BGIOSGA008612

From RiceWiki
Revision as of 03:18, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008612, complete gene.| tag = OJ1004_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008612, complete gene.

LocusTag

OJ1004_A05.37

Ensembl Transcript ID

BGIOSGA008612-TA

Ensembl Protein ID

BGIOSGA008612-PA

Length

4175

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25856695..25860869

Sequence Coding Region

25856695..25856980,25857243..25857310,25857418..25857641,25858022..25858105,25858984..25859197
,25860043..25860219,25860308..25860427,25860657..25860869

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25856695..25860869 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25856695..25860869 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCGTTGACCCGCTCGTCGTCCGTCCGTTCCGCCATCCGACGGCTCGGATCCTCCCGCGCCTTCTCCGCATCCGCCGCGGCGGCCCCGCGCCGCGACGCGAGGGGGGCGGCGGCCGCGGCGGTGGCGGTGGCTGCCGGGTCGGGGCTGGGGATCTGGCTGCTGCCGCCGTCGCCGCGGCCGCTGGCGGACTCCGGGCAGGCGGGGAATGAGGTGGCGGCGTTCGGCGACGTCGCGGAGGAGGAGGAGCGGGAGGAGAAGCGCAGGTTCCTGTTCGGAGACTCGTATCGCAGAAGGGTGTTCTTCAACTACGAGAAGAGGATTCGGACGCGCAGCCCTCCTGAAAAGATCTTTGAATATTTCGCGTCCATCCGGAACCCAGAGGGTGAAGTTTACATGTTACCCGCCGATTTGATGAGGGCGGTTGTCCCCGTTTTTCCTCCATCTGAATCGAAAATTGTCAGGGAAGGGAGTCTCAGGGGAGAGCGCAACCCTGGCGAGCTACACTGTGCCCCGTCTGAATTTTTCATGCTGTTTGACACGAACGGAGATGGGCTCATCTCCTTTGCCGAGTACATCTTTTTTGTGACATTGCTTAGCATTCCTGAATCAAGTTTCAACATAGCTTTCAAGATGTTTGACCTTGACCACAGTGGGGAAATAGACAAAGAAGAGTTTAAGAAAGTAATGGCACTGATGCGGTCCTATCATAGGCAAGGAGCTGCCCATAGGGATGGTTTACGTTTTGGTCTTAAGGTTGGTCAGTCAGTGGAAAATGGTGGACTGGTTGAGTACTTCTTCGGCAAGGATGGCAATGAACAGTTACGCTATGATAAGTTCTCCAATTTTTTGAAGCAATTGCATGATGAGATTGTTCGCTTGGAATTCAGTCACTATGATGTCAAATCATCCAAGACAATATCTGTGAAGGACTTTGCATTATCCATGATTGCTTCTGCAGATATGAATCACATAAACAAGCTACTTGACAGAGTTGATGATTTTGATGATTATCCTGATCTCAAGGATTTGCGCATTACCTTTGAGGAGTTCAAGGCTTTTGCTGATCTGCGGCGAAAATTAGAACCATTTGCAATGGCAATCTTCAGCTATGGCAAAGTAAACGGTTTGCTGACCAAGCAGGATCTAAAACGTGCAGCAACTCATGTTTGTGAAGTGGACTTGACTGATAAAGTGGTGGACGTCATTTTCCTTGTGTTCGATGCAAACCGGGATGGGAGCCTTAGCGCAGATGAGTTCTTGAGGGCATTGCAAAGACGAGAAAGTGATATTCGCCAGCCAGCTTCTTCAGGTTTAATGGGAGTATTTACCTGTTTGTTGAACTGTACAAAGTGTTCTCTTCAGCAGACTGTGATCTAG</cdnaseq>

Protein Sequence

<aaseq>MATALTRSSSVRSAIRRLGSSRAFSASAAAAPRRDARGAAAAAVAVAAGSGLGIWLLPPSPRPLADSGQAGNEVAAFGDVAEEEEREEKRRFLFGDSYRRRVFFNYEKRIRTRSPPEKIFEYFASIRNPEGEVYMLPADLMRAVVPVFPPSESKIVREGSLRGERNPGELHCAPSEFFMLFDTNGDGLISFAEYIFFVTLLSIPESSFNIAFKMFDLDHSGEIDKEEFKKVMALMRSYHRQGAAHRDGLRFGLKVGQSVENGGLVEYFFGKDGNEQLRYDKFSNFLKQLHDEIVRLEFSHYDVKSSKTISVKDFALSMIASADMNHINKLLDRVDDFDDYPDLKDLRITFEEFKAFADLRRKLEPFAMAIFSYGKVNGLLTKQDLKRAATHVCEVDLTDKVVDVIFLVFDANRDGSLSADEFLRALQRRESDIRQPASSGLMGVFTCLLNCTKCSLQQTVI</aaseq>

Gene Sequence

<dnaseqindica>1..286#549..616#724..947#1328..1411#2290..2503#3349..3525#3614..3733#3963..4175#ATGGCCACCGCGTTGACCCGCTCGTCGTCCGTCCGTTCCGCCATCCGACGGCTCGGATCCTCCCGCGCCTTCTCCGCATCCGCCGCGGCGGCCCCGCGCCGCGACGCGAGGGGGGCGGCGGCCGCGGCGGTGGCGGTGGCTGCCGGGTCGGGGCTGGGGATCTGGCTGCTGCCGCCGTCGCCGCGGCCGCTGGCGGACTCCGGGCAGGCGGGGAATGAGGTGGCGGCGTTCGGCGACGTCGCGGAGGAGGAGGAGCGGGAGGAGAAGCGCAGGTTCCTGTTCGGAGGTGAGGGCATTTGATTTTTGTTTTTTTTTTTATTGTTCATGCGTGTTGTTTTGGGTTGTAATGCGGGCGATTTTTGGCGCGTTTATGGCGGGGGAGAGCGACTGGGTTTCATTCCCATTGTTTTCGTCGATACTAATTTTGCGTGAAAAGCGAATTTGTCCAGTAGTATTTTGCTACTCGTTTATTCGCCTCTGAAAAATTTTAAATCCGCTATTTTACAAACGGCACGATGATTTTCGTCGCAATGTTTCCTCGAATGTAGACTCGTATCGCAGAAGGGTGTTCTTCAACTACGAGAAGAGGATTCGGACGCGCAGCCCTCCTGAAAAGGTAGCGACCAATGTGCCATATTCAGAGCAATTTTGTGTATACACAACATGACATGATAATTCTTCTTGGTTTGTGTAGTAATAATTGTGTGGTGTTTTTACTGCAAGATCTTTGAATATTTCGCGTCCATCCGGAACCCAGAGGGTGAAGTTTACATGTTACCCGCCGATTTGATGAGGGCGGTTGTCCCCGTTTTTCCTCCATCTGAATCGAAAATTGTCAGGGAAGGGAGTCTCAGGGGAGAGCGCAACCCTGGCGAGCTACACTGTGCCCCGTCTGAATTTTTCATGCTGTTTGACACGAACGGAGATGGGCTCATCTCCTTTGCCGAGTAAGTAGCGACTCACTGATTTGTGTCCTTAGGCGTGGTATCTAATTTCAGAACCAGACAGAATTGTTTGCACCCGGCACAATTATTGTCATGTAGTGATTTACAGAAAATGCACCAGGTTCTATTGGCAAGTAGAACAGTCTGTTTGCTAGCCATATTGGGTTTGAATCCTCCCTTAAACACATTGTGTGGACCATACATTAAGTTGCCATAAGCATAACGTCATTGCAACTAATAATCACCAATGCTTAGATATGAGCATTTTGGTTAATGAGTGCCACTGGTATGGTATGACATTAACTTTATATGCTGCTCTATTGTTTTATTGAATGAAGGCAGAAGTAACTTGATGAATTTGCTGAAACTGCTTGCCATGACAGGTACATCTTTTTTGTGACATTGCTTAGCATTCCTGAATCAAGTTTCAACATAGCTTTCAAGATGTTTGACCTTGACCACAGTGGGTAAGCTATCCTCCAGCTCCTCGACCTGGTTGTAAACTTATAACCAAATACTGTGCTCTTCAGATCTATATGCATCTATTCCTTAATTGTACAAGCACCTTAACCATTTTCATTAAAAAATGTATTTCACTTACAAATTTTAGTTTGAAGTGTACTTCATTAATTTATACTAACTGATGTTTCTTTAATTATGATGGCTGCATGTATATTCTATGATAGCATCCCTACATTCTCTTCTCTTGAATGGACTTGATCATACCGTGTATAGAGCTTACAGATTACCAGTATGCTACTATGCTCCATTGCCAAACCCCCATTCATGATAGAAGGACCTTACAGTCTTACACAAGAGACCTAAGGAATAGTCCACCCATACACTAACTATATATGTGCAGCATCATTCTGGTATAATCAGTTTTTCCCTATAGCCTATGCCAAACCTCAACTCTAGGAGTCCTGCAAACAAATTAATGTCATTGGTCACTGGCGAATGTATATCAAATTCTCAGTTAATTACTATCAACATTGCATGCTTGCAAGGTTGCCGGGAGCTAAATAAGAAAGATTTGACAGCCCTAATCTATTCACTTATGCATTTTTCATCTAATTTCTGAACTTTATTATTTGCTGAAGCCTTTAAAGGTACTATAAGTATACTATCCCCTTTTCCCTAGGATTTACACAAGGATAAATTGAATATATTGTTGTTTACATGTGACAATTCATGTGCAGTTAAATTTGTGGTCCAGAAAAGACCTGCTTTTATGAGCATGTTCAATCATCTCACTTGTTAGTTGATGGTAAAGAAGGGTATGGACAATTTGGCAATTTTTTTTAATGCTATTTCTTTACTCTAATCTGGCATTTGAATTTCGCAGGGAAATAGACAAAGAAGAGTTTAAGAAAGTAATGGCACTGATGCGGTCCTATCATAGGCAAGGAGCTGCCCATAGGGATGGTTTACGTTTTGGTCTTAAGGTTGGTCAGTCAGTGGAAAATGGTGGACTGGTTGAGTACTTCTTCGGCAAGGATGGCAATGAACAGTTACGCTATGATAAGTTCTCCAATTTTTTGAAGCAATTGCATGATGAGGTGATTTTTTTTAAAAAAATTCATCCTTTGTTCCAATAACATAATTATGGTTCCAAACTATCTTATTCTGAATGCAACACATGAGAGACTTGAACTGAAAGCTAAATATTTTTTTTGTACTTTCATCCTTTGTTTCATTAACATCATTATGGTTCCGAACGATCTTATTGTGGATGCAGCATTTCAGAGACTTGAACTAAAAGCTACTTCCTTTCCCAAAATAAGGGATTTTGGGTGGATGTGGCACATTGTCTGTCTAGATTCATAGCACTTCGATGTGTCATATGCACCCAAAATCCCTTATATTTTGGGACGGAGGGAGTAAATAATTTTTCCAGACTATCTAATCACATAAGGAAGTAAAGGAGGGTAGGAAATAACACCTCGACAACCCACATGCCACATCCCTAATATAATTATACAAGCACAACATTTGCTGAATTTCCTTGTTTTTATATTTTGTGATGTGTTGCCACTGAAGAACAACACTATGCAAAGGTCAAAGTCCAATGCCTGTACATTCATTGATTTGTTTTGTCCTAGTGTAATTGGAGAACTGTCATTGTGTTCTTGCTCTAAAGCAGCATTTCAGAATCCATAGAAAACCAAAAGTGGGATCAACAAAGAAACATAAAGTTGAGATTATAAACCCCAGAACTACTATACCACACCCAATGTGTTGTACATTTTATAGAATGCCCCAGTACAACATAGGGGTAAAAAATTTACTTGCTGTGTATTTGTGTAGCGGGTATACGCGTGATTAATCTGTTATTGCCTCTGGTCCAGTTTGTCATCATTGTATATACTTGATATCTCATAATTTTTCATTCAATTATCTGCAGATTGTTCGCTTGGAATTCAGTCACTATGATGTCAAATCATCCAAGACAATATCTGTGAAGGACTTTGCATTATCCATGATTGCTTCTGCAGATATGAATCACATAAACAAGCTACTTGACAGAGTTGATGATTTTGATGATTATCCTGATCTCAAGGATTTGCGCATTACCTTTGAGGTTTGAAAGTTTGCTATCCAGATATTCCAATTGTAGTACTTGGGTTTAATGTCTCTCTTTATCATCATAATTATTACCTGAACTTCAGGAGTTCAAGGCTTTTGCTGATCTGCGGCGAAAATTAGAACCATTTGCAATGGCAATCTTCAGCTATGGCAAAGTAAACGGTTTGCTGACCAAGCAGGATCTAAAACGTGCAGCAACTCATGTAAGATTCTTCATAATTCCGTTTATTTCCTTTTGACATAAGATGTAGTCTGAATCAGCTAATGTTAATGTAAGTCTTAAGCTATTTTGGACTATCACTGGCTTGTTTCATATTTCCAGCCCTGTGCTAACTGAACAGCTAGGTCCTAGGTCTTGGGAGTAGGACCTTCCCAAGACACCCACATAATTGGCTGCATTTTCTGATTGACTTTACAACATTTTTTTTATAGGTTTGTGAAGTGGACTTGACTGATAAAGTGGTGGACGTCATTTTCCTTGTGTTCGATGCAAACCGGGATGGGAGCCTTAGCGCAGATGAGTTCTTGAGGGCATTGCAAAGACGAGAAAGTGATATTCGCCAGCCAGCTTCTTCAGGTTTAATGGGAGTATTTACCTGTTTGTTGAACTGTACAAAGTGTTCTCTTCAGCAGACTGTGATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008612