Os12g0593000

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Revision as of 10:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0593000| Description = Similar to Extra-large G-protein| Version = NM_001073707.1 GI:115489375 GeneID:4352684| Length = 4860 bp| Definitio...")
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Gene Name

Os12g0593000

Description

Similar to Extra-large G-protein

Version

NM_001073707.1 GI:115489375 GeneID:4352684

Length

4860 bp

Definition

Oryza sativa Japonica Group Os12g0593000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25076199..25081058

Sequence Coding Region

25076444..25077041,25077167..25077333,25077486..25077733,25077907..25078084,25078279..25078455
,25078542..25078646,25078716..25078853,25079840..25080091,25080722..25080919

Expression

GEO Profiles:Os12g0593000

Genome Context

<gbrowseImage1> name=NC_008405:25076199..25081058 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25076199..25081058 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgggggagtactcgttcgcggcggagtacgacggcccgccgctgccctactcgctgccgcgcgccatcccgctcgacctgtcgcggatcccgctcgcctcgctctcgtcccccacctcgccaccgccacccacggcgccgccgctccccgtcgtgcgccccctcacgccctcctccctctgctccgccgagtcaaagcgggattcgctggggagaggctcacgtgtgctgcggcggctgctcagcgccacggaggtggagcttgtcatgaggagcgagcgggaatgcgccgccaaccagctgcgaccggaggacgtgtatgtgaatggcaccaagctgtcgccggaggagctcgtcatgctgcaggggtgccagtgccctccttctaagctccggccggggttctattggtacgacaaggtttccggcttctggggaaaggagggtcacaagccccattgcataataagcccaaatctaaatgttggaggcgctctagatcaaaaggccagcaacgggaacactgggatcttgataaacggccgcgagattacgaaatctgagctgcaaatgcttaagttggcaggagttcaatgtgctggaaaacctcacttttgggtgaatgctgatgggacttaccaagaggaaggacaaaaaacagttaaaggcaagatttgggataagcctattgtgaagctgcttagtcctgtcctatcactgccaacgcctaacaaagcaaataatcaatgcggtgaagagccagtgaatgtggtaaatcgacccatccctgactacttggagcaaaggaccattcagaagctcctgttggttggatcagggacaaacaccatactcaagcaggccaagttcttgtacaagagcagaccattttctgtagaggagtgtgaagatctcagacttatcatacaaagtaacatatacaactaccttggtatactacttgaagggcgtgaaagatttgaagaggaagctatagctgacagaagaactacctgccaaagtgatccttctagctctggccattgtgaaccagagctttgtaatgacattactgagtactatattgctccacgcctgaaagcattctctgattggattctaaaagctatggccataggtaatcttgaagacattttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgctattcaagctacatataaccggagaagtgaactgccattccttccatctgctgctagttatttccttgacaaggctgttgatatttcccgaacggaatatgagctctctgatatggatatcctttacgctgatgggataacatcctcagatgggttagcatctacagatttctccttcccacaactggctttggacgggcggggttttgatgagccagatccacaagacactttgctaaggtaccaactaataagaataaacaacaaaggattgcatgagaactgtaaatggctgcaaatgttcgatgatgtgaggcttgttatcttctgtgttgcggtcagcgactatgatgagtactacgaggatgcaaacggcaatgttgtgaacaagatgatggagaccaggcagctatttgagagcattgcccttcatccgatatttgagcagatggatttccttctacttctcaccaagtttgatatcctagagcagaagatcggcaaatctcctttaacatcatgcgactggttcagcgacttcactcccctggtaagccgcaatctgatcaacggcaccagcaaaagctcgcggggcagctccactggctcgacattggcgcagatggcgggtcactacattgcggtgaagttcaagagcgtattccagtcgttcacggagcggaaactctacgtgtcctacgtgaacgccctggaccaggagtcggtccgctccgcgatccgctatggaagggagatcatcaagtgggaagacgagaagcccgtgtttgggtccagcgagacgacatacagcgaggagccgagctcctactctcactga</cdnaseq>

Protein Sequence

<aaseq>MAAAGEYSFAAEYDGPPLPYSLPRAIPLDLSRIPLASLSSPTSP PPPTAPPLPVVRPLTPSSLCSAESKRDSLGRGSRVLRRLLSATEVELVMRSERECAAN QLRPEDVYVNGTKLSPEELVMLQGCQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIIS PNLNVGGALDQKASNGNTGILINGREITKSELQMLKLAGVQCAGKPHFWVNADGTYQE EGQKTVKGKIWDKPIVKLLSPVLSLPTPNKANNQCGEEPVNVVNRPIPDYLEQRTIQK LLLVGSGTNTILKQAKFLYKSRPFSVEECEDLRLIIQSNIYNYLGILLEGRERFEEEA IADRRTTCQSDPSSSGHCEPELCNDITEYYIAPRLKAFSDWILKAMAIGNLEDIFPAA SREYAPMVEELWKDPAIQATYNRRSELPFLPSAASYFLDKAVDISRTEYELSDMDILY ADGITSSDGLASTDFSFPQLALDGRGFDEPDPQDTLLRYQLIRINNKGLHENCKWLQM FDDVRLVIFCVAVSDYDEYYEDANGNVVNKMMETRQLFESIALHPIFEQMDFLLLLTK FDILEQKIGKSPLTSCDWFSDFTPLVSRNLINGTSKSSRGSSTGSTLAQMAGHYIAVK FKSVFQSFTERKLYVSYVNALDQESVRSAIRYGREIIKWEDEKPVFGSSETTYSEEPS SYSH</aaseq>

Gene Sequence

<dnaseqindica>4018..4615#3726..3892#3326..3573#2975..3152#2604..2780#2413..2517#2206..2343#968..1219#140..337#gcatgctccaaaaaaggtgaagctctctccctcctccacctttcccctcccccctcctcgcctagggtttcccacccccaccatgcctcaccccccccgaaccctaaccctaaccctaacctagcctagtgcggcgaccatggcggcggcgggggagtactcgttcgcggcggagtacgacggcccgccgctgccctactcgctgccgcgcgccatcccgctcgacctgtcgcggatcccgctcgcctcgctctcgtcccccacctcgccaccgccacccacggcgccgccgctccccgtcgtgcgccccctcacgccctcctccctctgctccgccatccacggccaccgcgccggggtttcctccgctgctgctggtgccgccgcggcgcagtcgtcgtcatcgtcgtcctccgctgccgcctccgcctccgcgggtggtggtggtggggttgctggggcagcggcggtggattcacccacctccgtcatcgagaaccaccacgcggctctccaccactccgccgagctcccgtcgacgccctccgacgacgacgagaacgcggatgaggacgactacgatggacgcagggcgggtgcgccgccgccgccgctgttgaagtcccaccaccagcccatggtcaccttcgcggagaccagcggctccctcctccaatcctcggaagacgacgacgacgacgaggaggatgaggaggaagacgaggaatacggcgaggacgccatgcccgtgcgatcgagcggctccctctcccccgcgcactggaggggagcctccaaatcccgtggttgcttcagatgcgggaaagggggcagcttctgggcccgcggggacaaggaggcttgcctcgcctgcggcgcgcggtactgcggtggttgcttgctccgggcgatggggtccatgccggaggggcgcaagtgcctggactgcatagggcggccggtggccgagtcaaagcgggattcgctggggagaggctcacgtgtgctgcggcggctgctcagcgccacggaggtggagcttgtcatgaggagcgagcgggaatgcgccgccaaccagctgcgaccggaggacgtgtatgtgaatggcaccaagctgtcgccggaggagctcgtcatgctgcaggggtgccagtgccctccttctaagctccggccggggttctattggtacgacaaggtttccggcttctggggaaaggtaactgcctgtaaagatttgatctttttggtgcttgcttgccgacacatttgattgaagcgcgtaatgcagtagtttgatgttaaaattatttttaggtaattgaatttagtatgtggtaaatatagttggtaagcaacagatcgataaattcttaagagatctttaggagagttagctgttgtgtggctattattgaattgcacagttaatgatgttattcccatgtgtataatttgaagagctgtgttttttatggtttgaaaatgagcactaaattatcatatttgaagtgaaagattccttgtatgcggtctagggttttccattttctgaactacgactagatgataatttactttattttgacatatatgcttttgcctagattgaaatgattaggatgtatatatttatttggaaccaacacatggtctggagggatagtgctgctgagcttgatattgtggaattttttggtgtactactatatatttgtaaaactgattatgacatctctgattaattggcacaattagagctttgaatgatttatcgaagtcttaggaatctgggtggatagtatagtatgaaacaaatgagaagttagtacttctgagcatgttgttttagatcagcagaatattgcacatctaggctggcacctgacgtgtatgatattatatggaaactaactacgcagaatctttcttgaagtaccaacatgatggcatggcttagatggatgaccatagtctgtgcatgtacaaagtaattaaatcataacacatcatagattgtttcggtgtctggctgctttcgtttaggtaggcttgggctttataaggaaaattaatggcaagaaaattctgcatgatgcagctggcttgattgttcctacaaatatttactgtagtagtctacagctctggttaataattaattactcattattaattacacacttttcttggaaaatatttcaggagggtcacaagccccattgcataataagcccaaatctaaatgttggaggcgctctagatcaaaaggccagcaacgggaacactgggatcttgataaacggccgcgagattacgaaatctgagctgcaaatgcttaaggtttgaagcaatatactggtacctaattttgtaattcatgtgttttatctctaaccttttacatttcagttggcaggagttcaatgtgctggaaaacctcacttttgggtgaatgctgatgggacttaccaagaggaaggacaaaaaacagttaaaggcaagatttgggataaggtaattctgggattcatcttgtagttgccctgtaattcgtcagaggaaactaaccaaagttacatatgttctgcattccttggcagcctattgtgaagctgcttagtcctgtcctatcactgccaacgcctaacaaagcaaataatcaatgcggtgaagagccagtgaatgtggtaaatcgacccatccctgactacttggagcaaaggaccattcagaagctcctgttggttggatcagggacaaacaccatactcaagcaggtacaaatatattgatgtgtttatgtagataagttgatcactgaattagcatcaccatccaattacctttatttaccttggagtattaaaggcaagattcacttcacacgaacagaaggacttagttttatggttcgctgcctgttgtttgcaatatcaatatagcaactgatcttgaatccatcaaaccttaggccaagttcttgtacaagagcagaccattttctgtagaggagtgtgaagatctcagacttatcatacaaagtaacatatacaactaccttggtatactacttgaagggcgtgaaagatttgaagaggaagctatagctgacagaagaactacctgccaaagtgatccttctagctctggtatgacagtcgtattattatgttcttttggctatccaccttaattctttgctgcataaattcacatatttatatcagcaggagacttgcaattgtttgattttagtgaaacatatagactgctagcctcttccacagaccatctagaatttatttttgtgtttcttttgcaggccattgtgaaccagagctttgtaatgacattactgagtactatattgctccacgcctgaaagcattctctgattggattctaaaagctatggccataggtaatcttgaagacattttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgctattcaagctacatataaccggagaagtgaactgccattccttccatctgctgctagttatttccttgacaaggtactattgttgttccattgttgtttgaacacttgacctcggttgatgcactgtttctacatctgtttcatgtcagatggcagtgtctaagtagtgctgagtcatataattacaattgctcattctttaacattgttatttgggatgatcaggctgttgatatttcccgaacggaatatgagctctctgatatggatatcctttacgctgatgggataacatcctcagatgggttagcatctacagatttctccttcccacaactggctttggacgggcggggttttgatgagccagatccacaagacactttgctaaggtctgttcttaagtcactgaaaagggcatggtagtctaaataacctgtgtttctagtctttctgtaactttcatctttgttaatgataacagtatgaacaatgaaacattttgttctattttcaggtaccaactaataagaataaacaacaaaggattgcatgagaactgtaaatggctgcaaatgttcgatgatgtgaggcttgttatcttctgtgttgcggtcagcgactatgatgagtactacgaggatgcaaacggcaatgttgtgaacaagatgatggagaccaggcagctatttgagagcattgcccttcatccgatatttgagcagatggatttccttctacttctcaccaagtttgatatcctagagcagaagatcggcaaatctcctttaacatcatgcgactggttcagcgacttcactcccctggtaagccgcaatctgatcaacggcaccagcaaaagctcgcggggcagctccactggctcgacattggcgcagatggcgggtcactacattgcggtgaagttcaagagcgtattccagtcgttcacggagcggaaactctacgtgtcctacgtgaacgccctggaccaggagtcggtccgctccgcgatccgctatggaagggagatcatcaagtgggaagacgagaagcccgtgtttgggtccagcgagacgacatacagcgaggagccgagctcctactctcactgacccctcctccctcaacaacatttgcttttgaggtgtaaatagctgtgaatgcatttgctctcccagcaaccttttttccttttagagttttctcattttttccccttttgttgcctagcaagatcatcggcttgtatggttgtttagttgtttacaagtagggtgagatgcaagaggtctgcctgattctgattcttgtatgtatggaattataatctttaaattaacatggtgctgattcttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0593000, RefSeq:Os12g0593000