BGIOSGA008619

From RiceWiki
Revision as of 03:18, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008619, complete gene.| tag = OJ2055_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008619, complete gene.

LocusTag

OJ2055_H10.24

Ensembl Transcript ID

BGIOSGA008619-TA

Ensembl Protein ID

BGIOSGA008619-PA

Length

4168

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26018809..26022976

Sequence Coding Region

26018809..26019043,26019128..26019818,26020566..26020648,26020919..26021007,26021166..26021239
,26021327..26021377,26021604..26021680,26022174..26022976

Genome Context

<gbrowseImage1> name=IndicaChromosome02:26018809..26022976 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:26018809..26022976 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTGCAAACAACTGGCTGGGCTTCTCGCTCTCCGGCCAAGAGAATCCGCAGCCTCACCAGGATAGCTCGCCTCCGGCAGCCATCGACGTCTCCGGCGCCGGCGACTTCTATGGCCTGCCGACGTCGCAGCCGACGGCGGCCGACGCGCACCTCGGCGTGGCGGGGCATCATCACAACGCCTCGTATGGCATCATGGAGGCCTTCAATAGGGGAGCTCAAGAGGCACAAGATTGGAACATGAGGGGGCTGGACTACAACGGCGGCGCCTCGGAGCTGTCGATGCTCGTCGGCTCCAGCGGCGGCAAGAGGGCGGCGGCGGTGGAGGAGACCGAGCCGAAGCTGGAGGACTTCCTCGGCGGCAACTCGTTCGTCTCCGAGCAAGATCATCACGCGGCGGGGGGCTTCCTCTTCTCCGGCGTCCCGATGGCCAGCAGCACCAACAGCAACAGCGGGAGCAACACTATGGAGCTCTCCATGATCAAGACCTGGCTCCGGAACAACGGCCAGGTGCCCGCCGGCCACCAGCCGCAGCAGCAGCAGCCGGCGGCCGCGGCCGCCGCCGCGCAGCAGCAGGCGCACGAGGCGGCGGAGATGAGCACCGACGCGAGCGCGAGCAGCTTCGGGTGCTCCTCCGACGCGATGGGGAGGAGTAACAACGGCAGCGCGGTCTCGGCGGCGGCCGGCGGGACGAGCTCGCAGAGCCTGGCGCTCTCGATGAGCACGGGCTCGCACTCGCACCTGCCTATCGTCGTCGCCGGCGGCGGGAACGCCAGCGGCGGAGCGGCCGAGAGCACATCGTCGGAGAACAAGCGGGCCAGCGGCGCCATGGATTCGCCGGGCGGTGGCGCGATAGAGGCCGTGCCGAGGAAGTCCATCGACACGTTCGGGCAAAGGACCTCGATATATCGAGGTGTAACAAGGCATAGATGGACAGGGCGATATGAGGCTCATCTCTGGGATAATAGCTGTAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGGTGGCTATGACAAGGAGGATAAAGCAGCGAGAGCTTATGATTTGGCAGCTCTGAAGTATTGGGGCACAACAACAACAACAAATTTCCCAATAAGTAACTATGAAAAAGAGCTAGATGAAATGAAACATATGACCAGGCAGGAGTATATTGCATACCTAAGAAGGAATAGCAGTGGATTTTCTCGTGGTGCATCGAAATATCGTGGTGTAACCAGGCACCATCAGCATGGGAGATGGCAAGCAAGGATAGGGAGGGTTGCAGGAAACAAGGACCTCTACTTAGGCACCTTCAGCACCGAGGAGGAGGCGGCGGAGGCGTACGACATCGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCACCAACTTTGACATGAGCCGCTACGACGTCAAGAGCATCCTGGAGAGCAGCACGCTGCCGGTGGGCGGCGCGGCGAGGCGGCTGAAGGAGGCGGCGGACCACGCGGAGGCGGCCGGCGCCACCATCTGGCGCGCCGCCGACATGGACGGCGCCGGCGTCATCTCCGGCCTGGCCGACGTCGGGATGGGCGCCTACGCCGCCTCGTACCACCACCACCACCACCACGGCTGGCCGACCATCGCGTTCCAGCAGCCGCCGCCGCTCGCCGTGCACTACCCGTACGGCCAGGCGCCGGCGGCGCCGTCACGCGGGTGGTGCAAGCCCGAGCAGGACGCCGCCGTCGCTGCCGCCGCGCACAGCCTCCAGGACCTCCAGCAGCTGCACCTCGGCAGCGCCGCCGCCCACAACTTCTTCCAGGCGTCGTCGAGCTCGACGGTCTACAACGGCGGCGGCGGCGGGTACCAGGGCCTCGGTGGCAACGCCTTCTTGATGCCGGCGAGCACCGTCGTGGCCGACCAGGGGCACAGCAGCACGGCCACCAACCATGGAAACACCTGCAGCTACGGCAACGAGGAGCAGGGGAAGCTCATCGGGTACGACGCCATGGCGATGGCGAGCGGCGCCGCCGGCGGCGGGTACCAGCTGTCGCAGGGCTCGGCGTCGACGGTGAGCATCGCGAGGGCGAACGGCTACTCGGCCAACTGGAGCTCGCCTTTCAATGGCGCCATGGGATGA</cdnaseq>

Protein Sequence

<aaseq>MASANNWLGFSLSGQENPQPHQDSSPPAAIDVSGAGDFYGLPTSQPTAADAHLGVAGHHHNASYGIMEAFNRGAQEAQDWNMRGLDYNGGASELSMLVGSSGGKRAAAVEETEPKLEDFLGGNSFVSEQDHHAAGGFLFSGVPMASSTNSNSGSNTMELSMIKTWLRNNGQVPAGHQPQQQQPAAAAAAAQQQAHEAAEMSTDASASSFGCSSDAMGRSNNGSAVSAAAGGTSSQSLALSMSTGSHSHLPIVVAGGGNASGGAAESTSSENKRASGAMDSPGGGAIEAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTTTTTNFPISNYEKELDEMKHMTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSTLPVGGAARRLKEAADHAEAAGATIWRAADMDGAGVISGLADVGMGAYAASYHHHHHHGWPTIAFQQPPPLAVHYPYGQAPAAPSRGWCKPEQDAAVAAAAHSLQDLQQLHLGSAAAHNFFQASSSSTVYNGGGGGYQGLGGNAFLMPASTVVADQGHSSTATNHGNTCSYGNEEQGKLIGYDAMAMASGAAGGGYQLSQGSASTVSIARANGYSANWSSPFNGAMG</aaseq>

Gene Sequence

<dnaseqindica>1..235#320..1010#1758..1840#2111..2199#2358..2431#2519..2569#2796..2872#3366..4168#ATGGCTTCTGCAAACAACTGGCTGGGCTTCTCGCTCTCCGGCCAAGAGAATCCGCAGCCTCACCAGGATAGCTCGCCTCCGGCAGCCATCGACGTCTCCGGCGCCGGCGACTTCTATGGCCTGCCGACGTCGCAGCCGACGGCGGCCGACGCGCACCTCGGCGTGGCGGGGCATCATCACAACGCCTCGTATGGCATCATGGAGGCCTTCAATAGGGGAGCTCAAGAGGCACAAGGTATGCATGCACGCGTGTGTCTCTCGTTTTCTAGTAGTACATGGAGTGATGGGTGTTTGATCTTGATATTTGATGTGAACGCAGATTGGAACATGAGGGGGCTGGACTACAACGGCGGCGCCTCGGAGCTGTCGATGCTCGTCGGCTCCAGCGGCGGCAAGAGGGCGGCGGCGGTGGAGGAGACCGAGCCGAAGCTGGAGGACTTCCTCGGCGGCAACTCGTTCGTCTCCGAGCAAGATCATCACGCGGCGGGGGGCTTCCTCTTCTCCGGCGTCCCGATGGCCAGCAGCACCAACAGCAACAGCGGGAGCAACACTATGGAGCTCTCCATGATCAAGACCTGGCTCCGGAACAACGGCCAGGTGCCCGCCGGCCACCAGCCGCAGCAGCAGCAGCCGGCGGCCGCGGCCGCCGCCGCGCAGCAGCAGGCGCACGAGGCGGCGGAGATGAGCACCGACGCGAGCGCGAGCAGCTTCGGGTGCTCCTCCGACGCGATGGGGAGGAGTAACAACGGCAGCGCGGTCTCGGCGGCGGCCGGCGGGACGAGCTCGCAGAGCCTGGCGCTCTCGATGAGCACGGGCTCGCACTCGCACCTGCCTATCGTCGTCGCCGGCGGCGGGAACGCCAGCGGCGGAGCGGCCGAGAGCACATCGTCGGAGAACAAGCGGGCCAGCGGCGCCATGGATTCGCCGGGCGGTGGCGCGATAGAGGCCGTGCCGAGGAAGTCCATCGACACGTTCGGGCAAAGGACCTCGATATATCGAGGTGTAACAAGGTTAGAACAATATTGGTTTGTCTATGCTACTATGGCTAGCTACATGCCTACATACTGATCGATGATGGATTGCTGATTCCTTTCAAATGGAAGGCACCGTTAGTTAGAAAATTAATGATCTCCTTTTTGAGTCGAGGCGCGATCGATCTATCGAGAACATAAACTATCATCAGATCTATGGTTCTATACTAGATAGCTAGCTAACTGCAATCGAATTTAGATAAATAATAATGCAATCGCTCGATCGAGACAGTGGCTATATATGCAACTTTGAGTTAGTATATAGTTTATGTGATCCTTTGGAAAGGTAATTGGGTATAGGCTATATATGTAGAAAGTTCATTGATCTAAGAAAAGGAGGACAATGAAATTAGATGTTGATGATACGGAATTAGTATGGAGTTAGACTAACTTCGTTAACAAGCTAAATATACGATTGGGAAGTAAATAATTTTGTTCACAAGAAATAGGAGCCACACTAGTATTGGTAATTGTTGATAGATACGATATTACTAATTCTGGTATATATTGCCCATATTCTAACCAATTGAAAAAAGATCAAAAACATGCTAATACTTTTGCTTATTAATTTTTCTCACTAATGTTCTATTGCACACATATGCGCTTAGATCGAACATGCAAGGATGTCAACCAATGTTTATATTTTTTTTCAGACGTGATTTTGAATCTTAATAGCATGCATATGAGCTTTAGTAAATTACCTGCTCTTGAAATTGTTGGTTTCAGGCATAGATGGACAGGGCGATATGAGGCTCATCTCTGGGATAATAGCTGTAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGGTAATGCAAAATGATTATATATCATCTCTTTTCTCCCTCCAGCATAACACTACGTATGTATATATGTACACTTAATTTACAGTACTGATTAAGCATTCTTTCAATTCGTCTGTTCCCCATCGCCTAATGACTCTATCCGGAATGACACCGTTATGCTCCGCAATGCGCAGTTTATCTTGGTATGCATGCAAACGCCTTCAGTTTTTTTTTCATTGTATATAACTATATTAGTGACTGCACAATCATTATACTTGTATCACGACTACTCAGGTGGCTATGACAAGGAGGATAAAGCAGCGAGAGCTTATGATTTGGCAGCTCTGAAGTATTGGGGCACAACAACAACAACAAATTTCCCAGTAAGAAATTAAACATATAAGTTTGTCGTTTTAGTTTTCTAGCTAGCTTGTTAATAGATCATAGTTTTCTACACACCACTTATAATACAGTATATAAAAATTAAATTGTGCACTTGTTGATTGCATTTTCCCTTTTTTATTATAAAATTTCACTGCAGATAAGTAACTATGAAAAAGAGCTAGATGAAATGAAACATATGACCAGGCAGGAGTATATTGCATACCTAAGAAGGTAACTGATGTTTCACCATATGGAATTATCACTCCCAGAATATCAGACTATCACACTGAGATATGATTTCATTAATTAAATATGCAGGAATAGCAGTGGATTTTCTCGTGGTGCATCGAAATATCGTGGTGTAACCAGGTAATTAATTGATTTATGTTTTCTTCCTAGCTAGTAGTATACAAAAAAGCACGCAATGTACTAGATGTGCTTGTTGTCCTTATTTATATGTATTATGAACTACTAATCTCTAAGCTATGTCAACATATATGTACACGGCTCATGTTAACTGTATATGCTTAAATTTTGTAGTGATATTTTGGTGTTCCAATGTTGTAATATAGATTAACATATAATTTTTGAGCAGGCACCATCAGCATGGGAGATGGCAAGCAAGGATAGGGAGGGTTGCAGGAAACAAGGACCTCTACTTAGGCACCTTCAGTAAGCTGCTACACTGATCTTAGACCTGTCTCATCTAAACTTAATCGCTCTCCTAATGAAGATCCTTAAAACTAATCAATGACTAGTCATAGTGTTATATCCCCAAGATCTAAGTCATCGACCCGTACTAATTTAGTCCTTTTTTCTTGAAATCTTCGTACGTCTCGTAGAACTGAAGATTAGATATTCTATATGTTGCCCTATGGCGCATAAAATAGTAGTACTCCCAGTTAGCGCATTAACTATGTCCGAAATGTACCTTTCAAAGTTTTTGTCTCAAAGTTGTCTGAGAAAACCGGGGCATGGAGTCAAGGGCCAAGTAGAAAACCCTAGCCCCTTTGAATTTTAATCACACAGCTCTAGCTTTGCCCTTTGCTTGCACCGTCCATGCGTGCATGCATGCATGCAATATGGAACATGTTGCACACATGCGTTTGGGAAACAAAAACCCTAATCATATGCATCTGATCATGATGATAATCGTTGCGTATAGGCACCGAGGAGGAGGCGGCGGAGGCGTACGACATCGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCACCAACTTTGACATGAGCCGCTACGACGTCAAGAGCATCCTGGAGAGCAGCACGCTGCCGGTGGGCGGCGCGGCGAGGCGGCTGAAGGAGGCGGCGGACCACGCGGAGGCGGCCGGCGCCACCATCTGGCGCGCCGCCGACATGGACGGCGCCGGCGTCATCTCCGGCCTGGCCGACGTCGGGATGGGCGCCTACGCCGCCTCGTACCACCACCACCACCACCACGGCTGGCCGACCATCGCGTTCCAGCAGCCGCCGCCGCTCGCCGTGCACTACCCGTACGGCCAGGCGCCGGCGGCGCCGTCACGCGGGTGGTGCAAGCCCGAGCAGGACGCCGCCGTCGCTGCCGCCGCGCACAGCCTCCAGGACCTCCAGCAGCTGCACCTCGGCAGCGCCGCCGCCCACAACTTCTTCCAGGCGTCGTCGAGCTCGACGGTCTACAACGGCGGCGGCGGCGGGTACCAGGGCCTCGGTGGCAACGCCTTCTTGATGCCGGCGAGCACCGTCGTGGCCGACCAGGGGCACAGCAGCACGGCCACCAACCATGGAAACACCTGCAGCTACGGCAACGAGGAGCAGGGGAAGCTCATCGGGTACGACGCCATGGCGATGGCGAGCGGCGCCGCCGGCGGCGGGTACCAGCTGTCGCAGGGCTCGGCGTCGACGGTGAGCATCGCGAGGGCGAACGGCTACTCGGCCAACTGGAGCTCGCCTTTCAATGGCGCCATGGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008619