BGIOSGA008679

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Revision as of 03:19, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008679| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008679, complete gene.| tag = OJ1626_...")
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Gene Name

BGIOSGA008679

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008679, complete gene.

LocusTag

OJ1626_B09.4

Ensembl Transcript ID

BGIOSGA008679-TA

Ensembl Protein ID

BGIOSGA008679-PA

Length

4128

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27182780..27186907

Sequence Coding Region

27182780..27182820,27182920..27182996,27183874..27183938,27184048..27184094,27184788..27184863
,27185042..27185109,27185727..27185796,27186043..27186128,27186283..27186345
,27186417..27186482,27186859..27186907

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27182780..27186907 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27182780..27186907 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGACAGCCAGTACTCCTTCTCCCTCACCACCTTCAGCCCGTCGGGGAAGCTGGTGCAGATCGAGCACGCGCTCACCGCGGTCGGATCCGGCCAGACGTCCCTCGGGATCAAAGCTGCTAATGGTGTAGTTATCGCCACTGAGAAGAAATTGCCTTCTATTTTAGTCGATGAAACATCTGTGCAAAAGATTCAGTCATTGACTCCGAACATTGGAGTTGTCTACAGTGGGATGGGTCCCGATTTCCGTGTTCTTGTGAGAAAAAGTCGGAAACAAGCACAGCAGTATTATCGGTTGTACAAGGAAACTATCCCTGTTACTCAGCTTGTCCGAGAAACTGCTGCTGTTATGCAGGAGTTCACACAATCTGGTGGTGTAAGACCATTTGGAGTATCATTATTGATTGCCGGGTACGATGACAATGGCCCACAGCTGTATCAGGTTGATCCCTCAGGATCATACTTCTCCTGGAAAGCATCAGCTATGGGGAAAAATGTCTCCAATGCAAAGACATTTCTTGAAAAAAGATACACAGAAGACATGGAGCTTGATGATGCCATCCATACTGCTATTTTGACTCTGAAAGAAGGATATGAGGGTCAAATCTCAGCCAACAATATTGAAATTGGAGTTATTCGATCTGACCGTGAATTCAAAGTTCTAACCCCGGCAGAGATCAAGGATTTCTTGGAAGAGGTGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGVIRSDREFKVLTPAEIKDFLEEVE</aaseq>

Gene Sequence

<dnaseqindica>1..41#141..217#1095..1159#1269..1315#2009..2084#2263..2330#2948..3017#3264..3349#3504..3566#3638..3703#4080..4128#ATGGGAGACAGCCAGTACTCCTTCTCCCTCACCACCTTCAGGTATGTGCTGCCTTGCGCCTCCCTCGCCCGGAGATCGGGCGTGATCTGGTGCGGTTTCGGTTTCGTCATCTGTGGTTTTTGTGGCGATTTCGTTTGCAGCCCGTCGGGGAAGCTGGTGCAGATCGAGCACGCGCTCACCGCGGTCGGATCCGGCCAGACGTCCCTCGGGATCAAAGGTGCGTCCCGTGAAGCAATCCCTTCTCTATACTTCTATTGCGTTATGAGAATCGAGAAGGGGAGGGGAGGTTTGAGATTTTGGCTGGTTCGGTTCACATGACGAAGTGGCGCTTGTTGGGGATTTTGCACTTTTCGCATAACTTTTATTCGTTGCTACGGCTTAGGTTACTAATAGGTGCCATGTTACTTGCATCTGCTATTCTGCTTTAGTGATACTTGGGAATTTTGTAATGTTTGCTTCGTTTTCGCTTACAAATGCTTGTGGATGCCATGGAAAATCATTATTAATCTACATAAATGTATGTCTTGTAACAGCAATGGCAAGTGCTCCCCTTTATAACCACATAAGAAATACAAGCTGCTTGGTTTCATCTGTGATGATGAAGTTTTCTATGCCAATTTACGGCGCTGAATGTATATGCTGACCTAGTTTTCCCATTAGTAGTTGTATGTGTGTGCAGTCTGATCTAGTGCCTATTAGGGTTTGGAAGCCCATTTTAGTATCAGTGCAAAATTCTAATTTGTTTGCCCTGTCAACGTCCACCTTACTGGTAGGTTTACATACCCTTAAAATCAGCTTTTGTTGCCACTTGTCAGTATTTATGCAATTTAAAGTCTTGGGGTTTTAGCCCATGAATTTTGTTTTGGTATATAAAAAATTGAAAGAAACTATTTGACATGCGTTCTTCACGCTGATAGATGTAATTGTTGTATGTAATAAATTTGTGGTGTAGAACATACTGCATATGTTTTTACCAGATTGTTCTATCATATGTTTTTGTGTAGTTACTGCTCAGAGACTACAGTCTGTTGATTCTCTTCAGTTCCCTTTTAGCCTAGTTTATTGATTCTGAGGTATATTTGTTATGTTTGCAGCTGCTAATGGTGTAGTTATCGCCACTGAGAAGAAATTGCCTTCTATTTTAGTCGATGAAACATCTGTAAGTCTAACATCGCTCTTAATGCTGAATTCCTCTTTTAGTGAGTTGCGACATGCTATTCGTTGTTTGTTTCTCAGAAGCACTAATACATAGTTATATGCAAATTCAGGTGCAAAAGATTCAGTCATTGACTCCGAACATTGGAGTTGTCTACAGGTAACCTTTTACATTGGCTTCATTGTTGGAATACATTTCTATTTTGTATATATTATGGTTGTCATGTACATGCTATTGTAAGTTATTCCAACTTGTTATTCTATTAGTTATGTTCTTGATCCTTTATATGAGCACTAGCTGTGCTGTAAGCTTCTACAATTTTAGCAGTACATAGTTCACAGATGAGCTATTGTGTAAGAATATAATGGTAATATAAATAATTGGTTTGAACCGCCTGGTTTTAGTGAACAAGTGACACAGTTCGCCCTGAGAAATTTGCACATATTAATCTTCCCTAAAAAGGCACAAATTAAAAATATCTATCTTGCTCTCCAAACTTTGCAAGAGGATAAGTGCATTGGTATTTTACTGTGTCTTATAGTTATATGCACATCAGATTGCAGTAACTTTGGAAATCCATATCTAGACATTTGAGGCAACTTGGTGAATGAGCATGCAGATCTCTGGATTTTTGTTGATTAGCTTGTAAGGTATTTATAGTTGATCTATTCACTGGACTAAAGCATAAAAAATAGTTCTTCAATCCATCTGCAGCCTTGTACAGTGGTCTGAGAGAACAGCTGCATTCTGTCTTTAAATTATTTGTTAGTTTGTTACATCTCTCAGCTTGCTGCTGTTAATATCAGTTGCAATTCAATAATACATGTTTACTTACCTGTGCACTTCTTTCAGTGGGATGGGTCCCGATTTCCGTGTTCTTGTGAGAAAAAGTCGGAAACAAGCACAGCAGTATTATCGGTTGTACAAGGTGGTTTTTTACAGTTCATTTGATTTATACTTCAGATAACTATTGTATGTTTTGTAAAGACATATATTTTTCAATAAATTGCTATTTCAGATAGCATGCAATTTTTCATGTACGACAGTCATGATCTTTTCCATCATTTACTTATTTCTCATGATTGTTCTTCCTTTTTCTAATGCAGGAAACTATCCCTGTTACTCAGCTTGTCCGAGAAACTGCTGCTGTTATGCAGGAGTTCACACAATCTGGGTATGCTACTTCAGAGTTTTCCATTTCTATCAATGATATTGTTAAATAATATATTCTTGCACTTGTTCGACCTAATTAATTTGTATGGATATATTTGTGGAATATTTTTACTATAACTTAACAGTACCATTCGTTCAATATTGTATTCGATAATTCAGATGTTCAGTACCGAAAACTTTCAACATGTACATCACATTGATGTGTGTTGATGCAGAAGCTTGTTAATTGACCTGCTGGGAAGAATATATATGATCTGCTGTGTGAACTTCCACTTGGATTTTCACTGGATGGATAAAATTTTATTGAAATTGGGCCATTGAGAATTAAATTGCTAATGTAACCAAGCAAGTTGGGTAGTTTCATACCTGTAACACATAGGATTTTCCAGTCATTTGCATTTTATAATTCACTTTGACATCATTGAAACAAAAAAGAAAAAAAACATCAGAGGAATAATTAAGACATACATCTTGTTATAAATCACATTACATGCTATGTGGTAGTTGGTTCTTATGTTGATTGGTGAATCCTGAAGTACAGTTCACTCCTTAAAGATATGAATATATGATGTAACCGAATTTCTGAGGCATGACTCACGGCCAACTTGTTTGTTGCAGTGGTGTAAGACCATTTGGAGTATCATTATTGATTGCCGGGTACGATGACAATGGCCCACAGCTGTATCAGGTATGCAGATAGCTGCGTTATAGGGGCTCTTTTTTGTTGCAACTGTTTCAAAATTAATGTGTACGTTGACCCTTGTCTCAATAATAAGCTGCAAAGTGTTGTTTGCACAAAGCATCTAATAGCAGATCACCACTATTAGTTGTGCTAGTTTTGTTCTTCTGGACTGAAATTTTACCTGTCAATTTGTCATATTTTGTTATGGTGTAAAATTGGTATAATGCCAGATGTGCTGTATTATTTCTACAGGTTGATCCCTCAGGATCATACTTCTCCTGGAAAGCATCAGCTATGGGGAAAAATGTCTCCAATGCAAAGACATTTCTTGAAAAAAGGTACATAGCATACCACTAATATTGTATTGTACTACACTCTGTTTTCCTCAATCTGATCAGAAATAAAGTGGATTTGTTTACGAGGATATCTTCTTTCCAAAGTTGTATGACTGCACTTGTACTGTTGTTCAACCTCTTTATGTCCTCATTTCAGATACACAGAAGACATGGAGCTTGATGATGCCATCCATACTGCTATTTTGACTCTGAAAGAAGGGTATGTCTTGTAGGTGCTTCTGTTTCTATTTCCAGAACATCCTGAGTTACTGACTGATTCGGGGGTTGCAGATATGAGGGTCAAATCTCAGCCAACAATATTGAAATTGGAGTTATTCGATCTGACCGTGAATTCAAGTATGTCATACAGACTTGATCAAGCTGTTTTTTACTGCCACGTATATGCAATGCAACTTCTGTCTTGTGAACATGCCATAACAATTTTTATCTGTTCCCTACCTTGTTCATCTTGACAGCTATGGGACTTTTAAATCTTCATTAATAGTCAAAGTTATAGTTCTCTTTTTCCATGTACACCCATGTTGGGTGTAGAGGCTGGGTTTTACCTATCCATCATTATCTTAAAGAAATTATAGTTCTCTCGGTCATGTAGTTGGTATAAGTAGTTTCAAAAGAATTTGTGTCATTTGTGCTTCTACTCAAAGCTGTTTGATTTGATTTTTCCCCCTCATTCAAGTGGTTGCTGACAAGTTACTTTCTGTACAAAATGCAGAGTTCTAACCCCGGCAGAGATCAAGGATTTCTTGGAAGAGGTGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008679

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008679&oldid=62231"