BGIOSGA008609

From RiceWiki
Revision as of 03:18, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008609| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008609, complete gene.| tag = OJ1004_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008609

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008609, complete gene.

LocusTag

OJ1004_A05.15

Ensembl Transcript ID

BGIOSGA008609-TA

Ensembl Protein ID

BGIOSGA008609-PA

Length

3397

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25777865..25781261

Sequence Coding Region

25777865..25778290,25780359..25781261

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25777865..25781261 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25777865..25781261 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATCAACGTGCGGGGGTCGACGATGGTGCGGCCGGCGGAGGAGACGCCGCGGGTGAGGCTGTGGAACTCTAGCCTGGACCTGGTGGTGCCGCGGTTCCACACGCCGAGCGTCTACTTCTTCCGGCGCGGCGAGGCGGCGGCGGCGGAGGGCGGGAGCTACTTCGACGGGGAGAGGATGCGGCGGGCGCTGGCGGAGGCGCTGGTTCCGTTCTACCCGATGGCGGGGCGGCTGGCGCACGACGAGGACGGCCGCGTGGAGATCGACTGCAACGGGGAAGGCGTGCTGTTCGTCGAGGCCGACGCGCCGGGCGCCACCGTCGACGACTTCGGCGACTTCGCGCCCACCATGGACCTCAAGCGCCTCATCCCCACCGTCGACTACACCGACGGCATCTCCTCCTTCCCCATCCTCGTGCTCCAGGTGACCCACTTCAAGTGCGGAGGCGTCGCCCTCGGCGTGGGCATGCAGCACCACGTCGCCGACGGCTTCTCCGGCCTGCACTTCATCAACTCGTGGGCGGACCTCTGCCGCGGCGTCCCGATCGCCGTCATGCCGTTCATCGACCGCACCCTCGTCCGCGCCCGCGACCCGCCGGCGCCGTCGCACCCGCACGTCGAGTACCAGCCGGCGCCCGCCATGCTGGCCCCCGAGCCGCCGCAGGCGCTAACCGCCAAGCCGGCGCCGCCGCCCACCGCCGTGGACATCTTCAAGCTGTCCCGCTCCGACCTCGGCCGCCTCCGGTCCCAGCTGCCCCGCGGCGAGGGCGCGCCGCGGTACAGCACGTACGCGGTGCTCGCGGCGCACGTGTGGCGGTGCGCGTCGCTGGCGCGGGGGCTCCCCGCGGAGCAGCCCACCAAGCTGTACTGCGCCACGGACGGACGCCAGCGGCTGCAGCCGTCGCTGCCCGACGGCTACTTCGGCAACGTGATCTTCACGGCGACGCCGCTCGCCGAGGCCGGGAGGGTGACCGGGTCGCTGGCGGACGGCGCGGCGACGATCCAGTCGGCGCTGGACAGGATGGACAGCGGCTACTGCCGGTCGGCGCTGGACTACCTGGAGCTGCAGCCCGACCTGTCGGCGCTGGTCCGCGGCGCGCACACGTTCCGGTGCCCCAACCTCGGCCTCACCAGCTGGGTCCGACTGCCGATCCACGACGCCGACTTCGGCTGGGGGCGGCCGGTGTTCATGGGCCCCGGCGGCATCGCGTACGAGGGGCTCGCCTTCGTGCTCCCCAGCGCCAGCGGCGACGGCAGCCTGTCGGTGGCCATCTCGCTGCAGGCCGAGCACATGGAGAAGTTCCGCAAGATGATCTTCGACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MKINVRGSTMVRPAEETPRVRLWNSSLDLVVPRFHTPSVYFFRRGEAAAAEGGSYFDGERMRRALAEALVPFYPMAGRLAHDEDGRVEIDCNGEGVLFVEADAPGATVDDFGDFAPTMDLKRLIPTVDYTDGISSFPILVLQVTHFKCGGVALGVGMQHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRTLVRARDPPAPSHPHVEYQPAPAMLAPEPPQALTAKPAPPPTAVDIFKLSRSDLGRLRSQLPRGEGAPRYSTYAVLAAHVWRCASLARGLPAEQPTKLYCATDGRQRLQPSLPDGYFGNVIFTATPLAEAGRVTGSLADGAATIQSALDRMDSGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSASGDGSLSVAISLQAEHMEKFRKMIFDF</aaseq>

Gene Sequence

<dnaseqindica>1..426#2495..3397#ATGAAGATCAACGTGCGGGGGTCGACGATGGTGCGGCCGGCGGAGGAGACGCCGCGGGTGAGGCTGTGGAACTCTAGCCTGGACCTGGTGGTGCCGCGGTTCCACACGCCGAGCGTCTACTTCTTCCGGCGCGGCGAGGCGGCGGCGGCGGAGGGCGGGAGCTACTTCGACGGGGAGAGGATGCGGCGGGCGCTGGCGGAGGCGCTGGTTCCGTTCTACCCGATGGCGGGGCGGCTGGCGCACGACGAGGACGGCCGCGTGGAGATCGACTGCAACGGGGAAGGCGTGCTGTTCGTCGAGGCCGACGCGCCGGGCGCCACCGTCGACGACTTCGGCGACTTCGCGCCCACCATGGACCTCAAGCGCCTCATCCCCACCGTCGACTACACCGACGGCATCTCCTCCTTCCCCATCCTCGTGCTCCAGGTATCCAATTCTCCTCCATTTTTTCTCCTCACGCGTAGTAGGAATCTACTATTCTATTTCTACCGCCACCAACTCGATCGCTTGCCTGCGGGCGACGACCCGGTCAGCGCTCATGCAATTCAATTGCTAGGTGATTAGTGGCTGGCTGCATCATGCCAACAATTTTCTTTTCTTTTTTGGACCCTATCAAGCTCTAGCTTAGACCGAGTGAAGCCTCCATTCATGGTGCCAAATTGCCGACCAACCTACCTATGTGAATTATCGAAACACGTATGAATTTTTAGCATTTGTAGGCTTTTTTTAATATAGGGATTTTTCATTAATTTATTCCTGGTATGAATCGAAAAGAAAAAAAATCATACCTGTTGCAGAAAACATTTGTTAGTACTGGAATTTTCTACGGAAATGATTAGCTTTATTCCTTAGAAATTTCCTGGAATGGCCACATAAGCTCTCTGTTTTTATAGGCCTTCTATTAATACATGTCTCATGTCAACGATTATCTGAGTACGGTAATGACTAATGATTGGCCTGCGCACAGTTGAACCCTGTCATTAGATCCCATCAATTTGGAACATATGAATTTAAAAGATCTTTTGCGGGAAATTTAAAAGAAATTGTACAGCATGAAAACAACCTAGCCGTGTAATTGTTTGGTTAGAACCATATATTCTGACAGCTAGACAAGTCGAAAACTACCCTGAGAATTGGGGAAGGTGTTCTACCTACTTGAGTCCGACTTCTCGCTGTTGTTGTGACTTGCGAGCTATCATCGTTTCTTTTGTCAAACATGAAAGCGAAGTAGCGAACCAATTGTTTGATAAGATTGCCAGATCATATTTGTGCACAGCCTCACAATTGTCACAACTGCTCCAGTTGGTACATCATCAGCATCCACATGGGTGACCCCCTGACCCGGTTGAGATAGAGTGAGCTTAAGGGTGTGTTTAGTTCCTGAAAAAAGTTGGAAGTTTGAAGAAAGTTAGGAGTTTAAAAAAAAAGTTGAAAATTTATGTGTGTAGGAAATTTTTTTATGTGATATGATGTGATAGAAATTTGGGAATAGGGGAAACTAAACACGGCCTAACCAAACAACAAAATGTTAGTTATTTGCTGGACATCTTATTCTTCGGATGCACGACACATGTTGGTTGAAAGACAATGATGTACCAGCTAGAATGTAAAAAATAAATGTTTCTTTGTCTTTGCTTTGTGCTAGCAAGCAAACCTTAATTTGATTGATCGTTCCATATAGGGAGTGTTTAGATGGGCTAAAACTTTTTAGTACATGTCACATCGAATGTTTGGACGCTAATTTGAAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATAAGAGCTAATCTGCGAGACGAATTTTTTAAGCCTAATTAATCCATAATTATGAAAAGTTTATTGTAGCATCACATTATCAAATCATGGCGTAATTAGACTCAAAATATTCGTCTCGCGAATTAGTCCAAGATTATGGAATGGGTTTTGTAATTAGTGTATGTTTAATACTCTAAATTAATGTCCAAATATCCGATATGACAGGTAAGTCCCTGTTTCCCAAACAAGCCCATAGTCTGCCCTTAATCAGGTTCTCCAGCTGTATATTTTCTGTCTAGGCTCCATCTATGATCCCATAATTGAGTTCAGGCAGGTAAGGTGGTCTGCAACATCCAAGTTGGCTTGCCATGACCGAGACCTTGGGTATTATTCTAAGCAATCATTCGCTCATACGGAGTACACGTTTAGTGGGACAGAGGAAGTACGTTGAGATACAAGAGGTCAAATGAATTACTTCTAGACGATTGGAATTTAATATGATAACGTTAGTTGAACTAGAGGTATCTTAGTGAAACGGTAGGTGCAATAAAGAAGTTGTGTTTTCCCTTAAGCACATGGTGCTGTGTGATCTCGTCCTTTTTTTTTTCCACTCTAATAATGCTCAGGAGATTAAAGAAGTCTCGGTCACGTATAACTCTGTAAAAAGAATTTTGTAATCTTTGTGAAAGAACAGAGCGGTTAGTTAAACTTTGGCGCCATTTTGCTCCAGGTGACCCACTTCAAGTGCGGAGGCGTCGCCCTCGGCGTGGGCATGCAGCACCACGTCGCCGACGGCTTCTCCGGCCTGCACTTCATCAACTCGTGGGCGGACCTCTGCCGCGGCGTCCCGATCGCCGTCATGCCGTTCATCGACCGCACCCTCGTCCGCGCCCGCGACCCGCCGGCGCCGTCGCACCCGCACGTCGAGTACCAGCCGGCGCCCGCCATGCTGGCCCCCGAGCCGCCGCAGGCGCTAACCGCCAAGCCGGCGCCGCCGCCCACCGCCGTGGACATCTTCAAGCTGTCCCGCTCCGACCTCGGCCGCCTCCGGTCCCAGCTGCCCCGCGGCGAGGGCGCGCCGCGGTACAGCACGTACGCGGTGCTCGCGGCGCACGTGTGGCGGTGCGCGTCGCTGGCGCGGGGGCTCCCCGCGGAGCAGCCCACCAAGCTGTACTGCGCCACGGACGGACGCCAGCGGCTGCAGCCGTCGCTGCCCGACGGCTACTTCGGCAACGTGATCTTCACGGCGACGCCGCTCGCCGAGGCCGGGAGGGTGACCGGGTCGCTGGCGGACGGCGCGGCGACGATCCAGTCGGCGCTGGACAGGATGGACAGCGGCTACTGCCGGTCGGCGCTGGACTACCTGGAGCTGCAGCCCGACCTGTCGGCGCTGGTCCGCGGCGCGCACACGTTCCGGTGCCCCAACCTCGGCCTCACCAGCTGGGTCCGACTGCCGATCCACGACGCCGACTTCGGCTGGGGGCGGCCGGTGTTCATGGGCCCCGGCGGCATCGCGTACGAGGGGCTCGCCTTCGTGCTCCCCAGCGCCAGCGGCGACGGCAGCCTGTCGGTGGCCATCTCGCTGCAGGCCGAGCACATGGAGAAGTTCCGCAAGATGATCTTCGACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008609