BGIOSGA008596

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Revision as of 03:17, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008596| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008596, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008596

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008596, complete gene.

LocusTag

OSJNBA0030C08.36

Ensembl Transcript ID

BGIOSGA008596-TA

Ensembl Protein ID

BGIOSGA008596-PA

Length

5485

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25586029..25591513

Sequence Coding Region

25586029..25586196,25586839..25586922,25587038..25587106,25587186..25587269,25587355..25587513
,25588136..25588222,25588384..25588467,25588583..25588651,25588731..25588814
,25588900..25589058,25589681..25589767,25590089..25590193,25590270..25590392
,25590471..25590623,25590939..25591004,25591430..25591513

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25586029..25591513 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25586029..25591513 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATAAACCGGATCGCCGGGGTGTTCGCCAGGAGAGGGTACAACATCGAGTCGCTCGCCGTGGGGCTCAACAAGGACAAGGCCATGTTCACCATTGTCGTCTCCGGCACGGACAGGGTGCTCAACCAAGTCATCGAGCAGCTCAACAAGCTTGTCAACGTCTTGAATGTGGAAGATCTATCTAAGGAGCCACAGGTTGAAAGAGAGCTGATGCTTATAAAAATTAATGTTGAACCAGATCAGCGTCCTGAGGTCATGGTTTTAGTTGATATTTTCCGAGCGAAAGTTGTTGATATTTCGGAGAACACCCTTACCATCGAGGTAACTGGAGATCCTGGCAAAATTGTTGCTGTGCAAAGGAACCTCAGCAAATTTGGGATAAAAGAAATTTGTAGAACGGGAAAAATTGCTTTGAGACGTGAAAAAATTGGAGCAACTGCCCGCTTCTGGGGATTTTCTGCTGCTTCTTACCCAGATCTCATAGAGGCATTGCCCAAAAATTCTCTTCTTACTTCTGTAAATAAGACAGTCAATGGAAGTTTTGATCAACCATCCAATGCTGGGGGCGATGTCTATCCTGTGGAACCTTATGAGGGTTCATCCATGAACCAAGTACTTGATGCTCACTGGGGCGTCCTTGATGATGAAGATGTGGAAGATCTATCTAAGGAGCCACAGGTTGAAAGAGAGCTGATGCTTATAAAAATTAATGTTGAACCAGATCAGCGTCCTGAGGTCATGGTTTTAGTTGATATTTTCCGAGCGAAAGTTGTTGATATTTCGGAGAACACCCTTACCATCGAGGTAACTGGAGATCCTGGCAAAATTGTTGCTGTGCAAAGGAACCTCAGCAAATTTGGGATAAAAGAAATTTGTAGAACGGGAAAAATTGCTTTGAGACGTGAAAAAATTGGAGCAACTGCCCGCTTCTGGGGATTTTCTGCTGCTTCTTACCCAGATCTCATAGAGGCATTGCCCAAAAATTCTCTTCTTACTTCTGTAAATAAGACAGTCAATGGAAGTTTTGATCAACCATCCAATGCTGGGGGCGATGTCTATCCTGTGGAACCTTATGAGGGTTCATCCATGAACCAAGTACTTGATGCTCACTGGGGCGTCCTTGATGATGAAGATTCAAGTGGACTTCGATCACATACTCTATCCATCCTTGTCAATGATTGCCCTGGTGTTCTCAACATTGTTACAGGGGTCTTTGCTCGCAGAGGCTACAATATACAGAGTCTTGCTGTAGGCCCAGCTGAAAAGTCAGGCCTTTCGCGTATTACAACAGTTGCTCCTGGAACAGATGAATCCATTGAGAAGTTAGTTCAGCAGCTTTACAAACTTGTTGATGTGCATGAGGTTCAAGATATAACTCACTTGCCTTTTGCTGAAAGAGAACTTATGCTTATCAAGGTTTCTGTGAACACTGCTGCTCGGCGAGACATACTAGATATTGCTGAAATCTTCCGGGCAAAATCTGTTGATGTTTCTGATCACACTGTTACGTTACAGCTTACTGGGGATCTCGACAAGATGGTTGCATTACAAAGGCTGTTGGAGCCTTATGGCATCTGTGAGGTCGCCAGAACAGGGCGAGTGGCGCTGGTCCGCGAATCCGGTGTCGATTCCAAGTACCTTCGTGGTTACTCCTTTTCGTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MINRIAGVFARRGYNIESLAVGLNKDKAMFTIVVSGTDRVLNQVIEQLNKLVNVLNVEDLSKEPQVERELMLIKINVEPDQRPEVMVLVDIFRAKVVDISENTLTIEVTGDPGKIVAVQRNLSKFGIKEICRTGKIALRREKIGATARFWGFSAASYPDLIEALPKNSLLTSVNKTVNGSFDQPSNAGGDVYPVEPYEGSSMNQVLDAHWGVLDDEDVEDLSKEPQVERELMLIKINVEPDQRPEVMVLVDIFRAKVVDISENTLTIEVTGDPGKIVAVQRNLSKFGIKEICRTGKIALRREKIGATARFWGFSAASYPDLIEALPKNSLLTSVNKTVNGSFDQPSNAGGDVYPVEPYEGSSMNQVLDAHWGVLDDEDSSGLRSHTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGPAEKSGLSRITTVAPGTDESIEKLVQQLYKLVDVHEVQDITHLPFAERELMLIKVSVNTAARRDILDIAEIFRAKSVDVSDHTVTLQLTGDLDKMVALQRLLEPYGICEVARTGRVALVRESGVDSKYLRGYSFSL</aaseq>

Gene Sequence

<dnaseqindica>1..168#811..894#1010..1078#1158..1241#1327..1485#2108..2194#2356..2439#2555..2623#2703..2786#2872..3030#3653..3739#4061..4165#4242..4364#4443..4595#4911..4976#5402..5485#ATGATAAACCGGATCGCCGGGGTGTTCGCCAGGAGAGGGTACAACATCGAGTCGCTCGCCGTGGGGCTCAACAAGGACAAGGCCATGTTCACCATTGTCGTCTCCGGCACGGACAGGGTGCTCAACCAAGTCATCGAGCAGCTCAACAAGCTTGTCAACGTCTTGAATGTGAGCCCCCTTGCTCCAAAATTTGTTGGGGTCATGTGAATTTGATGCTTAAACCAATTTAGTTTGCCATTTATAGATCTGATAAGCTTCCAGCCCTCAGTAAGATTCTTTGACAGCGATTGGTGTCAGCAGAGTGAAGATACCAATGTTGAATATTGTTCTATAAAGAGCGGAATTTCTACAGTATCAACTCTGTTTATATTTTATAACGTGCCTTGCTCTTGAGCATCTTTTGTAGCTAGAAATACCAAGGGCAGAAACCTTTTATCCTAATCTGGTCAAAACATTAGCCCTCTTTATTGAAAATCTTCTAAGAGTAAGAATAAATAACTCTTTTCCGTGAGTATCTCGCTAACTATATTGAATGTCAAACTTGCATTTTATCACGTACAGACATATTCTGGTCAATGTGACCTTGTTTAAAATAGTTGCATTGCATTTCAATTATTGAAAATGTTCATTGCTTTCCCTTATCTATCATATAGTCTCTCTCTCCCGTGTTCACACGAAACATCGCACTAACCATTCCTCACCTATGTACAAGGTAGTTAAGTCTGGAACGCTGGATAGCATGGTCATTTTAACCTCTCTTTCTCTTGATTTTATACTCTCCTTAATTCTTGTGCCGGCTAAAAATTGCAGGTGGAAGATCTATCTAAGGAGCCACAGGTTGAAAGAGAGCTGATGCTTATAAAAATTAATGTTGAACCAGATCAGCGTCCTGAGGTAACATGTGCTGTTGACTTGCTATTTGCATAGTGTAAAAACTTTGTGTAGTGAATTAAGCAACAGGCATGTTGGAACTCACTCGTACTGCACAAAATCTTGTTATGATTGTCAGGTCATGGTTTTAGTTGATATTTTCCGAGCGAAAGTTGTTGATATTTCGGAGAACACCCTTACCATCGAGGTAAAGACTCCTGATTCCAACAGGTTTACATACATATGATTGTAGGAATTCCTTTGATGTGTATTTGATCAAGTTGTAGGTAACTGGAGATCCTGGCAAAATTGTTGCTGTGCAAAGGAACCTCAGCAAATTTGGGATAAAAGAAATTTGTAGAACGGGAAAAGTATTTTCTTGACCATTTTCTATTTGCATTTATCATGCATGCATACATGTGTTATTCACAGTGCTGACTCTTTTTTCCCCCTCAGATTGCTTTGAGACGTGAAAAAATTGGAGCAACTGCCCGCTTCTGGGGATTTTCTGCTGCTTCTTACCCAGATCTCATAGAGGCATTGCCCAAAAATTCTCTTCTTACTTCTGTAAATAAGACAGTCAATGGAAGTTTTGATCAACCATCCAATGCTGGGGTATGTTTCTTGTACTTTAAATAGAAAAAAAATCTCATGAGTCCTTCATCTAGTTCTATTTTATTTTTACATAATTTGAATAATTAGCTGGTTATGTTGAGAGTGCATTTTACTCGGTACGAAAACAAATGCAGTTGAACCTAGATGTTAGCCAGTATTGGTTCCAGAACAATGTAATGCTATAAGCGATAATAACTTAGTGCATAAACACAATTAGTATGCTATAAAGGTGCCATATCTCTGAACTTATTCCATATTTCTATTTAAATATTTACCTTCAGTCCTGTGAGGTGAGTTCACTGAAGACAACATATTCTTTGGTGGTGAAAAGCACACTGTGGAGTAGAATTACAGGTGGCGTTCATGTTGGGGTTACTGAAATGCATATTCACTAGTACCTTATGTCATTGGATGAGACCTGATGATACATAAGCAGGCACCCCCACACTAACGTTGTTCAACTTTTGGTATAGCATCTGTGCATTAGTCATAGCATAAGTTATATGCTAATATATTTGATGGCCAGAAATGAGTAACATAACAAAAGTCGTATATGCCTGTCTATTGCAATATGTTACCGATTCCTGTAACATTTAGTCACTTTTACTATTTAATTGTTCAGGGCGATGTCTATCCTGTGGAACCTTATGAGGGTTCATCCATGAACCAAGTACTTGATGCTCACTGGGGCGTCCTTGATGATGAAGATGTAAGTTTCAATATTATCAGTTTAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGCTGGATAGCATGGTCATTTTAACCTCTCTTTCTCTTGATTTTATACTCTCCTTAATTCTTGTGCCGGCTAAAAATTGCAGGTGGAAGATCTATCTAAGGAGCCACAGGTTGAAAGAGAGCTGATGCTTATAAAAATTAATGTTGAACCAGATCAGCGTCCTGAGGTAACATGTGCTGTTGACTTGCTATTTGCATAGTGTAAAAACTTTGTGTAGTGAATTAAGCAACAGGCATGTTGGAACTCACTCGTACTGCACAAAATCTTGTTATGATTGTCAGGTCATGGTTTTAGTTGATATTTTCCGAGCGAAAGTTGTTGATATTTCGGAGAACACCCTTACCATCGAGGTAAAGACTCCTGATTCCAACAGGTTTACATACATATGATTGTAGGAATTCCTTTGATGTGTATTTGATCAAGTTGTAGGTAACTGGAGATCCTGGCAAAATTGTTGCTGTGCAAAGGAACCTCAGCAAATTTGGGATAAAAGAAATTTGTAGAACGGGAAAAGTATTTTCTTGACCATTTTCTATTTGCATTTATCATGCATGCATACATGTGTTATTCACAGTGCTGACTCTTTTTTCCCCCTCAGATTGCTTTGAGACGTGAAAAAATTGGAGCAACTGCCCGCTTCTGGGGATTTTCTGCTGCTTCTTACCCAGATCTCATAGAGGCATTGCCCAAAAATTCTCTTCTTACTTCTGTAAATAAGACAGTCAATGGAAGTTTTGATCAACCATCCAATGCTGGGGTATGTTTCTTGTACTTTAAATAGAAAAAAAATCTCATGAGTCCTTCATCTAGTTCTATTTTATTTTTACATAATTTGAATAATTAGCTGGTTATGTTGAGAGTGCATTTTACTCGGTACGAAAACAAATGCAGTTGAACCTAGATGTTAGCCAGTATTGGTTCCAGAACAATGTAATGCTATAAGCGATAATAACTTAGTGCATAAACACAATTAGTATGCTATAAAGGTGCCATATCTCTGAACTTATTCCATATTTCTATTTAAATATTTACCTTCAGTCCTGTGAGGTGAGTTCACTGAAGACAACATATTCTTTGGTGGTGAAAAGCACACTGTGGAGTAGAATTACAGGTGGCGTTCATGTTGGGGTTACTGAAATGCATATTCACTAGTACCTTATGTCATTGGATGAGACCTGATGATACATAAGCAGGCACCCCCACACTAACGTTGTTCAACTTTTGGTATAGCATCTGTGCATTAGTCATAGCATAAGTTATATGCTAATATATTTGATGGCCAGAAATGAGTAACATAACAAAAGTCGTATATGCCTGTCTATTGCAATATGTTACCGATTCCTGTAACATTTAGTCACTTTTACTATTTAATTGTTCAGGGCGATGTCTATCCTGTGGAACCTTATGAGGGTTCATCCATGAACCAAGTACTTGATGCTCACTGGGGCGTCCTTGATGATGAAGATGTAAGTTTCAATATTATCAGTTTAGATAAAAGCATTATTCAGTCAGTGTTAAGTTCCATATGAACCTTGGCAACTATATCCAAACTTTATTTGAGACAAAAAAAACTATGTCTAACTTATGTTGTATGTATTCAAAACCGAATCTAGTTCCAATGTGACTACACTGAGTTCACATTTTCCATCTTCACAATCAGCAACCAGTCATATATATATATATATATATATCTGTAGCTCTAAGCTGCTCAGTGTTAAATATACATGTTAATATATACAAAATTAAGGATGCAGGTCCTAAGCTAAATATGATTTTATTTGGTGCAGTCAAGTGGACTTCGATCACATACTCTATCCATCCTTGTCAATGATTGCCCTGGTGTTCTCAACATTGTTACAGGGGTCTTTGCTCGCAGAGGCTACAATATACAGGTTTTCTTTTTTTCGAATAGTTATTATCTCGCCGTCATGCCTGATTAGTTGTTAACAAGACCATACTACTGGTCAGAGTCTTGCTGTAGGCCCAGCTGAAAAGTCAGGCCTTTCGCGTATTACAACAGTTGCTCCTGGAACAGATGAATCCATTGAGAAGTTAGTTCAGCAGCTTTACAAACTTGTTGATGTGCATGAGGTAAATCATATGCAGTTTTCAAGAGCAGTCAATTGTGGTAGTAAAGTCGCATTAATTCAAAAAATATGATTTGTGCAGGTTCAAGATATAACTCACTTGCCTTTTGCTGAAAGAGAACTTATGCTTATCAAGGTTTCTGTGAACACTGCTGCTCGGCGAGACATACTAGATATTGCTGAAATCTTCCGGGCAAAATCTGTTGATGTTTCTGATCACACTGTTACGTTACAGGTAATTTTAATTTTATGGCTAATGTTGCTTGTTATTGTTAAACTTTTCTTTATTAGCTTAATCAGCTTCATTTACGAAGAACACCGATCTATGTACAAATAACAAAGTGCCAGCATATAATTTTACCCGCAGCATTGTTATAGGAATTCTAGTGTTTTGTCCTAATAAGTTGTGTTGTGCTTTACTGTTTAGCAGCACAGAGCCTGCAGAAACACTGAATGTTTAGCTGAACCACAACTGTCATTTACTCATTTAATGCCCATTCAAATTATTGTGGGACTTCTGCATACTTGATAACTTGCCGCGATTGTGCAGCTTACTGGGGATCTCGACAAGATGGTTGCATTACAAAGGCTGTTGGAGCCTTATGGCATCTGTGAGGTATATTGAATTCTTTTTGTACTTTTCTTTCACCTCATCCGTTTGTTGCTCATGTGGTTATGTGATGTGAAATGATGTCAACAGATTATCTGCGCAAATACTGTTACCGTATTAACACACATTGTCTCAAAAACTCATTCTCCACACGTAATGGATACTTTTGCCGAAGTGAACACATGCTTTTGACTACCAAAATAATTTTAAATCATTTGCCAACATCTGCTTTATGTCTTTAAATATGATATGCTAGGTTGCTAGCCGTCTCCTTTCTATCTGGGACAATGGATCCGTATGCTTTCGCACCCATGCTCGCGGCGTTTACTTTCCTCACTATTTTTTAGATAATGGATAGAAATCCGATCTCTATATCCACATGTAATATACCCAGCTTTCCTCGCTAATGCATATTCCGTCCATAACCACAGGTCGCCAGAACAGGGCGAGTGGCGCTGGTCCGCGAATCCGGTGTCGATTCCAAGTACCTTCGTGGTTACTCCTTTTCGTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008596

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008596&oldid=62148"