Os09g0400100

From RiceWiki
Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0400100| Description = Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)| Version = NM_001069646.1 GI:115479034 GeneID:4346990| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0400100

Description

Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)

Version

NM_001069646.1 GI:115479034 GeneID:4346990

Length

1084 bp

Definition

Oryza sativa Japonica Group Os09g0400100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14640777..14641860

Sequence Coding Region

14640942..14641436

Expression

GEO Profiles:Os09g0400100

Genome Context

<gbrowseImage1> name=NC_008402:14640777..14641860 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14640777..14641860 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctggcagtccctgatgccgccgacgcagttgccggtgatgcccttccctcccgggacgatggcgtacgccggcagctccagcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaacagcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgccgccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctccagcgcctcccgccgcttccccggcgacgtgctgatgacggtgacgcgcatcccgaacgccttggcgaacttgacggcgacgtggccgagcccgccgaggccgaccacgccgacgtgcttccccggcgcgttcagcccgtggatcaccatcgggctgtacaccgtcacgccggcgcacagcagcggcgccgcgccgtccagcggcagccccgccggcacgcggagcacgtag</cdnaseq>

Protein Sequence

<aaseq>MAWQSLMPPTQLPVMPFPPGTMAYAGSSSGLVGAPTNTICAIGF ISANSGATGCHADTVLRIPSMVPAAAAIWPASRLTRNSSAPRCSSASRRFPGDVLMTV TRIPNALANLTATWPSPPRPTTPTCFPGAFSPWITIGLYTVTPAHSSGAAPSSGSPAG TRST</aaseq>

Gene Sequence

<dnaseqindica>166..660#tatatcttgtcgtcgccggagccgccgaggctgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctccatcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgccggcgaagtcgagcatggcctggcagtccctgatgccgccgacgcagttgccggtgatgcccttccctcccgggacgatggcgtacgccggcagctccagcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaacagcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgccgccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctccagcgcctcccgccgcttccccggcgacgtgctgatgacggtgacgcgcatcccgaacgccttggcgaacttgacggcgacgtggccgagcccgccgaggccgaccacgccgacgtgcttccccggcgcgttcagcccgtggatcaccatcgggctgtacaccgtcacgccggcgcacagcagcggcgccgcgccgtccagcggcagccccgccggcacgcggagcacgtagtgttcgttcacgacgatggcgtcggagaagccgccctgggtggccgcgccgccgtagtccttgccgttcgacgtgatcaccatcgtcgggcagtagttctcgtaccccttgccgcagctgtcgcaggtgcggcacgacccgacgaagaagcccacgcccaccgtgtcgccggccttgaacttggtcacgccggcgccgacgccggtgacgacgccgacgatctcgtggccggggacgacggggtacatggcgttgccccaatcgttcttgacgacgtgcaggtcggtgtggcagatgccgcagtagagcaccttgatggtgacgtcatcgtccttctgagccctgaaatgtttttgtcagcagcagcagctgataagattatccatcagacagattagccttaaaagtgacagttcatagcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0400100, RefSeq:Os09g0400100