Os09g0400000

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0400000| Description = Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)| Version = NM_001069645.2 GI:297609423 GeneID:4346989| Length = 1793 b...")
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Gene Name

Os09g0400000

Description

Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)

Version

NM_001069645.2 GI:297609423 GeneID:4346989

Length

1793 bp

Definition

Oryza sativa Japonica Group Os09g0400000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14640620..14642412

Sequence Coding Region

14640776..14641778,14642183..14642265

Expression

GEO Profiles:Os09g0400000

Genome Context

<gbrowseImage1> name=NC_008402:14640620..14642412 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14640620..14642412 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcatggcaaggcggctgtcggctgggcggccagggacgactccggcgtcctctccccgtacaacttctccaggagggctcagaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacaccgacctgcacgtcgtcaagaacgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtgggcgtgggcttcttcgtcgggtcgtgccgcacctgcgacagctgcggcaaggggtacgagaactactgcccgacgatggtgatcacgtcgaacggcaaggactacggcggcgcggccacccagggcggcttctccgacgccatcgtcgtgaacgaacactacgtgctccgcgtgccggcggggctgccgctggacggcgcggcgccgctgctgtgcgccggcgtgacggtgtacagcccgatggtgatccacgggctgaacgcgccggggaagcacgtcggcgtggtcggcctcggcgggctcggccacgtcgccgtcaagttcgccaaggcgttcgggatgcgcgtcaccgtcatcagcacgtcgccggggaagcggcgggaggcgctggagcacctcggcgccgacgagttcctcgtcagccgcgacgcgggccagatggcggcggcggcgggcaccatggacgggatcctcaacacggtgtcggcgtggcacccggtcgcgccgctgttcgcactgatgaagccgatggcgcagatggtgttcgtcggcgcgccgaccaggccgctggagctgccggcgtacgccatcgtcccgggagggaagggcatcaccggcaactgcgtcggcggcatcagggactgccaggccatgctcgacttcgccggcgagcacggaatcaccgccgaggtggaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtccgctaccgcttcgtcatcgacgtcgccggcagcagcctcggcggctccggcgacgacaagatataa</cdnaseq>

Protein Sequence

<aaseq>MEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGI CHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCD SCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLL CAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREA LEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPT RPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMER LEKNDVRYRFVIDVAGSSLGGSGDDKI</aaseq>

Gene Sequence

<dnaseqindica>635..1637#148..230#ttgccattctccagcaccagcagcaagcttcttcttcagcaactcagcagcacttcacctgctgctgctgcgaccgccgtgaccatcaccacctcgtcgccggcgagaaacctgcagagggcgagggcgagtgcggcggagcaggggatggaggagcatggcaaggcggctgtcggctgggcggccagggacgactccggcgtcctctccccgtacaacttctccaggaggtcagtgagaaaatttttaccgtgattttgtagttggagaagatgccttttctctctgtttctgtgtggatgagttgtttaaagattcagatcctataggctatagctaggagaatggatagatcaagatagtttagctgtcagatcagtacaagtgtcagttagaaatcagcagtcaaagaagtcaagaacaagagccgattctttattttacattatctgaaagttttagatggtttttcacttgatctatggacttttgattaatttggcagtaaattatattctataatctggagtagtgttcaatttgctactgtatgaggctatgaactgtcacttttaaggctaatctgtctgatggataatcttatcagctgctgctgctgacaaaaacatttcagggctcagaaggacgatgacgtcaccatcaaggtgctctactgcggcatctgccacaccgacctgcacgtcgtcaagaacgattggggcaacgccatgtaccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtgaccaagttcaaggccggcgacacggtgggcgtgggcttcttcgtcgggtcgtgccgcacctgcgacagctgcggcaaggggtacgagaactactgcccgacgatggtgatcacgtcgaacggcaaggactacggcggcgcggccacccagggcggcttctccgacgccatcgtcgtgaacgaacactacgtgctccgcgtgccggcggggctgccgctggacggcgcggcgccgctgctgtgcgccggcgtgacggtgtacagcccgatggtgatccacgggctgaacgcgccggggaagcacgtcggcgtggtcggcctcggcgggctcggccacgtcgccgtcaagttcgccaaggcgttcgggatgcgcgtcaccgtcatcagcacgtcgccggggaagcggcgggaggcgctggagcacctcggcgccgacgagttcctcgtcagccgcgacgcgggccagatggcggcggcggcgggcaccatggacgggatcctcaacacggtgtcggcgtggcacccggtcgcgccgctgttcgcactgatgaagccgatggcgcagatggtgttcgtcggcgcgccgaccaggccgctggagctgccggcgtacgccatcgtcccgggagggaagggcatcaccggcaactgcgtcggcggcatcagggactgccaggccatgctcgacttcgccggcgagcacggaatcaccgccgaggtggaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtccgctaccgcttcgtcatcgacgtcgccggcagcagcctcggcggctccggcgacgacaagatataaaataaagctcgccggcgccgcctagcttgcttgttgtgtgtcagtggccttgaatgtttggtgatgtgcaaactagctacgaaatggagtacgaaataagtggagcttatgtctctatcacttcgttattaattagtcgagctagttaattgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0400000, RefSeq:Os09g0400000