BGIOSGA008595

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Revision as of 03:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008595| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008595, complete gene.| tag = OsI_080...")
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Gene Name

BGIOSGA008595

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008595, complete gene.

LocusTag

OsI_08007

Ensembl Transcript ID

BGIOSGA008595-TA

Ensembl Protein ID

BGIOSGA008595-PA

Length

3764

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25557395..25561158

Sequence Coding Region

25557395..25557469,25558246..25559441,25559495..25560272,25560401..25560436,25560539..25560652
,25560871..25560939,25561024..25561158

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25557395..25561158 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25557395..25561158 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGAGGCGGAGGAGGCGTTCCCTCCGCAGAGGAATCCCCGCCGCGCGCGGCGCCGCGACCTCAACGCACTGGATCCCAGTTTAGAAGAGTCTGATGGAGAGGATATTGGTGTTCCAGAAGTTGGCATGGTGTTTAATAACCACACGGAGGTCAACCGATTCTACCGAAGGTATGCTCGCCGTGTTGGCTTTGGGGTGTCTGTTAGGAGGTCCTCATTTTCACAAGAGGGCACCTGCTTATATCTGGAGCTCATGTGCTGCAAAGGAGGGCGGCCACGTTATGAGCCAAAGTTCAGGAAACGGGCCTCTTCAACCACTAACTGTCCAGCCAAGATCAGAGTAAAGCTATGGGGAGATAAATTGTTGCATGTAGAGTTGGCAATCCTTGATCATAATCATCCTGTTAGCCCAGCAATGGCAAGGTTTTTGAACTCCTATAAGCAGCTATCTGGCCCTGCAAAGAGGCGATTACGTATGGGTGGCCCTGGAGCTATGCCAGTGGAAGAACCAAGCAAGATGCCTGTTGATAAGTTGGGTGCACTTGAGGAGCTTTTGTTTGGAGAGAGCAAGCACCATAGTTTTGTTGAGAGGGGCCGCTTGAAGTTCCAACCTGGAGATTCAGAAGCCCTTCGGCTTTTCTTTACTCGTATGCAAGCCAAAAATGCAAACTTCTTTAATGTCGTTGACTTGGATGATGAAGGCTGTGTCAGAAATGTCTTCTGGGCAGATGCACGGTCAAGATCCATGTATGAGTTCTATAACGATGTTGTCACACTTGACACATCGTATGTGGTCGGTAAATATGATATGCCTCTTGCAACTTTTATTGGGGTGAATCATCATGGCCAATCTGTTTTATTGGGTTGTGGCCTGCTTTCAGATGAAACAGCAGAAACCTATTCATGGCTATTTAAGGCTTGGATAGCATGCATGTCTGGTAATCTTCCAAAGGCTATCATCACTGGCCACTGCAGGGGCATCCAGAGTGCGGTTGCTGAGGTTATTCCTGGAGTCCATCATAGAATATGCCTATTTCATATAATGAGGAAGGCGACAGAGCGATTAGGTGGTCTGTCGGAGTACGCAGCTATCAGCAAGGCTTTCCAAAAAGCTGTATATGATTCTTTAACCATAGATGAGTTTGAAGGAAATTGGAATGCTCTGATTACATACAATGGGCTTCAGGGTAATGACTGGCTAAGATCAATTTATGAGTGCCGATACTCATGGGTTCCTGTTTTTCTTAAAGATACATTTTGGGCAGGAATATTTGAAAACCAATTGAAGCACTTTCTTGGGAAGTATGAGATGGCCTTGCAAAGCAAATATGAAAAGGAGGCCCAAGCAGATTTTGAGACATTCCATAAGCAGTGCCCACCTGTGTCGAAATTCTATATGGAAGAGCAACTGTCCAAGGTATACACCCATAACATCTTCAAGAAATTCCAAGATGAAATTGAAGCAATAATGTACTGCCATGTATCTTTCATTAATGTTGATGGCCTCATATCCACATTCGATGTCAAGGAATGGATTTTCCTTGAAGATGGTAAAAGGACTATGAGCAAGATCTTTACAGTGACAAATAACACAGATAAAAATGATTTAACTTGTATCTGTGGAGGTTTCCAGTTTAATGGAATATTGTGTAGGCATAGTCTCTCAGTCCTCAAGTTTCAACAGGTTCGTGAAATTCCTCCACACTATGTTCTTGATAGGTGGAAAAAGGATTTCAGACAGTTGCATGTGATGGGGCGTCCTTCAAGTGATGTTGTTCCAAACAATCGTGTGGATCGATATGATTATTTGTCAATGAGATGTCTGCAGCTAGTTGATTCAGCAGTCCTATCAGATAAATATCGTCTTGCTTTGAGATTGGTGAGGGAGATGGAGAAGTTTATGTTAAACAGCAACACGCATGATGATACACAACCAAGGATCAAGTCTCGCATTCCTAAAGCAAATAAACCAAATACAGTGGTTGGTCAAAATCTGGTAAACGTTGGCACTTACAATGGAAATGATAGGCCCAAAGCAACAACAGAGGCTTCTTCATTAACACAGGGATTGGATGTCCAGAAGGGAGGAGCAGAAAAGGGCATAGTTCCTGCTGGTTACATTGGACTGCCAGCTAATGTTCAGCAATTCGTAGGCAGTCAAACAGCGATTCGCCCAAGCATTGTGTATATGGTTCCGAGTGGTGTTGACCCACAGGCATTTGGAAATGGTGTTCTGATGCCTGTTGTGTACCAGCAGATGTTCCAGGTACCCCAGCAGCCAAATGGAACCATGCCAGATACTTCAGCAAATGGAAAAAGGAAGCGGCCTCGTGCCCAGAAGCCAACAGAGGCATCTGAACAGTCAAATGGAACCCCGGCAACAGGACCCACATCTGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MMEAEEAFPPQRNPRRARRRDLNALDPSLEESDGEDIGVPEVGMVFNNHTEVNRFYRRYARRVGFGVSVRRSSFSQEGTCLYLELMCCKGGRPRYEPKFRKRASSTTNCPAKIRVKLWGDKLLHVELAILDHNHPVSPAMARFLNSYKQLSGPAKRRLRMGGPGAMPVEEPSKMPVDKLGALEELLFGESKHHSFVERGRLKFQPGDSEALRLFFTRMQAKNANFFNVVDLDDEGCVRNVFWADARSRSMYEFYNDVVTLDTSYVVGKYDMPLATFIGVNHHGQSVLLGCGLLSDETAETYSWLFKAWIACMSGNLPKAIITGHCRGIQSAVAEVIPGVHHRICLFHIMRKATERLGGLSEYAAISKAFQKAVYDSLTIDEFEGNWNALITYNGLQGNDWLRSIYECRYSWVPVFLKDTFWAGIFENQLKHFLGKYEMALQSKYEKEAQADFETFHKQCPPVSKFYMEEQLSKVYTHNIFKKFQDEIEAIMYCHVSFINVDGLISTFDVKEWIFLEDGKRTMSKIFTVTNNTDKNDLTCICGGFQFNGILCRHSLSVLKFQQVREIPPHYVLDRWKKDFRQLHVMGRPSSDVVPNNRVDRYDYLSMRCLQLVDSAVLSDKYRLALRLVREMEKFMLNSNTHDDTQPRIKSRIPKANKPNTVVGQNLVNVGTYNGNDRPKATTEASSLTQGLDVQKGGAEKGIVPAGYIGLPANVQQFVGSQTAIRPSIVYMVPSGVDPQAFGNGVLMPVVYQQMFQVPQQPNGTMPDTSANGKRKRPRAQKPTEASEQSNGTPATGPTSG</aaseq>

Gene Sequence

<dnaseqindica>1..75#852..2047#2101..2878#3007..3042#3145..3258#3477..3545#3630..3764#ATGATGGAGGCGGAGGAGGCGTTCCCTCCGCAGAGGAATCCCCGCCGCGCGCGGCGCCGCGACCTCAACGCACTGGTTTGATCCGATTGACCCCCTCAGTTTTTTTTTTAAAAAAAAATATTATTGTTGTTATATAACTCCCCATCGGTTTAGCGGCCCTGTGGCCCTGTCATTGTAGACGTTTGATGTATGCAGGGTTTGAGGTTTTACTGTGAAATTTGACTCTCGTTTCGAGGTTTTACCTGGAATGGATTGTCTCGATTTTATGGGGGGTTTAGGGTTCCTTACGTGAATGAATGGCTGTGTGTTTGCAGTGGTTCATGTTCTAGTAAGGAATTGTGATTTCGGGTTTATATATTTACAGCGGCAGGTTGTTTGTGAGTAAAGGACTCGAAGGTTAGGATTTTTTTGTAGTTCCAATTTGTTCGTATTTAGGCTTTACTGTTTTATATTGGTGAGTTGGAGTGACATTTTAGTTTCCTGAGGCAGTTTAGTTCAACCCATTATACTAGTTCATCCTCGATTGGTTTTGTGTGTTGCAACCTCTGACTATTAGGATTTAGTACTTAACATAGATGACTGCTCCAGCTCTTTTAATAGGCCAAACGAGGTATCATGCCGCGCCATCCTGATGATCCTAAATTTGCCAAACAAAGTATCATGCTGTGCCATCCTGATAATCCTAAATTTAGGACATTCTATATGTGCAAGTTCAACGAGTGGTGATTCCATTTCTATGTTGTAGAGAAGGTTGATTTTTTAGTTGTCATCAATTTGTATAAGCTGGAAGACACTTTAGGTTTTGAACATGTTGCATTTGCTATGTTCTGATGATTGAGGTATTGTTTCAGGATCCCAGTTTAGAAGAGTCTGATGGAGAGGATATTGGTGTTCCAGAAGTTGGCATGGTGTTTAATAACCACACGGAGGTCAACCGATTCTACCGAAGGTATGCTCGCCGTGTTGGCTTTGGGGTGTCTGTTAGGAGGTCCTCATTTTCACAAGAGGGCACCTGCTTATATCTGGAGCTCATGTGCTGCAAAGGAGGGCGGCCACGTTATGAGCCAAAGTTCAGGAAACGGGCCTCTTCAACCACTAACTGTCCAGCCAAGATCAGAGTAAAGCTATGGGGAGATAAATTGTTGCATGTAGAGTTGGCAATCCTTGATCATAATCATCCTGTTAGCCCAGCAATGGCAAGGTTTTTGAACTCCTATAAGCAGCTATCTGGCCCTGCAAAGAGGCGATTACGTATGGGTGGCCCTGGAGCTATGCCAGTGGAAGAACCAAGCAAGATGCCTGTTGATAAGTTGGGTGCACTTGAGGAGCTTTTGTTTGGAGAGAGCAAGCACCATAGTTTTGTTGAGAGGGGCCGCTTGAAGTTCCAACCTGGAGATTCAGAAGCCCTTCGGCTTTTCTTTACTCGTATGCAAGCCAAAAATGCAAACTTCTTTAATGTCGTTGACTTGGATGATGAAGGCTGTGTCAGAAATGTCTTCTGGGCAGATGCACGGTCAAGATCCATGTATGAGTTCTATAACGATGTTGTCACACTTGACACATCGTATGTGGTCGGTAAATATGATATGCCTCTTGCAACTTTTATTGGGGTGAATCATCATGGCCAATCTGTTTTATTGGGTTGTGGCCTGCTTTCAGATGAAACAGCAGAAACCTATTCATGGCTATTTAAGGCTTGGATAGCATGCATGTCTGGTAATCTTCCAAAGGCTATCATCACTGGCCACTGCAGGGGCATCCAGAGTGCGGTTGCTGAGGTTATTCCTGGAGTCCATCATAGAATATGCCTATTTCATATAATGAGGAAGGCGACAGAGCGATTAGGTGGTCTGTCGGAGTACGCAGCTATCAGCAAGGCTTTCCAAAAAGCTGTATATGATTCTTTAACCATAGATGAGTTTGAAGGAAATTGGAATGCTCTGATTACATACAATGGGCTTCAGGGTAATGACTGGCTAAGATCAATTTATGAGTGCCGATACTCATGGGTTCCTGTTTTTCTTAAAGATACATTTTGGGCAGGAATGTCTGCTACACAAAGAAATGAAAATATCATTCCTTTCTTTGATGGATATGTAGATTTGAAAACCAATTGAAGCACTTTCTTGGGAAGTATGAGATGGCCTTGCAAAGCAAATATGAAAAGGAGGCCCAAGCAGATTTTGAGACATTCCATAAGCAGTGCCCACCTGTGTCGAAATTCTATATGGAAGAGCAACTGTCCAAGGTATACACCCATAACATCTTCAAGAAATTCCAAGATGAAATTGAAGCAATAATGTACTGCCATGTATCTTTCATTAATGTTGATGGCCTCATATCCACATTCGATGTCAAGGAATGGATTTTCCTTGAAGATGGTAAAAGGACTATGAGCAAGATCTTTACAGTGACAAATAACACAGATAAAAATGATTTAACTTGTATCTGTGGAGGTTTCCAGTTTAATGGAATATTGTGTAGGCATAGTCTCTCAGTCCTCAAGTTTCAACAGGTTCGTGAAATTCCTCCACACTATGTTCTTGATAGGTGGAAAAAGGATTTCAGACAGTTGCATGTGATGGGGCGTCCTTCAAGTGATGTTGTTCCAAACAATCGTGTGGATCGATATGATTATTTGTCAATGAGATGTCTGCAGCTAGTTGATTCAGCAGTCCTATCAGATAAATATCGTCTTGCTTTGAGATTGGTGAGGGAGATGGAGAAGTTTATGTTAAACAGCAACACGCATGATGATACACAACCAAGGATCAAGTCTCGCATTCCTAAAGCAAATAAACCAAATACAGTGGTTGGTCAAAATCTGGTAAACGTTGGCACTTACAATGGAAATGATAGGCCCAAAGCAACAACAGAGGTATCTGTTCAACCTGTAGTTAACATTGTAAAGATGCCTATTATGTTGGAAGCATTATGGTAAATAACTATGAGAATAATCATCTTAACCCACTGCCTATCTGATTGATCTTATTTTGCAAGATGCAGGCTTCTTCATTAACACAGGGATTGGATGTCCAGAAGGTACTACATTTAGCTATGGCATGAGTAAATTTTGGTGCATTATCCTCTTATAGGTGACATTTGTTAATAAGGATATTGATTTCTATTTTTTTTTAACTATAGGGAGGAGCAGAAAAGGGCATAGTTCCTGCTGGTTACATTGGACTGCCAGCTAATGTTCAGCAATTCGTAGGCAGTCAAACAGCGATTCGCCCAAGCATTGTGTATATGGTTCCGGTATGTCAAAGTTACAAATAACTATATTTGCTCAACTGTGCCTTGATAGTATCTACAGCACCAGAGGACCAAATTCTAGGATATTTGGTTGCTTTTCTTGCACAAACATATGTGGATTCATACAACTCATCTTTATTTGTTAATGCATAAGCCCCAAGTACTCATCATTTTTCAGGATATGTGCTGTGAAATTGATTCTTTCTTATTTAATTTTTCAGAGTGGTGTTGACCCACAGGCATTTGGAAATGGTGTTCTGATGCCTGTTGTGTACCAGCAGATGTTCCAGGTTTGTATATTTTTGTGTTAGGACTTGAGAAGTTAATCCGTTCGTCTTGTAGGATGATTTCACGTTTATCGCTGGTATATCTAGGTACCCCAGCAGCCAAATGGAACCATGCCAGATACTTCAGCAAATGGAAAAAGGAAGCGGCCTCGTGCCCAGAAGCCAACAGAGGCATCTGAACAGTCAAATGGAACCCCGGCAACAGGACCCACATCTGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008595