATAACAAGTTTACCTCATAATTTTCTTGAGATTTTCATATTTTATATAGCGAATCTGCATAATGGCAGTGCACTTATAAGTCACTGAGCCAATTAGTTCTTGCAGGAAAGAGGTGAGCACATTCCACCAGAAGAATCTTTTGATGTGGCAAGGAGAGTGAAAGAAATGTACTGCTATACATGTTCAGATATTGTGAAGGTATTAACTACTACAATAAATACATGAACTGTCAATTATTGAAACATGGATAGTATATGTTCTCGTTTATTCTAGGATGAGTGTTACTTCAAAAGGAAGGATTGCTTTTACCTCATAATAGCATTGCAGTTGACTGACTGTCACAGTTATAGCAGCCTAGGCATTGGCATTTAAGGCTTACCCTGCCTGGAATCTAATTTTGTAAAGCACTGTTCCAGCATGCTTGATGTCAAACAATGCATCTGCTTTCCTCTGATTCACTTTTTCCTGCAACTGGTGATTGTTTTCAGTATCGAATATGTTGTCTCGGTTCTTCCCAGCTTTGAACCATTGACTTTGTTATTTGTACGACAAAAAATAGAGTCCCTAAGAGATGAAAAGAAAAATAATAATATAACTTTATTGTTGCCTTTTTAGGAATTTAATAAGCATGACAGAGAGCCCAATAAGTACATAAAGCACTGGAGTGGCATCAAACCAAAAACTGGTGCCAAATACACCTGCGACATTGGGTATGAACGCTTCCTAGGGCCTGAGGTAATTGATTTTGCATTAATGTGTTCACCATTAACTGTGGCTTCTACAATGTAACATTTGATTTAGGTTCAAAACTTAACTGCGATCATAATTTAACTCCAATTCATGGATAAACCAGTTTGAGTTCAGGCTTTATGTTCATAAATATAACTGCTTTGTACATGATATCTCTAGTAGTTCTGATGCATTTTCTAACTAAACATTTTGATTGCACTATCATTTTAATCTAATTTCCCCACGTTGCTGTGAACCATGCAGATTTTCTTCCACCCTGAGATTTACAACAATGACTTCACCACTCCTTTGCATGTAGTTATTGACAAGTGCATCCAATCATCCCCAATTGACACAAGAAGGGCTCTTTATAAGGTTTGTGTTATCAAAATGCCGTCTTATGATTCAAAATATCACAGTGGTTCTGAGTTTCATTTTATTGGACAGAATATTGTCTTGTCCGGGGGATCAACTATGTTTAAGGATTTCCACAGGAGGCTGCAGCGGGACCTAAAAAAGATAGTGGATGCACGAGTCCTTGCATCTAATGCTCGACTTGGTGGAGATGCAAAGGTACAAACTTTTCATGTTTGCTCTGGCTCTCTCCTGATTGCAGAAGAACACTGGCCAAACCAGAAACTTTATTGTGATATTGGAACTTGGAAGCTACAGCTACATTCTGTTTATTTCAGGCCCAACCTATAGAAGTAAATGTAGTTAGCCATCCTATTCAAAGATATGCTGTCTGGTTTGGTGGTTCTGTGCTTGCCTCTACCGCTGAATTCTACGAGGTATTCAAACTTCTATTTCTATGTACAGTAGTAATGAACACTCATATCACTTGAAACTAGTGCATAGCGTTTACTTTTGCAAGTTGTTTCCTAAGCTTAAATTTTTTTGTTGGAATATATCCCCATATTCGGGGTTTCTTTTTCCTTTTTCCATTTTAGAAATTAAAGCTAATTCTGGTAGTTTTCCCAACCAGGCTTGCCACACAAAAGCAGAGTATGAAGAGTATGGCGCAAGCATCTGCCGGACGAATCCTGTTTTCAAAGGGATGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008544

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008544&oldid=62096"