BGIOSGA008549

From RiceWiki
Revision as of 03:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008549| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008549, complete gene.| tag = OJ1212_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008549

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008549, complete gene.

LocusTag

OJ1212_D02.6

Ensembl Transcript ID

BGIOSGA008549-TA

Ensembl Protein ID

BGIOSGA008549-PA

Length

3465

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25007494..25010958

Sequence Coding Region

25007494..25007587,25008181..25008289,25008393..25008585,25008706..25008842,25009178..25009466
,25009565..25009671,25009748..25009892,25010117..25010315,25010395..25010638
,25010718..25010958

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25007494..25010958 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25007494..25010958 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCGCCGTCTGGGATTCGGGCATCTGCCTGGAGCTTCTTCAAGTTCCTGCCTTTCTTCCTTGGCCTTCTCCTCCTGGGGATCATCAAAGGTGCTTTGCTCTTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTGTGCATGTGATCTGGACATACTACTGCATCATCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCTTGTCGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGAAGGAAAAGAAAGACCACTATACCACTGTTTTGTGGATGGAACATGGAGTACTATAACAGGAAGCTGTACAGTAGTTAGGGACCTGAAAGATTTATTATTGCATTCATATTTTTCAATAATGGATGACCTTCGTTTTCATGCACCTCCTGGAGGAGAGCCATATGAAATAAGAGTGCTTGACATTCCTGGTGCATTATTCGCTGCTGCGTGTGGATTTCTAGTGGATGGAATAATGTTCACACTAATTGCCTTCTACAAGTTCCCTGTGATGCTTTTCAAAGGATGGAAGCGGCTGATCGAAGACTTAGTTGGCAGGGAAGGACCTTTCCTGGAGACAGCTTGTGTGCCATTTGCTGGTCTTGCTATTCTTCTGTGGCCATTTGCTGTTTTTGGAGCTTTTCTAGCCTCCATCATCTCCAGTATTCCTTTAGGTGCTTTTGCTGCTGTTGTGGTTTATCAGGAATCCTCGCTTATCATGGGACTAAATTATGTAATATCATCAGTGGCCATCTTTGATGAATATACAAATGATGTGCTTGACATGGCACCAGGATCCTGCTTTCCCAGGTTTAAATACCGGAAAAATGAAGCTTCGACAGAGGGTGGTTCGTTATCAAGGCCTGCCTCATTTAAGGACAGACAAGACGGGAAGAAAGCTCCATCACGTGTTACATCGTTTAAGGGCAGCTTTGATGAGTTCAATCCATTTAAGTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTGAAGGAGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAGTACTTAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MEPPSGIRASAWSFFKFLPFFLGLLLLGIIKGALLFPWAWLIMMIGISALVLGLWPVHVIWTYYCIIRSKLVGPVVKLLLLVAASVILVLWLIVGIVGSVLIGVVYGFLAPVMATFDAVGEGKERPLYHCFVDGTWSTITGSCTVVRDLKDLLLHSYFSIMDDLRFHAPPGGEPYEIRVLDIPGALFAAACGFLVDGIMFTLIAFYKFPVMLFKGWKRLIEDLVGREGPFLETACVPFAGLAILLWPFAVFGAFLASIISSIPLGAFAAVVVYQESSLIMGLNYVISSVAIFDEYTNDVLDMAPGSCFPRFKYRKNEASTEGGSLSRPASFKDRQDGKKAPSRVTSFKGSFDEFNPFKLLDHLFEECKHRGEVLVAEGVITPKDIEETKSGKIGIGVLNVGLPAYVILHALIRSAKANSDGLILSDGSEITSDNRPKNTIFDWFFDPLMVIKEQIKAQNFTEEEEAYLKKRVLLTSDPKRLKEVVPHLPSSLNERKQAEIDALSRRLQGITRSISRYPTAKRRFDDLVRSLSEELERTMGGSQSGSVSQMQKLRSGISRMLSQRSMGKRTSNRGDDREAQLTIDP</aaseq>

Gene Sequence

<dnaseqindica>1..94#688..796#900..1092#1213..1349#1685..1973#2072..2178#2255..2399#2624..2822#2902..3145#3225..3465#ATGGAGCCGCCGTCTGGGATTCGGGCATCTGCCTGGAGCTTCTTCAAGTTCCTGCCTTTCTTCCTTGGCCTTCTCCTCCTGGGGATCATCAAAGGTGAAGAGAAAACACTGGTTGTATTGGTTCATCTTGTTTGGTTGCTTCTGTTTGTTTGTGCTAAGAAAGTATTGTCATGAGAGTATTAGAGGAGAACTTCACATAGCAGTGTCTCTGTAATTATGTACTGTGGAATTGTGGCGCATTTGTTAGTTTTTGATCAGAATGGCAAGCCGAAGATCTCTCTGGGTGACCCATTTGCATTTTCCTTGCATTAGGGTAGTTTGGTTGAGTGGGTTGGAATTGGAATCGCTCAGAGGATGTCATTGTTTTCCTTTTTCCTTCTTTTTTGGCTGATTAGTTAAAGTTTTTTGGATTTTAGCCTCTCTTTTTTTTTTTTTGTTCTGGTTCAGCTGGAGTTCGTCACTTGCACTTCATTTAGACTGATTGCAACTGTCCATTGCAAAAGGGCAATTGAAGTACGGTACTAGGTATCTGTAAATTCCAGAATGCAAAATCGTTGTACGAACTTAAATGCCTTTTCAGCATATGATCAAATACTACTTAGTAATTTTTGCCGTCCCATGTTCCCATTTTTGAACCTCAGATTCTGACTTGCAATTCCTCCCTACGTGTTAATTTTGCCTATGCAGGTGCTTTGCTCTTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTGTGCATGTGATCTGGACATACTACTGCATCATCAGGTTTAGGATTCACAACTCAGTACAGATCCGTTCCAAAGAGAATTACCACATAATTATGAAAACTGTACTTATATATGCTTGTCATCTTTTTTTCGGAAAGCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCTTGTCGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGAAGGAAAAGAAAGACCACTATACCACTGTTTTGTGGTACATTTTCCTTTTCGTTGATTTACTCTGGCATTTTCCTTGTTCTTACTTCTAAAGATTTATTCCTTCGAAAAAATAACTTCTCAAGTTCTACATCGGTATATGCAACTTGAAATGCAGGATGGAACATGGAGTACTATAACAGGAAGCTGTACAGTAGTTAGGGACCTGAAAGATTTATTATTGCATTCATATTTTTCAATAATGGATGACCTTCGTTTTCATGCACCTCCTGGAGGAGAGCCATATGAAATAAGGTTTGTTTTCTCCTTTTAAGGTTGCATTTTATTGTCAGGACATGGAATCTTCATCTAAGATTCTAACAGTGCAACCTTCTCATGAATTCAGTTATTGTTTTTGCTATCTGGGACCTTTGTTCTTACATGCATGAATAATTAAGGTTTGCAATAGATTTTGAACTGAAACCTTAATTTACAATGATATGTGGGAGTTTTCCCTCATAAATTTAACTTCACCACGCTACAATTTCAAAATTGGTGCTGTTTATATTTATTTCTGAATGCCCGCCTTGATCTTATTTTCTTGAAGAATTCCATATAACAAAGTCAAATAATACTTCTACATCTCCCAGAGTGCTTGACATTCCTGGTGCATTATTCGCTGCTGCGTGTGGATTTCTAGTGGATGGAATAATGTTCACACTAATTGCCTTCTACAAGTTCCCTGTGATGCTTTTCAAAGGATGGAAGCGGCTGATCGAAGACTTAGTTGGCAGGGAAGGACCTTTCCTGGAGACAGCTTGTGTGCCATTTGCTGGTCTTGCTATTCTTCTGTGGCCATTTGCTGTTTTTGGAGCTTTTCTAGCCTCCATCATCTCCAGTATTCCTTTAGGTGCTTTTGCTGCTGTTGTGGTTTATCAGGTAGCCACTTGCTGACCGTGAATATTTTTTTTTCACTTCTAGTATAAATTGATCTGTCTGAGGTGAATTCATGAAGCCTAACCATGTCTCTGTGCCAGGAATCCTCGCTTATCATGGGACTAAATTATGTAATATCATCAGTGGCCATCTTTGATGAATATACAAATGATGTGCTTGACATGGCACCAGGATCCTGCTTTCCCAGGTATGCACGATGCTCTTTATGTTTTGAATCCTCCTTGTCTGAATGATACAAGCTAACTCTAACATTCTATTACTAGGTTTAAATACCGGAAAAATGAAGCTTCGACAGAGGGTGGTTCGTTATCAAGGCCTGCCTCATTTAAGGACAGACAAGACGGGAAGAAAGCTCCATCACGTGTTACATCGTTTAAGGGCAGCTTTGATGAGTTCAATCCATTTAAGGTGATCTCTTCTAGGCTAAAATTGGCAGATTTTGTTGAATCATTCTACTATATTAGGAGGGGCAACACCTGTTCAGACTTCTAGAGATTACACTATCCTGCTCGATCATCCCATTTTCACTTCTCATTTGCACATCCCATGAAAGTCTGCTTTAGACTCGTGCAAATCTGTCTGATTGATTTTTTGAATGAAAAAAAAAATATCTGATTGATATTATGATTTAGTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTGAAGGAGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAGTACTTAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTAAGTAATAAAATAGTTTTTCATATTCGAAAACAGGTGCTATGACTTTGCTTGACTCACCTTTTGAAATATTATGCAGGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGGTACTTCTGTTCATCACCCTTCCTGTTTTTTACCAACTAAAGTTCTTTTTTTTCTAATCTGTTTTTAATCCTATGCAAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008549