Os12g0590900

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0590900| Description = Conserved hypothetical protein| Version = NM_001073700.2 GI:297613449 GeneID:4352675| Length = 3781 bp| Definition ...")
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Gene Name

Os12g0590900

Description

Conserved hypothetical protein

Version

NM_001073700.2 GI:297613449 GeneID:4352675

Length

3781 bp

Definition

Oryza sativa Japonica Group Os12g0590900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:24945712..24949492

Sequence Coding Region

24946442..24949168

Expression

GEO Profiles:Os12g0590900

Genome Context

<gbrowseImage1> name=NC_008405:24945712..24949492 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:24945712..24949492 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatctctccctatggaagcccctctcccactgcgccgccgtcctcctcgccaagaaccaccgccgccgcggcggcggcggcggaagcaatggccaccgcggtgacgacccggcgtcgttcctccgccagctgcgcgacgcgctcgacgccgcgtcggaggacggctcgctgtgcccgcccccggacgccgcgggcgcgggcgcggacgccgacgcggacgccgccgtgtcgcgctcccgctcgctcgcgcggctccgggcgcagcgcgacttcctccgcgccaccgcgctcgccgcggcgggcggcccgttccgctcgccctccgacatcccgctcctccccgccgccatcgccgggttcctcgccatgtacccggactacgccaccacgtccgacgtcgaccgcctccgcgtcgagcactactcccacctcgacgccgccgcccccggcggcggcgcgggcggcagggtctgcctcgactactgtggtttcggcctcttcgactccggctgggactcctcctcctcgtccttcacattgtccgagctcaatgccaacctcagcaaccacgcgctctacggcggcgccgaggccggcacggtggagaacgacatcaaggagaggatcctcgagtacctgaacgtgccggcgagcgagtacgcgctggtgttcaccgtgagccggggctcggcgttccggctcctcgccgagtgctacccgttcgagaccaaccggaggctgctcaccatgttcgaccacgagagccagtccgtgagctggatggcgcagagcgcgcgggcgaagggtgccaagacgcgcaccgcgtggttccggtggccgacattgaagctctgctcgacggagctgaggaaggagatcgtcggtaagaggagagggcggcgacgggattctgcggttggtttgtttgtgttccctgcacaatctcgggtgaccggcgccaagtactcctaccagtggatggcgctggcgcagcagaatggctggcatgtgatgcttgatgcaggcgcactgggccccaaggacatggattctctggggctctcgctgttcaggccggatttcatcataacctcgttctaccgggttttcggtgcagacccaactgggtttggttgccttctgattaagaaatcagttattgggagcttgcaggggaggaatgggtgtaatgcttctgggatggtgaggattgttccagtgtttccgcaatatctaagtgattctgttgatggatttgatgcaatggatggtctcgaagatgattctggtgtccacaaagatgagaagccagcgtctgatgcccgtaatggttcgcagctgccagcattttcaggtgtgtacacatctgctcaggtcagagaggcatttgagagtgatcctggccgtgacagcagctcggacagggatggggcgagcaccatttttgaagaaactgagagcatctcagttggtgaggtcatgaggagcccggctttcagcgaagattgctcttcagagaattctttctgggttgatgttggccaaagcccattggggtcggagaagggtggtcatttcaagaaagggaaacttggatccccattaccatcttcttggttcgctggcagaaagagtaacaagaggatgtcaccgaacctaacatccaggatatcaagaagccctctttatgatggtcaggtgatatcttttgatgcagctgtattatcagtttcacatgacgcggactgcctcaaggaagaccctgaagaagaaatctatgagaatggtcggcggaatcacttcaggcaagttagtgaaattcaagaggagccagaggttgaagaagttgtatgtcaacatgctatgaatggcggtggggatcacaaagaaagtgcgataagaagggagactgaaggggaatttcggcttttgggagggagggatggaaacagcagatttgctgggggtcggctcttcggtgttgaagagattgatgcaggtttaagcatgggccgtagggtttcattcagcactgaagcaaatattattgcggatagactacaccgggcctcagatgctgctgaagcttctggatatgcattccgtgatgatgatggttgtgtaagtgatgggtatgataatgctcaggactggggcaggagagagccggagataatatgcaggcacattgatcatgttgatatgatggggcttaacagaactactcttagattaagatacctgatcaattggctagtaacttcactgttgcagctgaggttaccaggctcaaaaggtggtgatggagacccccttgtccacatttatggcccaaagattaagtacgaaaggggagctgctgttgctttcaatgtgaagcaaagtgatggcacttttgttaatgctgaagttgtccagaagattgcggagaagaatggcatatctcttggcattggttttctcagtcatataaaggtggacctgaaccacaaacagttaaatggagcattcgatatacctgaggcttccttctataagaacggccgcaaagacagtaaaaaggtgaccataagagttgaagttgtgactgcttcccttggcttccttactaattttgaagacgtgtacaatatgtgggcatttgtcgccaagtttctggatccttcatttctagaaagtgagcgcctcaccattgctgctgaccactcagagggacaaacttga</cdnaseq>

Protein Sequence

<aaseq>MHLSLWKPLSHCAAVLLAKNHRRRGGGGGSNGHRGDDPASFLRQ LRDALDAASEDGSLCPPPDAAGAGADADADAAVSRSRSLARLRAQRDFLRATALAAAG GPFRSPSDIPLLPAAIAGFLAMYPDYATTSDVDRLRVEHYSHLDAAAPGGGAGGRVCL DYCGFGLFDSGWDSSSSSFTLSELNANLSNHALYGGAEAGTVENDIKERILEYLNVPA SEYALVFTVSRGSAFRLLAECYPFETNRRLLTMFDHESQSVSWMAQSARAKGAKTRTA WFRWPTLKLCSTELRKEIVGKRRGRRRDSAVGLFVFPAQSRVTGAKYSYQWMALAQQN GWHVMLDAGALGPKDMDSLGLSLFRPDFIITSFYRVFGADPTGFGCLLIKKSVIGSLQ GRNGCNASGMVRIVPVFPQYLSDSVDGFDAMDGLEDDSGVHKDEKPASDARNGSQLPA FSGVYTSAQVREAFESDPGRDSSSDRDGASTIFEETESISVGEVMRSPAFSEDCSSEN SFWVDVGQSPLGSEKGGHFKKGKLGSPLPSSWFAGRKSNKRMSPNLTSRISRSPLYDG QVISFDAAVLSVSHDADCLKEDPEEEIYENGRRNHFRQVSEIQEEPEVEEVVCQHAMN GGGDHKESAIRRETEGEFRLLGGRDGNSRFAGGRLFGVEEIDAGLSMGRRVSFSTEAN IIADRLHRASDAAEASGYAFRDDDGCVSDGYDNAQDWGRREPEIICRHIDHVDMMGLN RTTLRLRYLINWLVTSLLQLRLPGSKGGDGDPLVHIYGPKIKYERGAAVAFNVKQSDG TFVNAEVVQKIAEKNGISLGIGFLSHIKVDLNHKQLNGAFDIPEASFYKNGRKDSKKV TIRVEVVTASLGFLTNFEDVYNMWAFVAKFLDPSFLESERLTIAADHSEGQT</aaseq>

Gene Sequence

<dnaseqindica>731..3457#agagccctccctcatgatgcaaatgcatttagtgagggcattcaaaacacttgcaagagtttggtgagaggagggaggctctgtgtgagatttgttctgcatctgaccttaagcttcttcttcttcttcttccctagatttggagagactagagccaggccagttcatcactggtttgttggggagcattgtttcttgcttgctgcaaagcagaaaagacagagtcaaatctttagtttttatttacatatttctttcttttttgcttcctcctctttgatgctcttttctttaatttgagttcttgatcctgccaaaagcaaaagcccctcacttttagctgaggagagaagtccaaaaggaaaaggtgaaggcttgtcctccttgcatctcaactcaaaccctccatccccctccaaactccttcaaaccaaaaatctccaatttttaccacaaaaatccccatcttttcctccaaatccatttgatttcacccccaccaccaaacaaaccctctcagatttcttctccccacttctccattgccattctgccagtgttcttgattcaagaaatgctcattttctgatccatagttctccaaagatccaattttctgaaatctctccacgaaaatctctcattttttctcctcctcgatgcctcgttgatccaaaatcgccacgaagaagaaggagaagctgcgatttctcaggtcgctcgattccctatgcatctctccctatggaagcccctctcccactgcgccgccgtcctcctcgccaagaaccaccgccgccgcggcggcggcggcggaagcaatggccaccgcggtgacgacccggcgtcgttcctccgccagctgcgcgacgcgctcgacgccgcgtcggaggacggctcgctgtgcccgcccccggacgccgcgggcgcgggcgcggacgccgacgcggacgccgccgtgtcgcgctcccgctcgctcgcgcggctccgggcgcagcgcgacttcctccgcgccaccgcgctcgccgcggcgggcggcccgttccgctcgccctccgacatcccgctcctccccgccgccatcgccgggttcctcgccatgtacccggactacgccaccacgtccgacgtcgaccgcctccgcgtcgagcactactcccacctcgacgccgccgcccccggcggcggcgcgggcggcagggtctgcctcgactactgtggtttcggcctcttcgactccggctgggactcctcctcctcgtccttcacattgtccgagctcaatgccaacctcagcaaccacgcgctctacggcggcgccgaggccggcacggtggagaacgacatcaaggagaggatcctcgagtacctgaacgtgccggcgagcgagtacgcgctggtgttcaccgtgagccggggctcggcgttccggctcctcgccgagtgctacccgttcgagaccaaccggaggctgctcaccatgttcgaccacgagagccagtccgtgagctggatggcgcagagcgcgcgggcgaagggtgccaagacgcgcaccgcgtggttccggtggccgacattgaagctctgctcgacggagctgaggaaggagatcgtcggtaagaggagagggcggcgacgggattctgcggttggtttgtttgtgttccctgcacaatctcgggtgaccggcgccaagtactcctaccagtggatggcgctggcgcagcagaatggctggcatgtgatgcttgatgcaggcgcactgggccccaaggacatggattctctggggctctcgctgttcaggccggatttcatcataacctcgttctaccgggttttcggtgcagacccaactgggtttggttgccttctgattaagaaatcagttattgggagcttgcaggggaggaatgggtgtaatgcttctgggatggtgaggattgttccagtgtttccgcaatatctaagtgattctgttgatggatttgatgcaatggatggtctcgaagatgattctggtgtccacaaagatgagaagccagcgtctgatgcccgtaatggttcgcagctgccagcattttcaggtgtgtacacatctgctcaggtcagagaggcatttgagagtgatcctggccgtgacagcagctcggacagggatggggcgagcaccatttttgaagaaactgagagcatctcagttggtgaggtcatgaggagcccggctttcagcgaagattgctcttcagagaattctttctgggttgatgttggccaaagcccattggggtcggagaagggtggtcatttcaagaaagggaaacttggatccccattaccatcttcttggttcgctggcagaaagagtaacaagaggatgtcaccgaacctaacatccaggatatcaagaagccctctttatgatggtcaggtgatatcttttgatgcagctgtattatcagtttcacatgacgcggactgcctcaaggaagaccctgaagaagaaatctatgagaatggtcggcggaatcacttcaggcaagttagtgaaattcaagaggagccagaggttgaagaagttgtatgtcaacatgctatgaatggcggtggggatcacaaagaaagtgcgataagaagggagactgaaggggaatttcggcttttgggagggagggatggaaacagcagatttgctgggggtcggctcttcggtgttgaagagattgatgcaggtttaagcatgggccgtagggtttcattcagcactgaagcaaatattattgcggatagactacaccgggcctcagatgctgctgaagcttctggatatgcattccgtgatgatgatggttgtgtaagtgatgggtatgataatgctcaggactggggcaggagagagccggagataatatgcaggcacattgatcatgttgatatgatggggcttaacagaactactcttagattaagatacctgatcaattggctagtaacttcactgttgcagctgaggttaccaggctcaaaaggtggtgatggagacccccttgtccacatttatggcccaaagattaagtacgaaaggggagctgctgttgctttcaatgtgaagcaaagtgatggcacttttgttaatgctgaagttgtccagaagattgcggagaagaatggcatatctcttggcattggttttctcagtcatataaaggtggacctgaaccacaaacagttaaatggagcattcgatatacctgaggcttccttctataagaacggccgcaaagacagtaaaaaggtgaccataagagttgaagttgtgactgcttcccttggcttccttactaattttgaagacgtgtacaatatgtgggcatttgtcgccaagtttctggatccttcatttctagaaagtgagcgcctcaccattgctgctgaccactcagagggacaaacttgagctttatctgtaatttgcattcagcaaaggagaggaaggtgatttttctcctttatgccttcgaggagtatttggtagtggatttagcagatttgtttattctttgcttagttcctcgacatgtgaccttttttgtttcatgtagagtttgctcaaatatgtaccagcagctcaccagtagagcttctttccactgaacaatgtttgtaaagcagctcactgcctcactcgaaatgaaatagtttgagtgctttgtaatacacttggttaggcatgtgttcatcatgcagtttttatatcatcacttaacactgtcgcatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0590900, RefSeq:Os12g0590900