BGIOSGA008557

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Revision as of 03:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008557| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008557, complete gene.| tag = OsI_079...")
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Gene Name

BGIOSGA008557

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008557, complete gene.

LocusTag

OsI_07938

Ensembl Transcript ID

BGIOSGA008557-TA

Ensembl Protein ID

BGIOSGA008557-PA

Length

5813

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25096496..25102308

Sequence Coding Region

25096496..25096622,25096911..25097232,25098486..25098612,25098701..25098770,25099724..25099881
,25100377..25100434,25100886..25100962,25101060..25101112,25101285..25101339
,25101634..25102308

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25096496..25102308 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25096496..25102308 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTAGTAAAGCTAGGATTGCCTTTCCGAGGTCACGATGAGTCAAAGGAGTCCTACAACAGAGGCAACTTCAGGGAATTTCGTGATTACACAGCGGAGCAAAATCCATCCTTAAGAAAGGCAATAGAACTAAAGCTAAGTCTAAAGCAAGTTAGAGGGCAAGGATATGACGGTGCTAGCAATATGCGAGGTGAGTTCAATGGTTTGCAATCATTGATCATGAGGGAATATAGTTCAGCTTATTATGTTCACTGTTTTGCTCACCAACTCCAATTGGTTCTTGTGGATATTGTGAGAAAACATAAAGACGTTAGTGATTTTTTTACTAAGATTTCCATCTTACTGAATGTGGTGGGTGGATCATCTAAGAGAAGGGATTTGATTAGAGATATTAATGTTAAAGAAATGAGTAAGGCATTGGGTTCTGGGCAACTTCAAACTGGAACCAGCAAAGCAAGTTCCGCTATGGGTAACAGCCTTCCTGTAGAATCGAAGTTCACTTTTGAAGAAGAGAATGACAGAATTAAGTATGTTGTGTCGTCTATGCAAGGATGGGGTGAGAAAATGGAAGATGCTCATGCAGCTATTCTAAATCTTGATGATACCACGTCCACGTCTTTCTTTGGTGTTTATGATGGCCATGGAGCTGCACTTGGAAATGTGGGATATCATTGTTCGTGTGATTGCTGCAGCATGGATGAGAACCTGCAACAGTCCGATGCTTGGAGAGAGTTAGTTATTCCTCATGATAATGGATGTATGTATTTTCTCAAGGCTGGTGTCTGTGCTAAGCCTTTCCCACAGGCGACATATACTGGGCCAGCGTATGAAGGGAGCACAGCATGTGTGGTTGTCATCAGAGGTGACTTTGCTTTCAAGAAGAACAAAGATTTAGATCGTGAAAAACAAATGCTGGTACGTGATCCGGACATCCTCGCTGATGACATAACTGATGACATGGAGTTTCTTGTTATTGCAAGTCAAGGTCTCTGGTCTTGCGTGGACAGTGCGGACGTGGTTTCTTACATACATGACCGTTTATCGGTGGAGGGTGCAGAGCTGCGTGTCATCTGTGAGGAGGTTGTTGAGTTCGGCTTGGCATCGGGCGAGAACACTACCGTCATCCTGGTTCAGTTCAAGCCCGGCGCCTTCCAGTACCAGCTGGTGGATCCCGCTGGATTTGGCACTGCCGTCTCTAACATTGCCAGCACCAGTGCTGCGCCGGCTGGTGCCAGCGACACAAGCGACGAGGGCGTCATGGCCGACTCCAGCGCCACGGCTGACACCAGCGGCAGTGCCAGGGCTGAGAGCGGCGAGCTCGTCCCCACTCCCAGCGCCAACAACACCGTCACGGATGAGGTCGATCCCACTGGCACTGTCGCAGCCGACGACAAGGTCGATCCCAACTCCAGCGCCAATGCCGACGCTGACGACGGCGCTCCCAAACCTTCTCTCGGCGCAGTCATCGAGTCCGACGAGGTCGCCCTCGATGCCACTGCAACGGGCCATCAGGTGGCCGTGCGTCAGCAGGAGGAATTCGACCCAAGGAAGTGTTGGATCTGCGGAAAAGGCTACAAGAAGATTCTTCTTGAACCTTCTTCGGCCAGGGCGAGAAACCCACTTATGGCTCACGCTAAGACGTGTGAGTCGGAAGACAAGAAGGCGAAGAAGAAGATAACCAAGTATATGATGAAAGCCAACGTCACCAACCAGTATCATTGA</cdnaseq>

Protein Sequence

<aaseq>MLVKLGLPFRGHDESKESYNRGNFREFRDYTAEQNPSLRKAIELKLSLKQVRGQGYDGASNMRGEFNGLQSLIMREYSSAYYVHCFAHQLQLVLVDIVRKHKDVSDFFTKISILLNVVGGSSKRRDLIRDINVKEMSKALGSGQLQTGTSKASSAMGNSLPVESKFTFEEENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTTSTSFFGVYDGHGAALGNVGYHCSCDCCSMDENLQQSDAWRELVIPHDNGCMYFLKAGVCAKPFPQATYTGPAYEGSTACVVVIRGDFAFKKNKDLDREKQMLVRDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASGENTTVILVQFKPGAFQYQLVDPAGFGTAVSNIASTSAAPAGASDTSDEGVMADSSATADTSGSARAESGELVPTPSANNTVTDEVDPTGTVAADDKVDPNSSANADADDGAPKPSLGAVIESDEVALDATATGHQVAVRQQEEFDPRKCWICGKGYKKILLEPSSARARNPLMAHAKTCESEDKKAKKKITKYMMKANVTNQYH</aaseq>

Gene Sequence

<dnaseqindica>1..127#416..737#1991..2117#2206..2275#3229..3386#3882..3939#4391..4467#4565..4617#4790..4844#5139..5813#ATGCTAGTAAAGCTAGGATTGCCTTTCCGAGGTCACGATGAGTCAAAGGAGTCCTACAACAGAGGCAACTTCAGGGAATTTCGTGATTACACAGCGGAGCAAAATCCATCCTTAAGAAAGGCAATAGGTACAAAAAAATCAAATAACAGTCTTTTGGTTGCTCCTGAAATACAGAGGGATATCGTGAAATGTTTTGCAAAGGAAGTGCTACATGCTATTCTAGAAGAAATTGGGCATGATGTTTTTTGCTTGCTAGTTGATGAATCAAGAGATGTTTCTTGCAAAGAACAAATGGTAGTGGTCTTGAGATATGTTGATAAATAGGGAATTGTGAGAGAGAGATTTATTGGTCTTGTCCATGTGACTGAAACAACTTCTGCCTATCTCAAGTTTTCTATTGATGCTCTATTTGCAGAACTAAAGCTAAGTCTAAAGCAAGTTAGAGGGCAAGGATATGACGGTGCTAGCAATATGCGAGGTGAGTTCAATGGTTTGCAATCATTGATCATGAGGGAATATAGTTCAGCTTATTATGTTCACTGTTTTGCTCACCAACTCCAATTGGTTCTTGTGGATATTGTGAGAAAACATAAAGACGTTAGTGATTTTTTTACTAAGATTTCCATCTTACTGAATGTGGTGGGTGGATCATCTAAGAGAAGGGATTTGATTAGAGATATTAATGTTAAAGAAATGAGTAAGGCATTGGGTTCTGGGCAACTTCAAACTGGAACCAGGTTGAATCAAGAGCAATGTCTTCAGAGACCTGGGGATACTCGATGGAGTTCCCACTATAAAACTCTCAAAAGTTTGGTTGGCATGTTTGCTACAATAGTCAAAGTGCTAGAAATTGTGGAAAAAGACAAAAATGATTGGAAAATTAGAGATCAAGCATCGAATCTTTTGGAGTACTTCCAATCTTTTGATTTTGTCTTCTATTTGCACCTCATGTTAGACTATATTAACAATCACAAACAGCTTGTCACTAGCATTGCAACGGAAGGATCAAGACATACATAGTGAATGCTATGAAATGTGTAAAGTCAACTAGGCTCAATTTGGATGAGCTTAGAAGAGAAAAGTGGGAGAAAGTTCTAGATGAAGTCTCTGACTTTTGTGATAAGTATGATATTGTCAAATTGGAAATGGAAGATACATATATTGATCCCAAGAAGCATAGGCACAAATCTGGAATTACAAACAAGCATTACTATCAAGTGGATTGTTTTAATGATGTTATTGATTGGATACTTCAAGAGCTTGACAATCGCTTCAGTGAGACAAGCTCTCAACTGCTTATTTGCTCATCGGCTTTTAGTCCAAGAGACTCATTTCATGATTTCAATATAGAGAATTTGATGAGTTTAGCAAAATTGTATCCTAGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCGTACTGTACTGGTAGGTTGTTCTTGCTTTTTTTCTTCTGTTCTTCATTCTCTGTTTGCAATTGTTTAAGTTTTGATTCGCCGAAGCAGTGCCATATCTAAAGGAAATCGAACATCCTTGTACAGTACACTTTATGTGCTCGTTTCCTCTTATTTTCTCACTTTGAAATTTGGTGTTATGATATGTGTCAGTAAAGCTTATATCGCGTTTGTAGAAAACCTTGTGTGTATTTTGTTCGCAGTAATAAAATAAGATTTAGGTGTAAAATAATGCAGCACTGCAACTGAAGATTGATACTTCCATGTTATATATCTCAAAAATGCATTTAAGCATTTAAGGGCCCTGAATGAAAGCACCAATTACACCCAATTACACCCTGTGCTTTGAGCTAGATAAGTAGTGCCATATCAAGTTTGATGATTCTACTTCACTTTATTTCATATGTAACCTAGCTTTCTGGCATTTAATTGATCTGTATTATTGTTTAAGTGTCTTTCCCCGTTTTTGTTAATAATGTTATTTTATATTTGTATTCATGTTAAATTTTCAGCAAAGCAAGTTCCGCTATGGGTAACAGCCTTCCTGTAGAATCGAAGTTCACTTTTGAAGAAGAGAATGACAGAATTAAGTATGTTGTGTCGTCTATGCAAGGATGGGGTGAGAAAATGGAAGATGCTGTGAGTAAACTTGCAGCCTTTTGTATGACAAAAAAAGGGACAGTTCTGCAAAATACTGTGACTGACATATGCCCTCTATATTCTCTAGCATGCAGCTATTCTAAATCTTGATGATACCACGTCCACGTCTTTCTTTGGTGTTTATGATGGCCATGGAGGTTTGCTTTCATTCTCATTTTTTTTTTAATTTCAAACCCTCCAAATTGTTGGCGTAACTGTTATGTCATGCTATGTTTGTCTGTGTGTATCACTTTGTTATCTCTGCGCATGTTTTGAAAACTTTGTTGTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCACTTGGAAATGTGGGATATCATTGTTCGTGTGATTGCTGCAGCATGGATGAGAACCTGCAACAGTCCGATGCTTGGAGAGAGTTAGTTATTCCTCATGATAATGGATGTATGTATTTTCTCAAGGCTGGTGTCTGTGCTAAGCCTTTCCCACAGGTAGTAATCTTTTAACCCCTAGCATCCTCAAATATTCATATCGTGAAGAAGTTACTCAAAATTGTATTTGTTGGACAGTGTGCATATTGTATCTATGAAAAAGGAAATGGAAGAATGTGTTTGATATCGAGACTGTTGTTCTTTCTTGTGATGTACTTTGGAGTTGGAGGAGATATGTTTAACCCTAATCTCGACTAATTGCTCCTATTAAAAAAGGTTCAATTAGTTACATATCAATTGGCTGGTTTACTGAGTTGGAGGCCAACAGGTTCTTAAGTTCTCATTGCACCTTGGTTCTTATCATACTATGCTATCCAAATTGAGGTATTGTTTGCGATATCCCTTCGATGGTTATTTCTTTCATACATTAGTTTGGTTTTCAGAAATGTTTTTCTATACCTGTTGGCTTTCTTGAGCTATTTTTTGGTAGCCTTTTCCTTCTAACATGTTGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACATTGAGCTATGCAATCATGAAGACTATCACAACGATCTGATTAATGCACTGGACAATGTGTGTTTAAGGTTATTTTGGCCTACTTTACATAATTTGTTTATAGCTGCACTTGGAAATGTGGGATATCATTGTTCGTGTGATTGCTGCAGCATGGATGAGAACCTGCAACAGTCCGATGCTTGGAGAGAGTTAGTTATTCCTCATGATAATGGATGTATGTATTTTCTCAAGGCTGGTGTCTGTGCTAAGCCTTTCCCACAGGTAGTAATCTTTTAACCCCTAGCATCCTCAAATATTCATATCGTGAAGAAGTTACTCAAAATTGTATTTGTTGGACAGTGTGCATATTGTATCTATGAAAAAGGAAATGGAAGAATGTGTTTGATATCGAGACTGTTGTTCTTTCTTGTGATGTACTTTGGAGTTGGAGGAGATATGTTTAACCCTAATCTCGACTAATTGCTCCTATTAAAAAAGGTTCAATTAGTTACATATCAATTGGCTGGTTTACTGAGTTGGAGGCCAACAGGTTCTTAAGTTCTCATTGCACCTTGGTTCTTATCATACTATGCTATCCAAATTGAGGTATTGTTTGCGATATCCCTTCGATGGTTATTTCTTTCATACATTAGTTTGGTTTTCAGAAATGTTTTTCTATACCTGTTGGCTTTCTTGAGCTATTTTTTGGTAGCCTTTTCCTTCTAACAATGTTGTGATTCTGTGTTATATACTTCAGTTTGGTTGTTGTTTTCCCAGGCGACATATACTGGGCCAGCGTATGAAGGGAGCACAGCATGTGTGGTTGTCATCAGAGGTAACCAAATGATTGTTGGACATGTTGGTGATTCTCGTTGCGTACTCTCAAGACAGGGTGGCCTGGTATAGTGATTGTTTCCCTATTGAATTTCTGGTTAATACCTAATTTGCAAGCTCGTTCATTGTGGTGCCTAACATTTGTGCTTGTTTCCATTTTGTCAATAGGCTATTGATTTATCCTTCGATCACAAACCATGCACAAGAACTGAGTCTGAAAGAGAGAGAGTTCAAAATGCAGGAGGGAGATCTCTTGGACTTAGGTGTGAACAAAGTAATGGGGAATTATGTAGTCAAGGAACAATGGGTCCTCGGTGATTTTGGGGGAGGTGTAACAATCTCAAGATCAATTGGTATAGTCTTGTCTGGATCTGTTTTTCATTGATTGCATGTAATAGCACAAAAAGAAGCACATTACACTGTGATTGGCGTTTTACCTACTTACATTTCAGGTGACTTTGCTTTCAAGAAGAACAAAGATTTAGATCGTGAAAAACAAATGCTGGTACGTGATCCGGACATCCTCGCTGTAAGTGTAACTAAGTGTAAATAGGTCCGTTTGGTAGAATATGAAGTTCAGTTTTGCCGGGTTGGGATCTGATGGAAAATTGCCCTTTCAATGTCAGGATGACATAACTGATGACATGGAGTTTCTTGTTATTGCAAGTCAAGGTCTCTGGTAAGTGGTAACTCTTCAGCAAAAAATACCTGTCAATAACTATTGGATCATTTTTATGTCACCAGTACTCATTGGCATTCTCTTTTTTTTTTTTCCTCCTATTTGGTCATATATACTGTCACTCATAGTTCCATACTAATTGCATTGACTACTGTATATTTTCCCCCTGCAGGTCTTGCGTGGACAGTGCGGACGTGGTTTCTTACATACATGACCGTTTATCGGTGGTGAGTCTTTTCTTTCCCTCAGTTTGTCTTCTTGGCAGGACAAGATATCTTAGTGGTGTTAATCATGCTATCTGTTCTAGGAAATGACTTCAATCAAGCAATGTAAATATCCTGATTTTCTCTTTTCTTTTAAAAAAAAACTGTGTGAGCCCTAAACCTCACAAAACCATTTGTTAGTTTAGCACTGAATATGCATGCCTGGCTGACAAACTGCCATCTGCTTTGACTTCGATTCTTTCGCTGTTAAAACTGCTGTTACCAATAATGCTGTGACCAATTAATATTGCTATGCAGGAGGGTGCAGAGCTGCGTGTCATCTGTGAGGAGGTTGTTGAGTTCGGCTTGGCATCGGGCGAGAACACTACCGTCATCCTGGTTCAGTTCAAGCCCGGCGCCTTCCAGTACCAGCTGGTGGATCCCGCTGGATTTGGCACTGCCGTCTCTAACATTGCCAGCACCAGTGCTGCGCCGGCTGGTGCCAGCGACACAAGCGACGAGGGCGTCATGGCCGACTCCAGCGCCACGGCTGACACCAGCGGCAGTGCCAGGGCTGAGAGCGGCGAGCTCGTCCCCACTCCCAGCGCCAACAACACCGTCACGGATGAGGTCGATCCCACTGGCACTGTCGCAGCCGACGACAAGGTCGATCCCAACTCCAGCGCCAATGCCGACGCTGACGACGGCGCTCCCAAACCTTCTCTCGGCGCAGTCATCGAGTCCGACGAGGTCGCCCTCGATGCCACTGCAACGGGCCATCAGGTGGCCGTGCGTCAGCAGGAGGAATTCGACCCAAGGAAGTGTTGGATCTGCGGAAAAGGCTACAAGAAGATTCTTCTTGAACCTTCTTCGGCCAGGGCGAGAAACCCACTTATGGCTCACGCTAAGACGTGTGAGTCGGAAGACAAGAAGGCGAAGAAGAAGATAACCAAGTATATGATGAAAGCCAACGTCACCAACCAGTATCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008557

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008557&oldid=62109"